| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00790 |
|---|
| Symbol | |
|---|
| ID | 3256026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | + |
|---|
| Start bp | 228360 |
|---|
| End bp | 230785 |
|---|
| Gene Length | 2426 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638254731 |
|---|
| Product | DNA strand annealing, putative |
|---|
| Protein accession | XP_569087 |
|---|
| Protein GI | 58263354 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5055] Recombination DNA repair protein (RAD52 pathway) |
|---|
| TIGRFAM ID | [TIGR00607] recombination protein rad52 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.182703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTGTCTTGT TCTCTTCCAA CCTAGCTAGG TGAAAGTTAG TCAAAAGGCT AGCGGGTAAT
ATCCAGCTAC TATCCGAAGA AAGCTATTAG AAACACCACA GAGCAGCATC CTCAAGCGAC
TCTCGATCGT CACCGGTCAC TGCACTTCGC CACTTTCGGC TCGTGCTATG AGCGTTTCGA
CAAAGCTCTT GGAAAACTAT CTCGAACATC AGCAGACAAA TCCAGGACTC GAAAGAAGCT
TCTCAGCACC TGCACTCTCC AATCGGCTCA CCCGTCCCAT CCAAAAACCC ACATTGCAAA
ACCGATCTCT CAAAATGGAT CCAAACGACT CAAGCTATAT GGGCCGCCAG AACTTTCCTG
TTTCTACACC GATACAAGGG TTTGCTAGTC AATGGTCTGA AGAAAGAGTT CATCAGATTC
AAGCTAGACT GGCAAGGAAG CTCGGTCCAG AGTATATCAC ACAAAGACCA GGTCCGGGTG
GAACTTCCAA GTTGTGGTGA GTTAGGTCTC TTCTAGTGTG TGAGCTAAAC TAAAGGTAAA
TTTTAATTAG CTACATTGAG GGCTGGAAAG GTGTGTCCAA CGAGCGTCTG ACTCTGTCGT
CTGACAATAA TCAGTGGTGG AGCTGGCAAA TGACGTCTTT GGTTTTAACG GATGGTCAAC
GACTGTCGTG TCTCTCACAA CCGACTTTGT AAGTCGTATC CGTATTAATC ACGGTCATGT
GCTGACTATC ACTGAAGCTT GACGTCAATA AGGACGGTAG GGTATCTGTT AATTGCACTG
CAATCATCAG AGTTACACTC TTAGACGGAA CTTTCCATGA AGATGTTGGG TGTGGACAGG
GAGATAATAT GAAAGGCAGA GGTGCCGCGT TGGACAAGGT ATGTTCAATT TGAGACTTTG
GAATGTCCAT TCACATCTTT GAAGGCACAA AAGGAAGCTA TCACGGATGG TACGAAACGA
GCATTGAGGT CGTTTGGTAA TATGCTGGGC AACTGTTTGT ACGACAAAGA TTACACGAAA
GAAGTGGTCA AGATGAGGGT CCCTCCAGTA AGATTGTTGG ACGGTTTCAA CATTCTAAGA
CTCACCATGG TTCTAGGTGC GATTTAACCG TGATGCCCTC GAGCGACGAC CAGAATTTTT
GCCTGCTGGT GTACCCGCTA TGCCACCTGC CGGCCCATCA CATGTATCGC CCATTCCTTC
TCACCTCAAT AATGCCCCTC GCCCTCAGGC ACCTGCTCCT GTCCAAAATA ACATGTTACC
TCCTCCAAAC ATCCCACCTC AACCTCCTGC TGCGCCAGCT ACTCCATTAA AATCTGTCAA
CGAAATGCAT GATGACGATG TTACCATTGC TTTGGACGAA AACTTTGACC CAGAATTTGC
CGACTTTTAT GGGAGCGATT CCATCTTTGC CGAGCTAGAT GATCAGTCGA TTCAAGCTGG
TCCCAACCTT AGTAATTCGT GCGTTTTGAA ATAATTTCTT TTTTAGGTAC ACTCTCAGCT
GACAATTTAC GATTAGTAAT AATACGGATC CAGAGACTCC CAAACCTGTG CCCGTGCCGG
AACAGCCAGC CTACCAGAAC CGTCAACGTC CCGATCTCAC GAAAGCCGCT TCCGATAACC
AGATTACTAC ACCCAAGCCG GCCAATCATC AATTCAATCC GGCTTTCAAA CCGACTATCA
ACCCTCAAGG CACCAATCAT CACACCGAGG CGAACAACGG CCTTCCCAAA CCTGGCCATT
CCAATACTCC GCCCGTCCTG GGCAACCAAA ACAACCAAAC TGGAGGACCC AGCTCAAGTG
CGGGGAGTAC TACTGGGTCA AAACCTGTGC TCCCCAAATC GAGACCATTA GGTGGTTTTG
CATTTCCCGG AAAGGTAAGT ATGCGAGTCG ATCATACTTT TTTTACCCAA GCTAAACCAT
GTTTGTATAG CAAACCCCGA AACAGTCTCG AGCTAACGCC ATAGCTTCCG CCTTTAAACA
AGCAGGCCGT ACTCCGCAAT CCCCACGGAT ACCCTCTGGC GGTGTTGACT TCGTTGCCAA
ACGAGCAACG ACCAAACTTA TGGTGGAAGG CGCAAGGTTG GGGTTGGAAG AGAATTGTGA
TATTGATCCT GTTGCCGATG GATTTCAGGG ATTTTCTAGT GCGAGAGGTC TGAAAAGATT
ATCGGAAGAA CAGCGGAGAA GGTAAGTATG ATGAAACTTA TTCATTTAAC GCCGGGAAAC
TGATGTTCGT TTCGTTACAG TATGTCGCCC ACTAAGGAAG CGTCAAATCC TGGGCTGGCG
TCGAGCGAAA CCAGGACGGC ATTAGGTGAA CTACCAGTGG AAGACGAAAG TAGTTGGTCG
TCCAAACGGC CGCGGACGAG TAAATGATCC TTTTTCCCGT CTTCCATGTT TCACTTGATA
GAGCCACCCG TCTCCCTGTA CCATCT
|
|---|
| Protein sequence | MSVSTKLLEN YLEHQQTNPG LERSFSAPAL SNRLTRPIQK PTLQNRSLKM DPNDSSYMGR
QNFPVSTPIQ GFASQWSEER VHQIQARLAR KLGPEYITQR PGPGGTSKLC YIEGWKVVEL
ANDVFGFNGW STTVVSLTTD FLDVNKDGRV SVNCTAIIRV TLLDGTFHED VGCGQGDNMK
GRGAALDKAQ KEAITDGTKR ALRSFGNMLG NCLYDKDYTK EVVKMRVPPV RFNRDALERR
PEFLPAGVPA MPPAGPSHVS PIPSHLNNAP RPQAPAPVQN NMLPPPNIPP QPPAAPATPL
KSVNEMHDDD VTIALDENFD PEFADFYGSD SIFAELDDQS IQAGPNLSNS NNTDPETPKP
VPVPEQPAYQ NRQRPDLTKA ASDNQITTPK PANHQFNPAF KPTINPQGTN HHTEANNGLP
KPGHSNTPPV LGNQNNQTGG PSSSAGSTTG SKPVLPKSRP LGGFAFPGKQ TPKQSRANAI
ASAFKQAGRT PQSPRIPSGG VDFVAKRATT KLMVEGARLG LEENCDIDPV ADGFQGFSSA
RGLKRLSEEQ RRSMSPTKEA SNPGLASSET RTALGELPVE DESSWSSKRP RTSK
|
|---|
| |