| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01030 |
|---|
| Symbol | |
|---|
| ID | 3255839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | + |
|---|
| Start bp | 309304 |
|---|
| End bp | 314813 |
|---|
| Gene Length | 5510 bp |
|---|
| Protein Length | 1706 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638254754 |
|---|
| Product | multidrug resistance protein 1, putative |
|---|
| Protein accession | XP_569109 |
|---|
| Protein GI | 58263398 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.540229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTTA AATGTGGAGG AAAGAGCGAA TACCGAATGG GCGGCCTGGT ATGGGGACGT
GGGTTTGCCG AAAACACACG GTCGGGCCGC CTACGGCCCG GGAACTGGTC ACGTGGTCGG
TCCGGCTACC CGAGAAGTTG CGGAGATGGG GGGATGTCCG TGTGCCTGTC GCTGTGCCTT
TTTGGTGTGC CTGAATGCCG TCTTTTGTTC TTTCGGTGGA GGACAAAGAG GGACGAAAAA
CAAAAAGACA CGATGATCCA GCCGGGGGGG GGGGGGGGAG ATGGAGTGTC CATAATTGCA
CCCGCCTCTT CTGCACCTAT ACAAGCCCCC CAGCCGTTGG CCCATCTCTA CGCCGGAGCC
CCCATGTCCA CCAGCAGCCG CTTTGCGTCG CCGGACAGAG TCGAGCTCGT CGCGCTCACA
CCACGCCAGC TGCCGCCCAC GTCCGACGGC TCGCCTTTCC ACGACCGGCA TTCAGTGGCT
ACGCCTGTGG CCAGTATGGC GGAGGAAAGC GACGGGCTGT CGGGCTACGG CTATGGAAGG
AGCCGCCAAA AGACAGCGCC AGGCTACCAG TTCGCCAACC CTTCTCCCGC TGGCCTAGAC
GAAAAACGCG GCCAGCCAGT CTCTTTTGGC CCAATGCTGG ACGAAATCAC GCCTCCGTCA
CAATGGAGAA GGTCATTATA CCCAGCTGAT GCGCCGCCCA TCCCGGCTTC AACGTTTGAG
CGGCACCTCG GCCTCGTCCC TCTTCCAACA TCCCCGGCCA CGTCCCATCG CATCATGCCA
GTTTCTGAGC CTATTAAACC CAGGTTCCGT CGGCTCTTTG TCTTCACCAC CACCAGAGAC
TATATCTTGC TTCTCTGCCC AGCGGTTGTG CTTTCCATTC TCTCGGCACT CATCCAGCCC
TACATGTCCA TCGTGATCGG TAACGCCTTC GCCATCTTTG CAGCCTATCC CCTGAATACC
TCGCTCGCTA CCGATGCCGA CCGTGCTGCC CTCCGCAGTG GTGTCGCCAG CACGTCTATA
CAACTGACAG TCGCCGGCGT GCTTGCCTTG CTCTTCAACT ACTTGAAAGG GGTCATGTGG
ACGAGATACG GCGAGACAGT GGCAGATAGA TTAAGAGCCA AGGTCTATCA TGGTGTGCAG
GGTAAGCCTA TGGAGTGGTA TGATATGGGC ATGGGTATGA GAGAAGAAGA GCAAGGAGAG
GGAAAGGAGA ATGACACCGT AGGCGCTGGT GGCTTAATGT CAAAGTTCAA CAGGTATGTA
ATCACTGTGG TACTCATCTT GCATTCCTGA CCGTACCACC GCAGGGAGAC CGATGATGTT
AGGATGGCCA CTTCCCACGC CTTTGGATTA GTGGTTCAAA ACACATTCAC TTTCGTCCTG
TGCTTCATCC TTGCTATCAT TGAATCGCCA TCTTTGGCTT TCGTTACCCT CTCCACCATT
CCCCTTGTCG TCCTTACCCA AGTCGTTACC CAGATCCTTT GCGCGCCTCT GTTGGCTACC
GAACGACGCG TGCTTGCCGA GGCCTCCACC AACGTCGAGC GTGCCACCGC TGCAATTTCT
ACAGTCAAAG TACACAACGC TCAAGCAGCC GAAGAAAACA GGTTCATGCA CTCGGTGAGC
AAGAGCAAAG GTAATTTGAT CAAACAAGGA TTGGTGTGGG GCGTATCCGC AGGCTTGACA
GACTTTTTCT TGCTCGGAAC GTTTGTGCTC GGATTCTGGT ATGGCGCCAA AATCATTCGG
GAAGGCAAGG CCACATCAGG AGCCGTCATG ACATGCTTCT GGGCTTGTCT CTTTGCCGCC
ACGTACCTTC AGCAGGTTGT CCCCCAGCTC ACCATAATGA CCAAGGGCAA AAACTCGATC
GCTTCGCTAT TGACAGTCAT TCAAGCTAAC CCTTCCAGAC CCATATCTGG CAACCCATTC
TCCCCTACAA ACTCTCCAAT TGATAGTAGC TTCTCTCCTG CGGTTAATAC ATTGAACCCC
AAGCGTGTTT CCCGCCCTCT TGCTCTCCAA GGGGTTCGAC CTTCTCGATG CCATGGAGAG
TTCAATTTCA ACCACATCTC ATTTGCCTAT CCATCTCGCC CGGAAAATCC TGTACTTTGT
GATATCTCCC TTTTCATTCC GCCTGGGGAA ACAACCTTTA TCGTGGGCGG TTCAGGCTCT
GGCAAGTCCA CCATTGCTCA GCTACTCCTC CGACTATACG ACCCCACGTC AGGAGAGATT
ACTATGGATA ACCAATCTTT CCCCTTCTTG AACGGTCATT TCACAAGAGA AAATATCGCT
GCTGTACAGC AAGGCTGTAT TCTTTTCGAT ATGTCGGTGC ATGACAATGT CGCTATGGGG
CTTGCTGGCG CTGGTGCCGA TCCCAAGACA GGCGTGAAAA GGGCACCAGA GGACGTGACC
CGTGAACAAG TTGTAGAGGC TTGTAAAATG GCGATGATTC ATGATTTCGT GGTGAGCTTG
CCCGACGGTT ATGATACCAT CTTGGGAACC GGTGGGTCGA GTTTGAGTGG AGGACAGAGA
CAGCGATTGG CGATTGCGCG GGCGAGAATC AGAAACCCGA CCGTCCTCAT CCTTGGTAGG
TCGTTTGCCA CTGCCTTCTT GGCCGGGCGC TGATGGTTAA ACTATAGATG AAGCGACATC
GGCTTTGGAT GCCACTTCTA GGGTGCTTGT CTTCCAAAAT CTCAAGGCGT GGCGCAATAA
CCGGACCACC ATCGTCATCA CCCACGACCT TTCACAGATC GTTTCCGACG ACTTTGTCTA
CGTCATGAAA AACGGCGTCG TCGCCGAGCA AGGATTTCGT CTTGATCTCA TGAAGAAACC
AAACGGCACG TTTGCCCATA TGGCGGCGGA ACAAGCCGTC AATCCTTTGC CGGCCAAGGA
GGTCGCGTCT GACGCAGAGT GGCATGATGC GCTCAACACA CTCCTCGACA TGGAGGAAGA
TTATGAAGAG GTGCTCGACA GCAGGGTCAG ATCTCACACT CCTTCATTTC TTGGGATGCA
GAGAAATAGT GCAGTCTATC TCGATATCCT TGACGAGTAC TCCAGGAGTC AGCGCCTTTC
TCAAGTCGAC CGCCGACAGT CTCGTACTAG CTTGACACCC GCTCAGAAGC GTCTATCATG
GACTCCTGAG CAGCTGGGCA GTCGTGCCCC TAGCAGACAG AGTATAACCG CTCCGATCAG
TCGCCCTCCG TCTAGCCAGA TGAGTCGACC CGTGAGCAGG TTAAGCGTCG TCGTCGATTC
AAATTCGAGG CTAAGCTTGA GGACCATGAT GGCGGAGAGC CGAGGACAAG ATGGAAGAAT
GCTTCATCCG GGCTGGATGG AAAAAAATTC ATCCTCAAGG ATAAGCGCAA TTAGGCAAAG
GCAGCAAAGA ACACTCTCTG AGAATCTAGA AGACGACTTG AAAGGCCTGC CTTCCGATGT
CAACCTTTCC GACAGCGTTC TTGTTGAAGA GGTCTCCACA GGCTCAGCCA CTATGCCACC
GGTTCCAGGC TTATCTTCTC TCATCAAACT CTATTTCCCA ACACTTCCAG CTAAGCCACT
TCTCCTGCTT GGCTGTATAG GTTCTATCGG TCACGGAGCG ACAACTCCCA TCTGGTCATT
CTTCCTTTCC AAGCTGATGA CTATCGTTGG AGCAGGTGGT GCTGATACCA CCTCTCTCAC
CAAATACGGT CTCATAGTCC TCGGCTTGTG TGCCGCACAA GGGCTGTCGA ACTGTGTTCA
GGAATATGCC CTTGTTGGAC TCTCTGCTAG ATGGACCCAT ATGGTACGCG GGGTCGCCAT
GCATAAGCTC ATCACGCAAG ACAAGGCATT CTTTGATCTT TCATCCAACT CGCCCTCTCG
ACTGGTCCAG ATCCTCATCA AAGATGCCGA CGACGCGAGA ACCATTATGA GTCAAGTAAT
CGGTAGGGCG GTGACTGTGG TGACCATGAT CGGTTTGGGT TTGATTTGGG CAATGGCTGT
GGAATGGAGG TTGACTCTGA TAGGCTTGGC CTTGGGTCCA ATTTTCGGCG GATTCATGGC
GGTTAACTCA TGGTTCATTG GTAACGTCGA GCTGGCTTGC AAAGTTGCAA GAGAGGAGGT
GGGAAGAGTG TTCTATGAAG TAAGCAATAT ACTGCAATGG TTTCCACAAC GAAATTGACT
GATTTCCCCT TTTCAGAGTG TAGCCAACGT CAGGGGGATC CGAGCGATGG CGCTCGACAG
TGCTTTTGAA AAAAGGTTCG AGGAGGATGC TAGTAATGCT AGGAAGACCG GTACACGTTC
GGCATGGGCT ATGGCCATGG GTGGAGCGAT TGCAGGAGGA TTGCCTTTGT TTGCTCAAGG
TGAGTACGAT GCCCGATCTC GTTACAGATT TAGCAACTCG TTCTAAAACT AAATCTTCTT
ATGCCGTCTA GCTCTCATGA ACTTTGCCGG TTCAGCTTTT ATGCTCCAAG GGCGCATGAA
CTACGAGCAG ATGTTACAAG TATATAACCT TGTACTGTTC AGCCTAACTT TTGGCAGTGG
TATGCTTGAT TTTAGTAAGT AGATCTCGTG ATCGTCAAGA GTGTTTGTTT GCTGATCAGC
TTCCAGTCCC TACCATGGCC AAAGCTCGAG CAGCTGCTCG GGACTTTAAC CGCATATATC
AGCTATGCGA ATCCACCACC GAATCAATCG GTTCACTTCG CTTTCCCATC AATGGTCACG
TCGAGTTCTC TCATGTCAAT TTCTCATACC CCTCGAGGCC TGATGTTCCC ATTCTTAAAG
ACGTGTCATT TACGTTCAAA CCCGGAGAGT GCGTTGCAGT CGTCGGTCCT TCCGGCTCCG
GTAAATCGAC TATCGCAGCT CTTCTGCAAA GGCTATATGT GCCAGATGGT GGCGACATTC
GCTTGGGCGA TCGTAGCCTG AGGGAAGCGG ATGTTGTATG GCTACGGAAT CATGTTGCTG
TTGTATCGCA GTCGGCCAAT CTCTTTGATG CCACCATCGC CGAAAACATT GCCTATGGAT
CACCCAATTT GCCCCTTTCC GAGATCTACA GAGCTGCCGA AGCTGCCAAT ATCCACGACT
TCATTCAGAG TCTACCGCAG GGCTATGAAA CGAATCTCGG AGAAAACGCC AGTTTGATCT
CCGGCGGGCA AGCTCAAAGG CTGCAAATTG CGAGGGCGTT ATGTAGAACA AGCAGGGTCC
TCATCTTAGA CGAATGTACC AGCGCATTGG ATCCCGACAA CGCTAGGGCT GTATTGGACA
CGATTGTCAA GATCAAACAG GCAAGTACAT TCGTGTTACG TCGTAATCCT CCTCGATCAA
TCTGACCGCT GATATCTGGA TATAGGACCG TACAACAATC TTCATCACCC ATTCAGTCGA
GGCCATGAAA CGCTGCGATA GAATCATTTG CCTCGGAGAA GGTAGAGTAC AGGAGGAAGG
GTCATTTGAA GAACTCGTTA GGAAGGGAGG GGTATTTGCT CAGCTGATGA AGACGGGAGA
ATGGGAGTAA ATTATACAGG TTGCTCTTGC GTTAATGTTG TACAGCGATA
|
|---|
| Protein sequence | MVFKCGGKSE YRMGGLVWGR GFAENTRSGR LRPGNWSRGR SGYPRSCGDG GMSVCLSLCL
FGVPECRLLF FRWRTKRDEK QKDTMIQPGG GGGDGVSIIA PASSAPIQAP QPLAHLYAGA
PMSTSSRFAS PDRVELVALT PRQLPPTSDG SPFHDRHSVA TPVASMAEES DGLSGYGYGR
SRQKTAPGYQ FANPSPAGLD EKRGQPVSFG PMLDEITPPS QWRRSLYPAD APPIPASTFE
RHLGLVPLPT SPATSHRIMP VSEPIKPRFR RLFVFTTTRD YILLLCPAVV LSILSALIQP
YMSIVIGNAF AIFAAYPLNT SLATDADRAA LRSGVASTSI QLTVAGVLAL LFNYLKGVMW
TRYGETVADR LRAKVYHGVQ GKPMEWYDMG MGMREEEQGE GKENDTVGAG GLMSKFNRET
DDVRMATSHA FGLVVQNTFT FVLCFILAII ESPSLAFVTL STIPLVVLTQ VVTQILCAPL
LATERRVLAE ASTNVERATA AISTVKVHNA QAAEENRFMH SVSKSKGNLI KQGLVWGVSA
GLTDFFLLGT FVLGFWYGAK IIREGKATSG AVMTCFWACL FAATYLQQVV PQLTIMTKGK
NSIASLLTVI QANPSRPISG NPFSPTNSPI DSSFSPAVNT LNPKRVSRPL ALQGVRPSRC
HGEFNFNHIS FAYPSRPENP VLCDISLFIP PGETTFIVGG SGSGKSTIAQ LLLRLYDPTS
GEITMDNQSF PFLNGHFTRE NIAAVQQGCI LFDMSVHDNV AMGLAGAGAD PKTGVKRAPE
DVTREQVVEA CKMAMIHDFV VSLPDGYDTI LGTGGSSLSG GQRQRLAIAR ARIRNPTVLI
LDEATSALDA TSRVLVFQNL KAWRNNRTTI VITHDLSQIV SDDFVYVMKN GVVAEQGFRL
DLMKKPNGTF AHMAAEQAVN PLPAKEVASD AEWHDALNTL LDMEEDYEEV LDSRVRSHTP
SFLGMQRNSA VYLDILDEYS RSQRLSQVDR RQSRTSLTPA QKRLSWTPEQ LGSRAPSRQS
ITAPISRPPS SQMSRPVSRL SVVVDSNSRL SLRTMMAESR GQDGRMLHPG WMEKNSSSRI
SAIRQRQQRT LSENLEDDLK GLPSDVNLSD SVLVEEVSTG SATMPPVPGL SSLIKLYFPT
LPAKPLLLLG CIGSIGHGAT TPIWSFFLSK LMTIVGAGGA DTTSLTKYGL IVLGLCAAQG
LSNCVQEYAL VGLSARWTHM VRGVAMHKLI TQDKAFFDLS SNSPSRLVQI LIKDADDART
IMSQVIGRAV TVVTMIGLGL IWAMAVEWRL TLIGLALGPI FGGFMAVNSW FIGNVELACK
VAREEVGRVF YESVANVRGI RAMALDSAFE KRFEEDASNA RKTGTRSAWA MAMGGAIAGG
LPLFAQALMN FAGSAFMLQG RMNYEQMLQV YNLVLFSLTF GSGMLDFIPT MAKARAAARD
FNRIYQLCES TTESIGSLRF PINGHVEFSH VNFSYPSRPD VPILKDVSFT FKPGECVAVV
GPSGSGKSTI AALLQRLYVP DGGDIRLGDR SLREADVVWL RNHVAVVSQS ANLFDATIAE
NIAYGSPNLP LSEIYRAAEA ANIHDFIQSL PQGYETNLGE NASLISGGQA QRLQIARALC
RTSRVLILDE CTSALDPDNA RAVLDTIVKI KQDRTTIFIT HSVEAMKRCD RIICLGEGRV
QEEGSFEELV RKGGVFAQLM KTGEWE
|
|---|
| |