Gene CNB00870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00870 
Symbol 
ID3256046 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand+ 
Start bp250211 
End bp251312 
Gene Length1102 bp 
Protein Length282 aa 
Translation table 
GC content55% 
IMG OID638254738 
Producthypothetical protein 
Protein accessionXP_569094 
Protein GI58263368 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.709286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTGC ACCTCCTTGT TCAGATACCG ACACTCCACT CCACGCCCAC AGCCATGGCC 
ATCCTCTCCA CGCCGTCGCC GACGCTCTAC GTCTCGGGGC TCGAGACAAA GACAAAGAAG 
CCGGAGCTCA GGCAGCAGCT CTACGCGCTT TTCTCTCCAT ACGGCAGAGT GTCAGTTCTT 
CTCCTGCCTT TCAGCGTGCT TCTGCTGACA CTGTGCTGTT TGGCAGGATT GATGTGGTCG 
CGAAGAAGCA TGACGGGGGA AGAGGACAGG CGTTTGTCGT CTTCGAGGAG CAGGTCGCCG 
CCACGGCGGC ATTGAGAGGG TTGACAGGCG AAACATTCTA CAACAGGGAA CTGGCACGTC 
TCTTCATCTC TTTGCCAGCT ATCAGACTAA CCCCAAGCAG AGAATATCAT ACGCCAAAAA 
ACCGTCGTAC GCCACCACCG CCCGTCAAGA CCCTTCAGCC TCCCGGGAAG CAGCCGCTAT 
CCAGGCCGCC AAACTCACCG TTTCCAGAGC CCAAGACGAG TATGAGCAGC TTGAAAAGGA 
GAGACACGAT GAAGAGGCCG GTTTCTTGGG CGAGAAGAGA GGCTTGGAAG ACGAGGGGGA 
CGAAAGGGGA GCAAAGAGGG TTAAACAGGA GGACGATGAG GCGATGGAGA TTGAGATGGA 
TGAGGGTCAG TCGATACCCC ATTGTGTTGG CGTAACAGGT CATGTTGCTA ATAGTGACTG 
CTAGAAGAAG ATGAGGAGAA ACCGGTGCTC ATCTGCTCAA ATCTTCCCGC AGAGTGTAAT 
GCCGATATCA TGGGTGCTCT CTTCTCTCAG TACGTTCCAT TAATGCTCCA TACGAAATAC 
CACCTAACAC GATCCATCCA GATATCAAGG CTTCGTCTCC GCCACCCAAC TCCCGTCCTC 
CTTCACACCT CCTTCCTCCC ACCCCAAGCC CAATCCCGGC GCCGTCTCTT TCCACGCTAC 
ATTCCAGTCA AGGGATCAGG CCGCCAAGGC AAAGGACGAG GTTAATGGCT ATCTGATGCA 
GCCAGGATGG GCGATGACGG CGACTTTGGC TTAGAAACAT TAAAAGCGGG CCGGGGTTAG 
ATTGGTATGT ACAGATTTGC AT
 
Protein sequence
MHLHLLVQIP TLHSTPTAMA ILSTPSPTLY VSGLETKTKK PELRQQLYAL FSPYGRVIDV 
VAKKHDGGRG QAFVVFEEQV AATAALRGLT GETFYNRELA RLFISLPAIR LTPSREYHTP 
KNRRTPPPPV KTLQPPGKQP LSRPPNSPFP EPKTSMSSLK RRDTMKRPVS WARREAWKTR 
GTKGEQRGLN RRTMRRWRLR WMRKKMRRNR CSSAQIFPQS VMPISWVLSS LNIKASSPPP 
NSRPPSHLLP PTPSPIPAPS LSTLHSSQGI RPPRQRTRLM AI