Gene CNB01790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB01790 
Symbol 
ID3255779 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp531052 
End bp533801 
Gene Length2750 bp 
Protein Length657 aa 
Translation table 
GC content48% 
IMG OID638254829 
Productpeptidyl-prolyl cis-trans isomerase, putative 
Protein accessionXP_568847 
Protein GI58262874 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTTTCGGC GACAACTAAT TTGTTTATCT CGTTCCCTTA CATCGCTTTG AAGCCATTAA 
CCATGTCTGA AGGAGCTGGT TCATCGTCAA ATCTTGGCAA GAGACCCCGT GACGGTGAAA
ACACCTCTCC TGCTCCGGAG AATGTCAACA ACAACGGATT AGAAGTGCCA GAAATGCCTC
CAGCCGATAT GGAGGATTCA TCCGATGATG AGATCGGTCC CATGCCTGGA GGAGACATAG
TGATATCAAA GGGGAGAAAG AAAAAGCGCA CTGGTGAGCT TGTCTTGCTA CTTCACAGGC
CACAGACAAT CGAACTAATG ATATTCAGTT CTTCCGCATG AAAAACTCTA CTTGGCGTCT
CTCCCTGATA CCGACCGCTA CTACAAGTCT TTTATGCACC GGGAACCCCT AAACTCTATT
ACAATGACCA GGTGAGGAAT TATCGCTTCA CATGCATCAT TAGCATCTGA CGAAACTAGG
ACAAACTTTG TCATTACGAC ATCCATTGAC GGCCATCTCA AGCTCTGGAA GAAGCAAGAG
CAGGGTATTG AGTTTGTTAA ACACTACCGC GCATCCCTTA AGGCCATTGT GGGCGTGAGT
GCCAGTGACG ATGGTAAGCT GTTTGCCACC GTTTCGGAAG GTGGTGAAGG CCGGGTGTTC
GACGTTGTCA ACTTTGGTAT GTTTCTTTGT AACCCTTTTG CAGTGACTAT TCTAAACATA
TTTGCAACTG CTAGACATGA TAAATATCCT CAAGTTCCCA TATACCCCCA AGGCATGTTG
CTGGGTCCAC GAGCCAGGGG CTGGGCAGCC ATTGTTGGCG GTTTCCGATG TCGCTAGCCC
GACTATCAGG ATATACGATG GAAGAGGGGA CGGCAAACCC TTATATGAGC TTACCAAACT
TCACCGGGCT CCTGTGCATC TCATGGTCGT GAGTATTCCT TCTATCTCTT ATATTTAATC
TGACAGTTAT ACCAGTACAC GGCCAAATAT GATTGCGTTG TCTCTGCCGA CGAAGACGGC
TTTATGGAAT ACTGGCAACC CAGCGAGCCT TGGGGCCTTC CTTCAGTCCC TGGTTTGTGG
CAGTATAAGT CTTCCACTGA TCTTTTCCAT TTCAAAAAGG TGTGTCCAAC CTGACCGACG
CTCAATTAAC AACAGTTACA GTCAAAGACC ATCCCCACCT GTGTCACGTT CTCTCCCAAT
TCCTCGCACT TTGTGACCCT TGCTCTTCCC TCCAGGGCTG TTCATATCTT CAACTTCCTT
ACGGGGAAGC TTACAAGGAC GTACGATGAA TCCCTCACGG CTGTTATGGA GATGCAACAG
GCAGATACGG CTGTTTTCAA GTTGGACGAC ATGGACTTTG GCAGGAGATT GGCGGCTGAG
AGAGAACTGG ACAGAAGTGA AAGCGGACCG GGAGGGCTGT TGAGGACAGC GAATGCGGTA
TGGGACGAGA GTGGTAACTT TGTGCTCTAT CCAACAATGC TGGGTATCAA GGGTAATTGA
CCAAGCATGA CCCAAAGTAT CTCCCAAGCT GACGTCGATT AGTGGTCAAC ACCGTTACCA
ATAAAGTTGC TCGTGTGCTG GGAAAAGACG AAACACTTCG TTTCCTTAAC ATCGCCCTGT
ATCAAGGTGC CCCAGCTAAG AAGGGTGTGA CCACTGTCCA AATGGCGGCT TCAGCGAACC
CTTTATTACA GGACAAAGCA TCTCGAGACC CTCACCTGTT TGCTACGGCA TACCAAAAGC
AAAGATTCTA TCTGTTCGCT CGCAGTGACA AAGAGTGCGT ATCTTCCATT ATAGGTATTC
CCCTTGCATG TGTTGACATG GGGATGATGC AGGGAGAGTA AAGGCGAGCG TGACGTGTTC
AACGAGAGAC CTACAAGAGA GGAACAAACT GTGGCAGTTC CCGCGGAAGA GAAGAAACGT
CCTTCGGCCA AACGTTGCAC GATCCATACT ACCAAGGGTG ATATCTCTGT GCAACTCTTC
CCTGACGAAG CACCCAAGAC TGTAGAGAAC TTCATCACTC ACGCCCGAAA CGGTGCGCTT
CATCCAATAT TGCTTCTAAT ATTGCTTCTA AATTGGTATA CTAAACGAAC ACCTAGGCTA
TTACAACGGA ACAATCTTTC ATCGTATTAT CAAGAAATTC GTGAGTATAT TGTAGCTTGA
AAGATTCAGT TGGTTAAATG ATGTCTAGAT GATTCAAGGT GGCGATCCTT TTGGAGTAAG
CGGTTCCTCT TCAATCGGGC AAGGGCTCTG GGCTAATGTG ATCTGCAGGA CGGTACCGGT
GGCGAAAGTA TTTGGGGTGG TACATTTGAG GACGAAATCT CTCCCAGGCT TAGGCACGAT
CGACCGTACA CCCTTTCAAT GGCTAATGCA GGTGCGTCGA CCGTTGCTGC TTTTCCCGTA
TGAAGCTGAC GCAGTACTGC AGGACCGGGG ACGAATGGAT CGCAGTTTTT CATTACTACA
GTACCTTGTC AGTGGTTAGA TGGCAAACAC ACGTGAGTCT GAAGATTGGC GCTCTTGTTA
GAATACCCTA ACATAGTGCT TTAGCGTGTT TGGCCGAGCA GTCGGAGGTT TGGACAGTGT
AGACGCCATA GAAGACGCGA AAACGGACAA AAACGACAGA CCGTTCGAAG ACATATCTAT
TAGTAGTATC ACCGTGGAGT GAATAAATTT TAAAGCCGAC TGAACAAATG ATGGTGAAAA
GCTTGTTAGT ATATTATACT GGCTCAGCAG CAATGCAACC TTGAAACATT
 
Protein sequence
MSEGAGSSSN LGKRPRDGEN TSPAPENVNN NGLEVPEMPP ADMEDSSDDE IGPMPGGDIV 
ISKGRKKKRT VLPHEKLYLA SLPDTDRYYK SFMHREPLNS ITMTRTNFVI TTSIDGHLKL
WKKQEQGIEF VKHYRASLKA IVGVSASDDG KLFATVSEGG EGRVFDVVNF DMINILKFPY
TPKACCWVHE PGAGQPLLAV SDVASPTIRI YDGRGDGKPL YELTKLHRAP VHLMVYTAKY
DCVVSADEDG FMEYWQPSEP WGLPSVPGLW QYKSSTDLFH FKKSKTIPTC VTFSPNSSHF
VTLALPSRAV HIFNFLTGKL TRTYDESLTA VMEMQQADTA VFKLDDMDFG RRLAAERELD
RSESGPGGLL RTANAVWDES GNFVLYPTML GIKVVNTVTN KVARVLGKDE TLRFLNIALY
QGAPAKKGVT TVQMAASANP LLQDKASRDP HLFATAYQKQ RFYLFARSDK EESKGERDVF
NERPTREEQT VAVPAEEKKR PSAKRCTIHT TKGDISVQLF PDEAPKTVEN FITHARNGYY
NGTIFHRIIK KFMIQGGDPF GDGTGGESIW GGTFEDEISP RLRHDRPYTL SMANAGPGTN
GSQFFITTVP CQWLDGKHTV FGRAVGGLDS VDAIEDAKTD KNDRPFEDIS ISSITVE