| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01880 |
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| Symbol | |
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| ID | 3255795 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | - |
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| Start bp | 551367 |
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| End bp | 555364 |
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| Gene Length | 3998 bp |
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| Protein Length | 1109 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638254837 |
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| Product | valine-tRNA ligase, putative |
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| Protein accession | XP_569118 |
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| Protein GI | 58263416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.332908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCACCTTAC CTTCTCGATA ACGGTGTATG CTCCGTCACG CACTGAGATC AGTACAACGC
ATTTTAACCC CAAGCCCTAT TGTGTACCCA CGCCTACAAA GAACGTACGC AGCAATGTCC
GCTGAAGAAA CCAAGGTCCC TTCTCAAGAA TCCTTGCCCG TAGAGGAGAT CAACCCCGCC
GGCCCGCAAC CAGCAATCGC TACCGAGGGT GCCGCTGAAA AATCGAAGAA GGGCGGTGAG
TAACATAAAT GTAGATGTAA ATAGTCGCTG AATATACATT GTATAGCCAA GAAGGAGGCC
AAACGACTTG AAAAGCTCGC CAAAGCTGCC ACCAAGACTT CCGCTGCACA ATCTCAGGCC
CCCAAGAAGG AAAAGGCTGA GAAGAAGGAG AAGAAAGCCG AAGTTCCTGC TGAAGCTTGG
GTTGACACGA CTCCCAAGGG CGAGAAGAAA GGTTAGTGGT CTTGTGTGAT CGTGGCAATG
TTCAAGCTAA TGTAATTGAT TAGATGTCTC TGGTAACTTC CCCTCTGGCT ATGACCCTAT
TCAGGTCGAG GCTGCCCATT ATGATTGGTG GAATGCCAAG GGGTTTTTCA AGCCTCGTTA
CGGCGCCGAT GGAAAGCCCT TGGACAAGGG AACTTTCTGT ATCACTTTCC CTCCTCCCAA
TGTTACCGGT AATTTGCACA TTGGTCATGC TTTGACCGTC TCCTTGCAGG ACGCTTTAAT
CCGTTGGTGA GTATTCTGAT GTTGATCATG TCACAAACTA ACTTTTTTTT AGGAAGAGAA
TGCAGGGTCA AACTGTCCTT TATCTTCCCG GATATGACCA CGCGGGTATT GCTACACAAG
CAGTCGTTGA GCAACGTCTT ATGAAGACTG AGGGTCACTC TAGACATCAT TACGGCCGAG
AAAAGTTCCT TGAGAAGGTT TGGGAATGGA AGGACCAATA CCAGGGCAAG ATTACCAACC
AGATGACTCG TTTAGGTGGT TCTTTCGATT GGGACAAGGT GGCGTTCACC ATGGACGACG
TGAGAAGTAG ACGACTGTTC CAGAAGGACC AAGCTGACAG AGTTTCTTCT AGAACTTGAG
TACCGCCGTT AGAGAAGCAT TCGTTCAAAT GCACGAAAAA GGTCTGCTTT ACAGAGCTAA
CCGACTGGTG AACTGGTGTG TTTACCTTAA CACCTCTCTT TCCAACCTCG AGGTAGGTTC
TCTCTTCACC GAAGTTTCAA TTTTCCGCTA ATTTGCAATC CGTATTAGGT CGATCAACTT
CACCTTACTG GCCGAACCCT TCTCAATGTC AAGGGCTACG ATGCCAAAGA GCGTTTCGAA
TTCGGTGTCA TCACTTCTTT CGCTTACCCC ATCGAGAACT CTGATGAACG TATCATCGTC
GCTACTACCC GTCCTGAAAC TATGCTTGGT GATACCGCCA TTGCTGTGCA CCCTGATGAC
CCTCGCTACA CTCATCTTCA CGGCAAGTTT GCAGTTCATC CTTTCAACGG CAGAAGGATT
CCCATCGTCA CAGATGCCAT TACTGTCGAC ATGGAGTTCG GTACCGGTGC CGTCAAGATC
ACCCCTGCTC ATGACCCTAA TGACTTTGAG TGCGGTATGA GGAACAACCT TGAATTCATC
AGCCTGATGA ACGACGACGG TACCTACAAC GAGAACGCAG GTCCTTACAA GGTCAGTTTA
TGATGTTGCC GTGACTCACT GGATGTGCTG ATAAGGGAAA TAGGGAATGA AACGATTCCA
TGTTCGAAAC GCCATCGTCA AGGACCTTAA GGAGAAGGGA CTGTACGTCG AGCAAAAGGA
CAACGAGATG CAAATCCCCA TCTGCTCGTG AGTGTTTGTT CTACTTTGCA TTTGGGCCGG
GATTAATTTG AGTATCAGTC GATCTGGCGA CGTCGTCGAA CAAATCATCA AGCCTCAATG
GTGGATCAGC TGCAAACCTC TTGCCGAGGA TGCTCTCAAG GTGAATCGCT TGTATTTTTC
GTCGGTTTCT CATCTAAACC AAACTCCATA GCGAACCCGT GCGGGCGAAC TCGAGATTAA
GCCGAAGACG TCTGCCGGCG ACTGGGTACG ATGGATGGAG AACATGCAGG ATTGGTGTAT
CTCCCGTCAG CTCTGGTGGG GTCACAGATG TCCTGCTTGG TTGCTCAAAT TTGAGGGCGA
GTCTCCCGAC GTGCGTCTGG ATTCTTTCTT CTTCTCGTTA AAAAAAGTCT GATGTCTTAA
ATATTATAGA CTTCTGACGA CAAGAACTGG ATCGTTGCAC GAACTGAGGA AGAGGCTCAG
GAAAAGGCGA AGGCCCGTGC TAACGGCAAG AACTTTATCT TGGAGCAAGA TGATGACGTG
CTTGACACCT GGTTCTCTTC CGGTCTCTGG CCTTTCTCCA CTATGGGGTG GCCCAACAAG
GTATGCGTAT CCAAGCTTAG GAGAGAATGA TGACTAACAT AAAGAAAGAC ACCCGACATG
GAGCATTTCT ACCCCAACTC CATCCTCGAA ACTGGTTGGG ACATTCTCTT CTTCTGGGTT
GCGCGTATGG TCTTCTTCGG TAACACCCTT ACCAACGTCA TGCCCTTCAA GGAAGTCTAC
TGCCACCCCA TGGTCCGAGA TGCCTATGGC CGAAAGATGT CCAAGTCTTT GGGTAACGTC
ATTGATCCTC TGGACGTGAT CACTGGCCAG AAGCTGGAGA AGCTGCACAA CGACTTGAGG
ATGGGCAACC TTCCCGAGAA GGAAATCTTG AAGGCTGAGG AAGGCCAGAA GAAATTGTAC
CCCAAGGGTA TTCCTCAATG TGGTACCGAC GCCTTGAGAT TTACTTTGTG TAACTACACA
TCTGGTGGTC GAGATATCAA CATGGACATT GGTCGTGTGG AAGGTTACAG GAAGTTCTGC
AACAAGCTCT GGAACGCGAC CAAGTTCTGT CTCTTCCGAA TGGACCTTGT CGATTTGCAG
GGTGTCAGGC AGACAAGTGC TTTCGTCCCC AATGCGTCTC ACTTGCCCAC TGGCAAGGAA
GGTCTTGTCG AAAAGTGGCT TTTCCACAAG CTCAACCTCG CCAGCGCCGC TATTTCGGAC
GCCCTCGAAA ACCGGGACTT CTCTGAAGCT TCTACTGTCG CCTACCAATA CTTCCTTAAC
GATCTCTGTG ACGTCTATAT TGAGGCTACC AAGCCCATCT TCGAGGCCAA CTCTGATCCT
GCTGCCAAGC TCTCCGCCCA AAACACTCTC TATACATGTT TGGAAGCTGG TCTCAAGTTG
TTGCACCCCT TCATGCCTTA TGTGACTGAA GACTTGTGGC AGCGTTTGCC TAGGAGGGAA
GGTGACTCTT GTGAAACCAT CATGTTGGCT CCTTTCCCCG AGAAGATCCC AGAACAAGAG
TTCCCCGCAG AAGTTGCTAG CTTTGACCTC GTTGTTGACT GTATCAAGTC TGCTCGTTCG
GTCATTGGTC TTTACAATCT CCCCACCAAC GGCAAGACTC CCGAAGACAA GATCACTGTG
ATCATTCAGG CCCGTAACGC CGAGCAACTC GAGTTGTTGA AGTCTGTGGA GACTGTGATT
GTTGGTTTGA CAAAGGGTTG CGGTAAGGTT GAGTGGATTC AGGAGGACAG CGAGATTCCT
CGAGGCTGTG GTACTGAAGT CGTTACTACC GACATCAGTG TACACATTCC TGTCCAGGTA
CGTCATCTTT CAGTTATAGA AGCAACTGGG TCGGTACCCC GCTGACATAT CTTTGTTCCT
TTTTCTTACA GGGCAAGGTC GACGCTGCTT CTGAGATTGA TAAGCTCGAG AAGAAGTCCA
TTGTAGTCGA GGGACAAAAG GCCAAGCTGC AAAAGGTCAT TCAACAACCC AATTACGAGA
AGACTGTCAA GGAAGACGTG AGGCAGCAGA ACGACGAGAA GATGGAAAAG ATCGAGGTTG
AAATCGAAGC GCTTAGGATG GCCATTGAGA GGTTCAAGGG TCTTTTGTAG ATAGGTTAGA
GATCGGAGGA GTGTGAAATG CACGAGACTG TTCCCAAA
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| Protein sequence | MLRHALRSVQ RILTPSPIVY PRLQRTYAAM SAEETKVPSQ ESLPVEEINP AGPQPAIATE
GAAEKSKKGA KKEAKRLEKL AKAATKTSAA QSQAPKKEKA EKKEKKAEVP AEAWVDTTPK
GEKKDVSGNF PSGYDPIQVE AAHYDWWNAK GFFKPRYGAD GKPLDKGTFC ITFPPPNVTG
NLHIGHALTV SLQDALIRWK RMQGQTVLYL PGYDHAGIAT QAVVEQRLMK TEGHSRHHYG
REKFLEKVWE WKDQYQGKIT NQMTRLGGSF DWDKVAFTMD DNLSTAVREA FVQMHEKGLL
YRANRLVNWC VYLNTSLSNL EVDQLHLTGR TLLNVKGYDA KERFEFGVIT SFAYPIENSD
ERIIVATTRP ETMLGDTAIA VHPDDPRYTH LHGKFAVHPF NGRRIPIVTD AITVDMEFGT
GAVKITPAHD PNDFECGMRN NLEFISLMND DGTYNENAGP YKGMKRFHVR NAIVKDLKEK
GLYVEQKDNE MQIPICSRSG DVVEQIIKPQ WWISCKPLAE DALKRTRAGE LEIKPKTSAG
DWVRWMENMQ DWCISRQLWW GHRCPAWLLK FEGESPDTSD DKNWIVARTE EEAQEKAKAR
ANGKNFILEQ DDDVLDTWFS SGLWPFSTMG WPNKTPDMEH FYPNSILETG WDILFFWVAR
MVFFGNTLTN VMPFKEVYCH PMVRDAYGRK MSKSLGNVID PLDVITGQKL EKLHNDLRMG
NLPEKEILKA EEGQKKLYPK GIPQCGTDAL RFTLCNYTSG GRDINMDIGR VEGYRKFCNK
LWNATKFCLF RMDLVDLQGV RQTSAFVPNA SHLPTGKEGL VEKWLFHKLN LASAAISDAL
ENRDFSEAST VAYQYFLNDL CDVYIEATKP IFEANSDPAA KLSAQNTLYT CLEAGLKLLH
PFMPYVTEDL WQRLPRREGD SCETIMLAPF PEKIPEQEFP AEVASFDLVV DCIKSARSVI
GLYNLPTNGK TPEDKITVII QARNAEQLEL LKSVETVIVG LTKGCGKVEW IQEDSEIPRG
CGTEVVTTDI SVHIPVQGKV DAASEIDKLE KKSIVVEGQK AKLQKVIQQP NYEKTVKEDV
RQQNDEKMEK IEVEIEALRM AIERFKGLL
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