| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01280 |
|---|
| Symbol | |
|---|
| ID | 3255947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | + |
|---|
| Start bp | 389215 |
|---|
| End bp | 393793 |
|---|
| Gene Length | 4579 bp |
|---|
| Protein Length | 1320 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638254778 |
|---|
| Product | actin cross-linking, putative |
|---|
| Protein accession | XP_568800 |
|---|
| Protein GI | 58262780 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4240] Predicted kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TATAACCACC ATACTTCCAC AGCACGATGG CCTTCTCTCG CTTCGGCGCA TCCAAGTACA
GGAACGCCGT ACCAAGCATA CCCCATCGCG AGGAGTGGTA CCGCTCCGCT CTTCCGCCGG
CTTCTGCAAC TTCCACCACC TCCAGTGCGG CCAGCACATT CTCTTCCGAG ATAAAGACAA
ATCGAGAATG GATAGTTACG GCCACGCAAG CTGGTGATCT GTCTTATAGG CCTTACCATG
GGGATTCCAC CTCCTTGAAA GTCGGAAGCG GAGGCGGTGT GGGTGACTGG GATCTAAGCA
GACTTGAAGA TGGATTGCTT GTGGTTGGTG GTTTAGATGG TGCAGTAAGT GGTCATGACA
GACAAGTGGA CTGCGTCGCC TAATTGATCA TTGCTCAGGT ATCCGCATAC CAGTTGCCAT
CAGCTTCAGC TACGAGAGAC TTGTCACATG TCTCTACTAT ACCTCAATCG TCTTCTCCTG
TCACTAACCT TATTCTTCAT CCCACAACGC CTAATATTCT TCTAGTCTCC ACTATAGCCG
CACCAGCATC TATCTATGAC CTCTCCACTA CCCAATCACC TTCTATCATC TTGGATGCAA
AGGAACCCAA GGGAATGTGG TCCATAGCGT GGAATAGCGA CGGTCGATTG GTCGCCGGTG
TAGGCAAGAG TGGTATGGCC TATATCTGGG ACCCTCGGTC TGGTAAAGAG CCCAAAGTCA
GCAAACTCTT ACCTATACAA CCCTTGAAGC CAGCTCGTAT AAGATGGATA GGAGAAGATA
TCTTTCTCAC TTCGTTCTCA AAAACTCGAA ATCGCCAGTA CTCTCTCTTA TCCGGGTCAT
CGCTGTCAAC TACTTTTACT CAGAGCTTGG ATACCAATCC TGGTGTCCTA TTACCACTGG
TGGATGAGGA AAGAAAGATT ATATATGTGG CTGGACGGGG TGACATGACG CTTCGACAGA
TTGAACTGTC TGGTCCGCAA GGATACCAAG AGACTCTTCA TCCTCTTCAA TTCCCCCTGG
CATCTGCCTC ACTGGCAGCT GTCCATCCTG CAAAGCTTGA TGTGATGAAA GCAGAGATTT
CAAGGATACT GGTTCCTATC ATTGACAAAG ATGGTGATTC GCTCCTACCT GTTAGCATCA
AGGTGCCTCG AAGGCAGCTG ATCGACTTCC ACGAGGATTT GTATCCTGAT CTCGCCGGGT
TTGGTAAGCT TTCATCATGT CCTAGTAGTT TTGATTTGCT AATAACCATA TCAAGTACCC
GAGCAAACGG CCTCAGATTG GCTCAAGGGA GAAGATAAAT CACCATTGCC CATCTCTCTT
GATCCATCCA GGCGAGGTGC TTGGGAGTCG CAAGTCGAAA ATTTATTAAA AGAAAAAACA
GCTGCCACCC CGTCCAAAAA GCCCACCGAC AAACCTGCAC AGGCAACAGT TTCTGAAGCT
CAATCATCAG AACCTGGAAG TGTACCTCTC ACTCTCAACG CTTCTGCCGT ACCATCTGGC
ACATCAACGC AAGAGTCCAA GCCAAAGCCC TCTACGACCG TGCCAACGCC GAGCCAGATG
TCTTCTCAAA AGGTCCCATC AGACTCTGAA CCAGCACCCA TTACCGAGCC CAAGCCCGAG
CCCACTGCCA GGCCCAACCT CCCTTCCCTT CTTGATGATG AAGACTATTC GTCTACGAGT
TACAAAGTTC GTATCATAGC TGATTACCTT GCGGATCAAG TAGCGAAACA TAAAAGAAAG
GGTAATAAGG GGCCTTTGAT GGTCGGACTG CAAGGCCCTC AGGGTTGTGG TGAGTAAAAC
CATCTTCCGG GGTGAAACTA TTGACGTAGA AGCAGGTAAA ACCACTCTGA CTACAGCTCT
GGTCTCTTAT TTGAAAGATG GGAAGCAGCT CAAGTCGGCA ATTCTCTCTA CTGATGGTAA
AATTATGAAT TATACCTTGT ATCAATCGCT TCTGACAACT CTATAGACTT GTACAAGACC
CACGACGCTC TAAAGTCTGT TGCTCAACAA CATCCCGATA ATGCTCTCCT TGCTGGCCGT
GGTCCCCCCG GCACACACGA CATAGCCTTG GCGGTCGAGA CGATCAAAAA GGTAAACAGT
ATCAATGATT CTGCTGGATC CACTGTGGAC CTTCCCGTCT TTGATAAGAG TCTATGCGGG
GGCGAAGGTG ATCGAAGTGT GGACAAAGTT GTGATCAGTG GTCCTCTGGA TGTATTTATC
CTGGAAGGAT GGTCCATGGG TTTCGCACCC CTGTCTGAAT CCGAACTCAA GCAGGTCTAT
GACCAGCCCA AACCTGCTTC ATCCTCAACA TCCAAAACGT ATTTCCCCGA CCACTCTCTG
TCTTCACTTC TTACCCTCAA CGGTTACCTC GCCGATTTCG CGTCGTCAAT CTACCCTTCA
TTCACATCTT TCATCCAAAT TGAACCCGAA TCATATGACT ATGTATTTAA CTGGCGGCTC
CAGCAAGAGC ATAATATGAA GGCCAAGAAC GGCGGCAAGG GAATGAATGA CGAACAGGTT
CAAAAGTTTG TGGAAAGGTA TATGCCTGGG TACGAACTCT GGAAAGATGG GATCTGGAGT
CGGGGAGCAC CTTGGATTGG GCAGGGTTTG AAACTCAAGT TTGGAGAAAA TAGGGAGCTG
CTTGAAATGG GTGTGCCGCC TTCTCAGGCG CCTGCTACAT CTACATCTAC CCAAGCCAAT
AATTCATCCA CCTCAAGTGC AGAAATGGCT CCGGAGAAGA TTGTGCAGGC TACTTCTGCA
AAGGTACCCA AGCCGGCTAC CACGGCAGCT CCTGTGGCAG CAGCCCAGGC ACAACCTCAG
GCATCCGCCA AACCCAATTA CACCGCTCCC CAAGCAGCAC CTCTTACCGA ACGATTCAAC
CCTCACTGGT CACGCAAATT CCTCGCGGCC AAATCACCAC TCATCCCTAC TTATGACTCC
CTCCCGTCCA TCTCTTCGTT ACATCAAGAC TCTCAAATTT TGAAAGTGAC ATCTCATCTG
GCATTCTTCC CTATTCAGGG GACCGGTGGC AGACTTTGTG TGCACCCTTT GAAGAAGAAG
GGGAGGGTGG CAGTAGGGGG AGAAGGATAC TTGACGAATG GCGTGGAGAT TGTGGATTTT
GATGCGGAAT TGGGTGATGG AAAACGGGTA GCAGTTGCGG GTGAAGACGG TGCCGTCAGA
GTGTGGAAGA TTGATGAGGA TGGTGTTCAG GGCGTTGGAC CTCAACCTGG ACAAGTGCTT
CACGGTAGGT TAATATGTTG GCTTGTTTCA AACCAATTTT TTTTTTTCAA TTTATTTTTT
GAGTCGCTGA TTGCTTGTAC AGGCAAAAAC ATCGACAAGT TTACACAAAT TCTTTTCCAT
CCCACAGCCA GAGATCTTCT TGTTGGAGTG ACCAACGATT ATGGACAAGC CCACATCCGA
TTTTGGGATC TCTCCAAGGG GGAAGAAGTC AAAGTCATCG ATTTGCCGGC TCCTTCAGTA
TGTATCTTTC TCGATACGTT GTTTCTGTAA CCTATCTGAC TACGAATTGC ATAGGTATAC
CGATTAGCCT TTAGCCCGGC AGGTGACAAG GTAGCCGTCG GCACAAAAGA TGGCCGTCTG
GTTGTGTTTA ATCCTCGAGA CCCAGAAACT GTATCGTCCG GTAAAGCCCA CGACAGTCCC
CGATCTTTCC AAATCAGCTG GATCGACGAC AACCACATTG TATCTGTCGG TTTCTCTCGA
GGCTCCCAAC GAAGAATTCT GCTTTACCGC CTCCCGACAT CTGTAGGCGG TGAAATTACC
ACTCTATCAT CAATCACAAT CGACGTCTCT CCTTCCGTGC TCTTCCCCGT CTATGATGCC
GATACTTCTA TCCTCTACGT CTGGGGTAAA GGAGAACGTG TCATTCAGGC ATACGAGGTC
CACCCCGAGG ACGATAGGGA GCCCATCGCG AAATTGCCTG GATTCACGGG TGATTCTCCC
CAGATTGCTA CAGTGTTTAT GCCGAAACGT ATGGTGGATA TGAAAAAGGT GGAAGTAGCA
AAGGCTTTAA GGCTGACTGC AAAGACACTT GAGGAGGTTA GCTTTACTAT TCCAAGGAAC
AAGGCAGGTT TATTTTTATT TTTTTGTGCT CAAACAAGTG CTTCCATATG CTTATTCGTG
AATGTGCGTA GCCCGATTTC TTCCAAGATG ACATTTACGT GCCCACCAAG AACGTTGAAA
TCACTTCTTT GACGGCTTCT GAATGGCTGG ATGGCAAGGA TGTTGCTCAA GAGATTATTG
ACTTGAAACC TGAAGGCATG ACACTTCGTA CGTTTTATCG TCTGCGTTGT CTGCTCAGTT
TACTTTACTG ATACATCCCA CGAAAAGTCT CGCTGGCGCC AAAGGCAGAT ACTACCGCTA
GAAAAAAATT TGTACCTGCA AAGAATATCA TGTCGGAGGA AGAAAAGAAG AAGAAAGAAA
TGGACGCTCT CTTCGCGAAA GCCAAGATGG ATGAGAGCAG TAGCGATGAA GAGGAGATAA
GGGCAGGACT GGATCCTCCT GACGATGACT GGTAGCGGGG GTTACTTGAA TAATGGAGGT
TTTATAACTG GAATGTGAT
|
|---|
| Protein sequence | MAFSRFGASK YRNAVPSIPH REEWYRSALP PASATSTTSS AASTFSSEIK TNREWIVTAT
QAGDLSYRPY HGDSTSLKVG SGGGVGDWDL SRLEDGLLVV GGLDGAVSAY QLPSASATRD
LSHVSTIPQS SSPVTNLILH PTTPNILLVS TIAAPASIYD LSTTQSPSII LDAKEPKGMW
SIAWNSDGRL VAGVGKSGMA YIWDPRSGKE PKVSKLLPIQ PLKPARIRWI GEDIFLTSFS
KTRNRQYSLL SGSSLSTTFT QSLDTNPGVL LPLVDEERKI IYVAGRGDMT LRQIELSGPQ
GYQETLHPLQ FPLASASLAA VHPAKLDVMK AEISRILVPI IDKDGDSLLP VSIKVPRRQL
IDFHEDLYPD LAGFVPEQTA SDWLKGEDKS PLPISLDPSR RGAWESQVEN LLKEKTAATP
SKKPTDKPAQ ATVSEAQSSE PGSVPLTLNA SAVPSGTSTQ ESKPKPSTTV PTPSQMSSQK
VPSDSEPAPI TEPKPEPTAR PNLPSLLDDE DYSSTSYKVR IIADYLADQV AKHKRKGNKG
PLMVGLQGPQ GCDLYKTHDA LKSVAQQHPD NALLAGRGPP GTHDIALAVE TIKKVNSIND
SAGSTVDLPV FDKSLCGGEG DRSVDKVVIS GPLDVFILEG WSMGFAPLSE SELKQVYDQP
KPASSSTSKT YFPDHSLSSL LTLNGYLADF ASSIYPSFTS FIQIEPESYD YVFNWRLQQE
HNMKAKNGGK GMNDEQVQKF VERYMPGYEL WKDGIWSRGA PWIGQGLKLK FGENRELLEM
GVPPSQAPAT STSTQANNSS TSSAEMAPEK IVQATSAKVP KPATTAAPVA AAQAQPQASA
KPNYTAPQAA PLTERFNPHW SRKFLAAKSP LIPTYDSLPS ISSLHQDSQI LKVTSHLAFF
PIQGTGGRLC VHPLKKKGRV AVGGEGYLTN GVEIVDFDAE LGDGKRVAVA GEDGAVRVWK
IDEDGVQGVG PQPGQVLHGK NIDKFTQILF HPTARDLLVG VTNDYGQAHI RFWDLSKGEE
VKVIDLPAPS VYRLAFSPAG DKVAVGTKDG RLVVFNPRDP ETVSSGKAHD SPRSFQISWI
DDNHIVSVGF SRGSQRRILL YRLPTSVGGE ITTLSSITID VSPSVLFPVY DADTSILYVW
GKGERVIQAY EVHPEDDREP IAKLPGFTGD SPQIATVFMP KRMVDMKKVE VAKALRLTAK
TLEEVSFTIP RNKPDFFQDD IYVPTKNVEI TSLTASEWLD GKDVAQEIID LKPEGMTLLS
LAPKADTTAR KKFVPAKNIM SEEEKKKKEM DALFAKAKMD ESSSDEEEIR AGLDPPDDDW
|
|---|
| |