| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01970 |
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| Symbol | |
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| ID | 3255760 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | + |
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| Start bp | 573200 |
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| End bp | 576729 |
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| Gene Length | 3530 bp |
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| Protein Length | 1072 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638254846 |
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| Product | pre-mRNA splicing factor, putative |
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| Protein accession | XP_569125 |
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| Protein GI | 58263430 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAGAT CACCGTATAG ATCATCGAAC AGGAGCTATC GCAGCCCCTC GCCTTCCCGG
TACGACCGAT CTCACCCGAG CTCCTCTTCT AGACGTCAAG ACGACCGAAA AGCCTCGAGG
TACGACGACG ATTATTCGAG GGACCGAGAG AGAGATAGGG AAAGGGAAAG GGATAGGACT
AGAGACTACA GGGATAGAGA TAGGGATTAT GATAGGAGGC GAGATAAGGA CAGATATCGT
GATGATGACC GAGACAGACG GAGGAGAGAC GATAAAGATG ACAGGCGGCG AGAAGAGAGG
GATCGAGGTT CTGACCGCAA GAGAGATTCT GAGAGGAGAT CTCCTATGTC GACCATTCGT
GTGGATCCTA TTGTATCATT AGCTTCACCT GTTCCGGAAA CTGAAGAGGA GAAGAAACGA
AAGGCAAAAG AGAGACTGGA AACTTGGAAG CGCCAGCGTG CCTTGAAGGA GGGCAAGTCT
GCAGCTGCAA CACCTGAGCC GAAGAGCACT GCACCTCCCC CCGTTACCTG TGAGTGCAAT
TTGGCCTCCC TCTGTTGGAT CCATTACTAA TCGGGATACT GTAGCTGGCC TGCCGCCTAA
ACCTACCGCC TTTTCCCTCT CTCGTATCGG TCTCCCACTC AAACCCACAA ATCCAACGCC
ACTCAAACGT AGCATGGCTG CTCTTGACGA CGAAGATACA TCTGACCGCA AACTTCAGAA
GCTCGATCTA CCTGATTTTG ATCCTGAAGT CCAGTCAGGA GACGCGGCTC AGGTGGGCTC
CATTGGTGCA GACTTGGCAG TGGCGGATGG AGATGAAGAT GATGATACGG TGGTGAAAAA
GGAGGAGGAG AAGGAGGAGA AGATGGATAT AGACAAGAAA GCGGAAGAAG ATGAGGAAGA
GGACCCGTTG GATGCGTTCA TGAGAGACAA CGTGCAGCAG GTCGTAGAGG TGAACAAGGC
GGACGCCAAG CGAATGGGGT TGCGGGTTGC TGAGGATGGC AGCGACGACG AAAATCAGGG
ACAAGTCGTG GAGAAGGATA AGCTTGCCGA AGCGGAGGCG TTGTTGCAGT GCGTTTCATT
TTTCTCCAAA CCAAAGAGCA TATGCTTACA ACTCATTGAA GACAAGCTGC GGCTAAATCA
CGCAAGAAAG ATCTTCCTCC TCCTGACCAT TCCAAGATCG ACTATGAACC TTTCCGCAAG
GCTTTCTACG TACCGCCTGT TGAAGTATTG GAGATGGATG AGGAAGAGGC TGAGTTAGTG
CGTTTGGAAA TGGACGGCAT CAAAATTCGA GGACAGGATG CTCCAAAGCC AGTTAGGAAC
TGGGGCGCCT TTGGCCTGCC TCAGGGGTGG TAAGTCTATC ATCTTATTGT ATGCGAAATA
CAATATTCTG ACGTTTAATA GCCTCGATGT AATCAAGCAC CAAGGTTGGG AAACACCCAC
GTCCATTCAA GCTCAGGCTA TCCCAGCTAT AATGTCCGGC CGAGACGTCA TCGGTATTGC
TAAAACCGGT TCCGGTAAGA CTGTTGCTTT CCTCTTGCCA ATGCTCCGTC ACGTTCGCGA
CCAAAGGCCT GTGTCCGGTA GTGAAGGGCC TATTGCGGTT GTCATGTCAC CTACCAGGGA
GTTGGCCTCT CAGATTTACA AAGAATGCCA GCCCTTTCTT AAGGTGCTCA ACATTAGGGT
AAGTTCAGGT CTTCCTAATT AAAGACTGTC GAGCTAAGTT TTGCATGTAG GCTTCCTGCT
GCGTCGGCGG TTCGTCAATT AGTGAGGATA TCGCTGCCAT GAAGAAAGGT GCCGAAGTGG
TTATTTGCAC TCCTGGCCGA ATGATTGACC TTCTCACCGC CAATAACGGC CGAGTCACAA
ACGTCCGACG CACCACTTAC ATCGTTATGG ATGAGGCCGA CCGAATGTTT GATATGGGCT
TTGAACCTCA AGTCATGAAA ATTATCAATA ATGTTAGACC GAGCGCCCAG AAGGTTCTAT
TCTCAGCAAC ATTCCCCAAG ACAATGGAAT CACTTGCGAG GAGAATTTTG GTGAAGCCTT
TGGAGATCAC AGTCGGAGGC AGAAGTGTTG TTGCACCCGA AATTGACCAG CGTGTCGAAG
TGCGTGATGG TGATACGAAG TTCACACGTT TGCTTGAAAT TCTTGGTGAG ATGGGCGAGG
AGCACAAGGA CGAAGATGAT TTCCGCACCC TTATCTTTGT AGACCGTCAA GAAAGTGCGG
ATGATCTATT TAGAGAACTG CTACAGAGAG GTTATGTCTG TGCTTCACTG CACGGCGGTA
AAGAGCAGGT CGATCGAGAT GAAGCGATCA AAAACTTCAA GAATGGTGAT GTGCCTATAA
TTGTGGCGAC TTCAGTAGCG GCAAGGGGTT TGGATGTAAA AGAGTTGAAG CTTGTCATTG
TGAGTTTCTC GTTTGTCCAT CATGAGGCTG TATGCTGATT CTTCAAAAGA ATTATGACGC
ACCTAACCAT ATGGAAGACT ATGTTCATCG TGCTGGCCGA ACAGGTCGTG CGGGGAACAA
AGGCACTTGC ATAACATTTA TCACGCCGGA GCAGGAAAGG TTCTCCGTCG ACATCGTACG
AGCTTTGGAA GCGAGTAAGG CATTCATCCC CGATGACCTG AAAAAGATGT CGGATTGTAA
GTAGACTTTT TACCCTTATG ATGAAAATCA CTGATGGTAA ATTAGCATTC CTCGGTAAGA
TCAAGTCTGG CAAAGCCCGA GCAGCTGGTA GTGGATACAG TGGTAAAGGT CTCGAGCGAA
TCGAACGCCG TCGGGAGGAG AAAGACCGAG CTGAAAAGAC CACCTACGGC GATACGTCTG
AAGCCCTGTC ACTCTCCTCG CGTGAGGGTG CTGTCATCCC CTACAAAGCC AAGACGAATG
AGTTCAAGCC TCCAGAGACC TCTCACAAGG GTGAAGCAGA CTATACATTC ACAGAAATCA
AGGTTGATAT CGTCAATGGC CCTGCGCCGG ACCGCGTGTC CTCTCAACCT GTATTTAACC
CGAAGAACGC CGTGGCCTCT TTGCCAGCAC AAACACTGGC GGCACTGGAG AAGGCAAAGA
AGGAGGGCCG AGGCGTAGAT GCGGCGAATC TGGCAAATGT GGTGGCCAAA CTTACCCAAT
CTATCGAACT CACCAAAGCC GAGAAACTTG GTCTGGCGGC AGCCACCTCT GCACCTCGTC
TTGCTCCTGG TGCGAGAACA AAAGATCCCG ACGCTACCGA CTGGCATGCT ATTTTCCCCA
TCAATGATTA CCCTCAAAAG GCTCGTTGGA AGGCTACCAA TAAGGAGCAA ATGACTTTGC
TGCAAGAAGT TTCAGGAGCA AGTATCACAA TGCGAGGCAG ATTTTACCCG CCTGGGGAGG
AACCTGCGTT GGGTGGTGAA CCCAAGTTGA GTCTGTTGAT AGAGAGCAAC GACGAAATGA
GAGTGAGGGC TGCTGTAGAA GAAATTCGAA GGGTGCTGGT CGAAGGATCA GTACAAGCAC
TTAATGCGGT CGATAGAGCG GGTGCGAGTG GCGGGAGGTA CGCTGTGTAG
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| Protein sequence | MPRSPYRSSN RSYRSPSPSR YDRSHPSSSS RRQDDRKASR YDDDYSRDRE RDRERERDRT
RDYRDRDRDY DRRRDKDRYR DDDRDRRRRD DKDDRRREER DRGSDRKRDS ERRSPMSTIR
VDPIVSLASP VPETEEEKKR KAKERLETWK RQRALKEGKS AAATPEPKST APPPVTSGLP
PKPTAFSLSR IGLPLKPTNP TPLKRSMAAL DDEDTSDRKL QKLDLPDFDP EVQSGDAAQV
GSIGADLAVA DGDEDDDTVV KKEEEKEEKM DIDKKAEEDE EEDPLDAFMR DNVQQVVEVN
KADAKRMGLR VAEDGSDDEN QGQVVEKDKL AEAEALLQQA AAKSRKKDLP PPDHSKIDYE
PFRKAFYVPP VEVLEMDEEE AELVRLEMDG IKIRGQDAPK PVRNWGAFGL PQGCLDVIKH
QGWETPTSIQ AQAIPAIMSG RDVIGIAKTG SGKTVAFLLP MLRHVRDQRP VSGSEGPIAV
VMSPTRELAS QIYKECQPFL KVLNIRASCC VGGSSISEDI AAMKKGAEVV ICTPGRMIDL
LTANNGRVTN VRRTTYIVMD EADRMFDMGF EPQVMKIINN VRPSAQKVLF SATFPKTMES
LARRILVKPL EITVGGRSVV APEIDQRVEV RDGDTKFTRL LEILGEMGEE HKDEDDFRTL
IFVDRQESAD DLFRELLQRG YVCASLHGGK EQVDRDEAIK NFKNGDVPII VATSVAARGL
DVKELKLVIN YDAPNHMEDY VHRAGRTGRA GNKGTCITFI TPEQERFSVD IVRALEASKA
FIPDDLKKMS DSFLGKIKSG KARAAGSGYS GKGLERIERR REEKDRAEKT TYGDTSEALS
LSSREGAVIP YKAKTNEFKP PETSHKGEAD YTFTEIKVDI VNGPAPDRVS SQPVFNPKNA
VASLPAQTLA ALEKAKKEGR GVDAANLANV VAKLTQSIEL TKAEKLGLAA ATSAPRLAPG
ARTKDPDATD WHAIFPINDY PQKARWKATN KEQMTLLQEV SGASITMRGR FYPPGEEPAL
GGEPKLSLLI ESNDEMRVRA AVEEIRRVLV EGSVQALNAV DRAGASGGRY AV
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