| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01780 |
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| Symbol | |
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| ID | 3255697 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | + |
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| Start bp | 526785 |
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| End bp | 530597 |
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| Gene Length | 3813 bp |
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| Protein Length | 773 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638254828 |
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| Product | signal transducer, putative |
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| Protein accession | XP_568846 |
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| Protein GI | 58262872 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCAAACCCTC GCAAACATAT AATAAAGAGC AATAGCGACA TGCCAATTAT GGACTATCTT
ACCGCCAACA CTGCCTCAAG AACTCCGACA GCATCCAGTT CGTCCATCGA CTCTCTGTCA
GGTTCATCGG ACACAAAGGC TTACAAGCAA TCTCGATCGA AGAGCTTTGG AGGTGTGTTC
AAGAGACATA GGCTATCATG GGGCGGTCCT TCCATTGAGA AGTTCAGATT GGGAGAGAGG
GATTCAAGCA ACGAGGACTG CAGTGGCGGC ATTGGGGGCA AACCCTACAA TGAACAACAA
CCGCTAGATA ATTTAAACGG TCAGAGTTAC GTCAACCACA TACGCAGATC GAGCGATAGT
AGCCAGTTGA TTCGTGACCT TAGGAAGGGT AATGAGTCAG AAGATTTCAA AGCAATTGAC
ACATACAGAT TACCTGGTAT TGGTTTCGTG GGCACAAACG CATCGAAGGA CGCGGTAAGT
TCTTGGTTGA AGTGCACACG AATCAAAGTA ATTCATATTT GTCTTATAGA TAGAGCGGCC
CCCATGGCGG TCCATCCGTT GCGAAGAATC ATCCGGGAGT CTACTCAGTC CTGGGTGGTC
CCCTGCCTTG TCCGATAGAC TAGTGCGTTT AGAGTTTTCT GCGTCGCTCG TGGTTGACTT
TACTCCAGTA TGAAGACCTG GCTCCAGCTC CACAAAACCC TTCACATCGA TATCTTACCC
CTCAGGATTC ATATTCTCTC CTTCTTACCT ATCAATCAAG CGCCGTTACA TCACATTCCT
CCTTCGACGT GTCCACTTCA TCCCGATGCC CCATAGATCA GAAGATGTCA TCTTCTTCAG
CTGATCAAGA GCTAAGTCCA GAATGGCACC AAATTGTCGA TAAATCTCTC TGTGATTCTT
TGGACAAGAT GGAGCAAAGA AGGCAAGGAC TGTGGTGGGA GATCATCAAG GGCGAGCGAG
AATATGTGCG CGACATGGGT ATCATGCATC ATGTGAGTAA TGATGTTTGG GAAGTTCCAT
CCTGACTTAC TTTGCCTTAG GTATTTATCC AGGAGCTGAG AGATTGCAGA CCGCCTGTAA
TTGAGTCCAC TAAGCTAGAA CCTTTCATTG CAGAAGTCTT CAGTACAGCT GTAATTCTGT
CCCATGCTCA TGAGACAATT TTAAGAAACC TGATGGAAAG ACAAAGGATT GAATGGCCTC
TTGTCAGTAT AGCCTAAGTT CGCAATCATA TAAAAGTGCT CACTCACAAA AAATCAGTTG
ACTACAGCGA CGGACATATA TCTGCAGATT ATGTTGGAGA TCGTCGATCC ATACGAGGCA
GTGAGTCACA TTATGTAGAC AAAGTACTGT TCCTTCCTGA CTTAGCTCAT AGTATATGAA
GAATTATCCA TTTGCAGAAG CCCGAGTGCG TCGAGAGTCT GTGAAAAATC AGGAATTTCA
CAAATTTCTT GAATTGCGGA ACACTGCATC TCTGACAAAC CGTCGTGACA TCTTCACCTT
TTTGTCTCGT CCAGTGACCC GGCTCCCTAG GATTATTCTT TTACTCGGTG AATTGCTGAA
AGTAACTCCT AAAGAACATG CAGACAAGGA AGATATACCG GTCCTAAAGG AAATGCTCGA
ACGGGTGGTT AAAGATACAG AACATGGTAT TGAGGCCGCC GCTGTTAAAA TAAAACTGTG
GAATATAGCA GAAAGATTGC TGTTCAAGAA GGGAGAAATC ACGGTGTGCC CGGTCCATTC
TTTTCACTCT GCGACAGAAC TAACAGTCTC GCGTAGGATT TAGATATCTC CAACCCCAAA
AGGACTTTTG TGCACTCAAG TTATCTGTTC CGACGAATCC GAAGCGAATC CAATTGGCAC
GGATGGTATA CTGCTCTCTT TGAATTGACT ATAGTTGCTT TGAGCTAATG TAAGCCCATC
TTCGCAGGCA GGATATATAT GCCATTCTTT TGGATAACTA TTTGCTTCTG ACAAGGGAGG
AAGAGGGTGG GAAGTATGTT GTGATATCGC GCGTGAGCCA ATTATATGAT GTCAACATGT
AGGCGACGGC ACTGATTTAT TACGATCTCC TCCAGCCTAT TCACCTGGAC TTTCTGAATA
TAATATCCAC CGACGGAGCA CCTGAGAAAC GCTATGATCA TAGCGCTCAT GGTAATCATA
AGAAAAACAA TACAGTGGCG TGAGTGAGGT AGAGGATCAC AGCGAAACTG AAGGAAATGC
TGATGCGGGT TGGTAGAATG GATACCATGC TGCCAGCTGA GGCATTGATG TATCCTTTCA
CCGTCTCTAT TGGGGGACCG GAAGGGAAAG CCTACACCTT ATGCACTACG TGAGTATATC
GACGCCCTAT GGACTCCTAA TCATAGCTAA CACATGCATT TTCTAGAGAT CAAGCTCACC
GGTGAGCATG TGTTACTTGA CATGGTTGTT CTTAATTAAT GGCAAACAGT TCAGAATGGA
TCGATAAAAT CCAGAATACC CAGATGTTGC GAAAATATGA CTTAGAAAGC AATCGGGTGT
GTCGCATGTA TGCCAAACCC AATACATAGC TAACGGTCGA CATTTAGATC TTCGTCACGC
ATACCATATC TATGCCTTCA AAAATGCGTA GCCCGGTGAT TTGTAGCGAA ACATTCATCG
TTCACGGCCG AGATACCGTG GCCTTCGCCA CAGAGACATC GGTATGGTTG GGGTGGTTGA
GAGATACGCA TTGTATGCAA TATGGCGATT CGCTAATTCA CTATGGCAAG TCGCTGATAC
ACTGATGAAT AGCATTCCGC GAGTTGGTGC AATTGCAAAA TGGGCAGATA TCCTCCATAG
CTCTGGTCCC AGAATTTTCG TGGCTGCTTG TTTTAAGTTC GGGTACCCTT CTAGCATTCA
ACCTCAAGAG GATGATGCCT ACCTCCGATC CTTCAACATG GATGAGCATG GGGAGAGCCC
AAGGGCAGTT GCTTAATCAA TCTGGGCATT CGGTTGCTTG GGTATATACG GGCAAAACTA
AGGGCCGGAC ACTGAGTGAG CTGTCCATCA CTTGTTAGCC TTGGGTAGGA CTGATTATTG
GGGAATGGAA AGTAACATAT GTCGTCTATG GTCGAAACAC GCATGGCTGC ACTCTCAATT
TTCTCGAACC ACTGTTCGAT AACAGCTATC CATCCGCTTC TTCTCTCCTT TCTGACCCTG
TTTTCCGCAG CTTCGCCTCG CTCCACCTTC CTGGACATGC CTCTTCAATC ACTTTCTTCC
GGCAGACTGT GGCGATTACC ACAGAAAAGA CGATCGTTAT AGCAGAACCT GGCAATCCGG
TGTACAATTG TGTACCCACT GCCGGTAGTA CTGCCTTTTT AGCTGAAGAC GCCGTGGTTG
CTAAACTTTT GAACGGTCAG GGAAGGACAA GGGCCGAAGG GAGGCCTTTG GGTATGTGGC
AAACAGGAGG CGACGAATTT ATTTTGGTAT ACGATTGGGG AGCATGCTTT GTGACCAAAT
GTGAGGGCTA ATGAAAAGTA TTCGTAAGTA GTGTGCTGAC TCGCAGACAA CTTAGTTGGA
GAAATATGCC GATCAGGAGC TTTTTTAATC TGGGATCTGT TCCCCGTCTA CGCGATCTTC
CGTTCTCCTC ATCTTCTACT GTTTGATGAT TCTAGTCGCG CAGAGGTCCG CAATGTGACC
TCGGGGAAGA TGTGTGAAGT TATCGAAGAG AAAGGCCTCC GTATGATGCC CCGTACCAGA
GAAGAGCAGG GGATGCTGGG TTGGAGTGAA AAAGGGTTGA TCCAGCTTGT AGAGGTAAGT
TTGGATGACC TCAAGAATAG ACGCCTTTAT TAA
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| Protein sequence | MPIMDYLTAN TASRTPTASS SSIDSLSGSS DTKAYKQSRS KSFGGVFKRH RLSWGGPSIE
KFRLGERDSS NEDCSGGIGG KPYNEQQPLD NLNGQSYVNH IRRSSDSSQL IRDLRKGNES
EDFKAIDTYR LPGIGFVGTN ASKDAIERPP WRSIRCEESS GSLLSPGWSP ALSDRLYEDL
APAPQNPSHR YLTPQDSYSL LLTYQSSAVT SHSSFDVSTS SRCPIDQKMS SSSADQELSP
EWHQIVDKSL CDSLDKMEQR RQGLWWEIIK GEREYVRDMG IMHHVFIQEL RDCRPPVIES
TKLEPFIAEV FSTAVILSHA HETILRNLME RQRIEWPLLT TATDIYLQIM LEIVDPYEAY
MKNYPFAEAR VRRESVKNQE FHKFLELRNT ASLTNRRDIF TFLSRPVTRL PRIILLLGEL
LKVTPKEHAD KEDIPVLKEM LERVVKDTEH GIEAAAVKIK LWNIAERLLF KKGEITISSI
ALVPEFSWLL VLSSGTLLAF NLKRMMPTSD PSTWMSMGRA QGQLLNQSGH SVAWVYTGKT
KGRTLITYVV YGRNTHGCTL NFLEPLFDNS YPSASSLLSD PVFRSFASLH LPGHASSITF
FRQTVAITTE KTIVIAEPGN PVYNCVPTAG STAFLAEDAV VAKLLNGQGR TRAEGRPLGM
WQTGGDEFIL VYDWGACFVT KFGEICRSGA FLIWDLFPVY AIFRSPHLLL FDDSSRAEVR
NVTSGKMCEV IEEKGLRMMP RTREEQGMLG WSEKGLIQLV EVSLDDLKNR RLY
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