| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00860 |
|---|
| Symbol | |
|---|
| ID | 3255885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 248619 |
|---|
| End bp | 249986 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 638254737 |
|---|
| Product | longevity-assurance protein, putative |
|---|
| Protein accession | XP_569093 |
|---|
| Protein GI | 58263366 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5058] Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.129119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAAAACCACC TCCTCCTCCG CAGCACACAG GTTTGCCAGA CACCCACGAG CTGGCTTCGT
GGACTGACTG CTCTTTCCCC ACGACACCGC ACTCCGCACC ACAGCGCCCC AGCATGGCGT
GCAACCTCAC CACCTCCGCC ATCCCGTCCC TCCTCCACTC CTATGTCCCA CAGTCCCTGC
GGCCCTTTGT GACCTTGTCG TATCCCATCA CAGACCCGCT CGCCCACCCG TCGGCGCAGA
CACTGTACGA CAAGGGCCCG CGAGATGCCT GCTTCGTGGT CTTCTGGGCG CTGGCATTCA
CTGTGCTCCG GGAGGCGGCC ATGAAGGGTG TCTTCTCTCC CTTTATGCGA ATATGTCTGC
CAAGCCCGCC GAGGGTCAAG GGACAGGAGA GAGAATATGC AAAGGCCAGG AAGAAGAGGG
AGCATACCGT CACGCGGTTT GCAGAGCAAG GTTGGAGCTG GCTGTATTGC TCTATATATT
GGACGTTTGG CGTCGTGAGT ACTGCTTTCC GTCGTCGCTC GCCTTGCCAG GGCCTGATTT
TTGTTCGTAG ATTGTCCTCC GTCAAAATGC CTCTCCAACA TCTCCCGAGC AGCTCTGGGG
CACATACCCG GTCATCCCTC TCCCAGCACT TACCAAGTTT TACTATCTCT CCCAGCTCGG
TTGGTGGTTC CACCAGCTGC TCGTGATCAA CTGCGAGAAG CGAAGAAAAG ACCACTGGCA
GATGTTTGGG CACCACATCT TGACCATTAC TTTGATTGTG GGGAGCTATG CCATGAACTT
TACCTCGGTC GGTGTCCTTA TCCACTGTCT TATGGACTTT TGCGACATTC TCTTACCAGT
AAGTCATTTC ATCATTTTTT TCTCCACCCC GTCCCATTGT AACATCCATT CTAGCTCGCC
AAAATGTTTC GCTATCTCTC CTTCACCACT CTCTGCGACT TCACATTCGT CGTCTTCCTC
ATCTCATGGT TCATCACTCG ACAAGTCGGT CTCTTCCTCG TCATCCGCAG CACCTATCTC
GACTTGCCCA AATTCATCCC CTTTGAATGG ACTCCCGAAC AAGGCCGATT CCTTACCTAC
TGGACACACA TTGGCTTTGT CTCCATGCTC TCCATCCTCT GGATCCTCGC GACCGCGTGG
TTTTACATGG CTTGCATTGT CGCTATCCGC GTGGTACGAG GTATGGGTGC TGAAGACTCG
AGAAGTGATG ATGAGTCCGA AGAGGACGCG TTGGAGCAAG TGCCAGAGAG TGTAGGTACT
TCAACTGCGA TCACATCTGA AGCAGAAGAG GATTTGCGAA AGCGAAAATG ATTCTTCAGC
GGGGGGGGGG GGTTATGATA GATTTTTTTT TACCTGAGGA AGGTTTTC
|
|---|
| Protein sequence | MACNLTTSAI PSLLHSYVPQ SLRPFVTLSY PITDPLAHPS AQTLYDKGPR DACFVVFWAL
AFTVLREAAM KGVFSPFMRI CLPSPPRVKG QEREYAKARK KREHTVTRFA EQGWSWLYCS
IYWTFGVIVL RQNASPTSPE QLWGTYPVIP LPALTKFYYL SQLGWWFHQL LVINCEKRRK
DHWQMFGHHI LTITLIVGSY AMNFTSVGVL IHCLMDFCDI LLPLAKMFRY LSFTTLCDFT
FVVFLISWFI TRQVGLFLVI RSTYLDLPKF IPFEWTPEQG RFLTYWTHIG FVSMLSILWI
LATAWFYMAC IVAIRVVRGM GAEDSRSDDE SEEDALEQVP ESVGTSTAIT SEAEEDLRKR
K
|
|---|
| |