| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01600 |
|---|
| Symbol | |
|---|
| ID | 3255694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | + |
|---|
| Start bp | 478547 |
|---|
| End bp | 480149 |
|---|
| Gene Length | 1603 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638254810 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569047 |
|---|
| Protein GI | 58263274 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0095] Lipoate-protein ligase A |
|---|
| TIGRFAM ID | [TIGR00545] lipoyltransferase and lipoate-protein ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATTGCAGTG CCAGAATGAT ATCTCTATCA GCCATCCTTC GTCCGTCTTT CTGCCTCCCG
CTCATCACTC GTCGAGCCCT CCACACCTCC ACCTACCATC TACAGAACAA GGCTGTTCAA
CCTCAAACAC CAGCCACTGG GAATGTAGAT CTTGGTGCAG TATGTATAGA TAATATTAAT
CCAAACATTT CAGCTTTCGT TAACTTGCCA TTCTAGCCCG TTACCTATAT ATCAAAAAGT
CATGATCCGT GGTTTAACCT GTCATACGAA GACTGGTACG CTGCAAGGAT TCTTCGGTCC
AAGTATACTT CAACTAATTT ACCCCAAAGG CTGCTTCGAA ACACACCGCA TGATCAGCCA
GTTTTATTCT TATATCGCAA CTTTCCATGT GTAGTTATAG GGCGCAATCA AGTACGTGTA
TATCCGCTTT TTCTAGGACT CGAAAAAGGT TGACTCGCCA TAGAATCCCT GGAAAGAGAC
GACTCCCAAG AAGCTGAGAG AAGAGTCAAT TCCACTTGTA CGGAGACGTT CGGGAGGCGG
CACAGTATAC CATGTTCGTT CTGTCCATGC CCGTCGGCCA ACTATTAATC ACACACCATG
AGTGTAGGAT ATGGGCAACA CGAACTTTTC CATCATCCTC CCTCGTCTTC TCTTCACAAG
GTCCCACGGG GCTCAACTGA TCTCACGAGC TATAAGAGAA ACACTCGGTA TTACCGGCTG
TGGGGTAAAC GATAGGAATG ATGTAGTAAT TAGAGATGGG GATAGGGAGT ATAAGATGAG
TAGTTCAGAG CTGCTGCTAG TACTAATACT CTGATGCTGA CTCTTCGTGC TTACGTCTCA
GGATCGGCAT ACAAGATCAT CCAACATAGG GCGTATCACC ATGGAACAAT GCTCATTTCC
TCTTCTCTGG CTGAGCTTGG CAAGTCATTA AGATCAAGTT CTGTGGGTCA CATGAAGTCT
TACTGAGCGT CCTTCTAACC GTAACCTCTG TAGCCAAAGA TGGAAACTAA GGGTATCGCC
TCATATCGCT CGCCGGTCAC GACCCTGAAC CATTATTTAC CCCCGTGGCA ATCCAAGCAC
TTGCATCATG ACGATTTTGT ACGTGCTGTC ACTGCTGAGT TTGCCAAAAC CTATGCCGGC
GAAGAGAAGC CCATGACAAC GTGCGAGGTC ACGGAGTCTA TAATCAAAGA TCAGAAAATT
TGGAACGGGT ATGAAGAGTT GAAATCTTGG GAGTGGCAAT ATGGGCAAAC ACCAGAGTTT
ACCAACGAGT TGGAAGGCAA CTTTTCTTTT GGTGATCTTG CAAGTCGTTT GTAATTCTTG
GTGGAATTTC AAGCGCTGAT AGTATTCTTT CCAGTCAATT CCTATCGCAG CTCGACATGC
CGTAATCACG TCGATGAGTA TTCACCTTAC TCCTCCTCTC CATTCCTCAA CGGAAGAAAC
ATCTATCAAG CAAGCATACC TGGATTCATT GGCCTTATCA TTGGTGGGTA GACGATATGA
AAGCCTGGAA GGGTTTGAAG GCGCCATGGG GGAAGAGTGG GATGATGAGC ATTGGAGGGA
TCTGGGCAAC GACATTGTTT CTTGGTTGCG GAAGCACATG TAA
|
|---|
| Protein sequence | MISLSAILRP SFCLPLITRR ALHTSTYHLQ NKAVQPQTPA TGNPVTYISK SHDPWFNLSY
EDWLLRNTPH DQPVLFLYRN FPCVVIGRNQ NPWKETTPKK LREESIPLVR RRSGGGTVYH
DMGNTNFSII LPRLLFTRSH GAQLISRAIR ETLGITGCGV NDRNDVVIRD GDREYKMSRS
AYKIIQHRAY HHGTMLISSS LAELGKSLRS SSPKMETKGI ASYRSPVTTL NHYLPPWQSK
HLHHDDFVRA VTAEFAKTYA GEEKPMTTCE VTESIIKDQK IWNGYEELKS WEWQYGQTPE
FTNELEGNFS FGDLSIPIAA RHAVITSMSI HLTPPLHSST EETSIKQAYL DSLALSLVGR
RYESLEGFEG AMGEEWDDEH WRDLGNDIVS WLRKHM
|
|---|
| |