Gene CNB00780 details

Gene Information

• Locus tag: CNB00780
• ID: 3256021
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: -
• Start bp: 226149
• End bp: 228150
• Gene Length: 2002 bp
• Protein Length: 510 aa
• GC content: 47%
• IMG OID: 638254730
• Product: DNA polymerase Delta, small subunit, putative
• Protein accession: XP_569086
• Protein GI: 58263352
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.177257
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACGG TTCTCCCAGA ACCAGAGGGA ATCCCCTGTA TCCGCCCGGC TGCGTCCTAC 
GATCCCCTCA CAGAGCTCTC GAAACCATTC ACAATCGACC CGGCTTCTCG ATCATACAAG 
CACCAGTATG CCAACATCTA CTTTGTGAGG TTGGTCGAGC AGCGCCCTGC TGTTGAGAAG 
AAGGCTACGG AAAAGTGGAA GGATGTTAAG GGTTAGTGAC TGTCAATTTC TTTGCCTGCC 
CGTACTAACT TGGTAAAAGG CAATCCACCG CTTTTACCGC GTATCCTCAA CTTGACCCGG 
TCACAGCTTT GCTATATCGT CGGTACAGTT TATATGGAAA TGCCTCTGAA ACCCAATATT 
CTGGAAGATA TGGCTCGAGA CGTAGGCCGT TTAGCCATTT TGAGTACGTT TTAAGCTGAC 
TTGCAACAGC ACTGGCTCGC TGCACCTATT CCAAGAACGA AATTCTTTTC CGCTCAAGAT 
TCCATCCACC TTGAAGATGA GTCAGGCCGA GTGCGACTGA TAGGCGATGC CATCCAGAGG 
GAAAGAGATA GGGAAGGAGG TGGTCTTGTG ACGGGAGTGA TCATGGCCGC ATTGGGGATG 
GAAACTCCTT CCGGGGATTT CGAGGTGATC GACATATGCT TTGCAGGAAT GCCCGATAAG 
CTTGTTCTTA ACCCTGCGCC ATCCAGTGCC AAAAGAAAAG GAAAAGAAAA AGTTGAAAAT 
GACGAGGACA TTGATATGCA AGAAGGTATG GGCGTTGTCC GAGCTTCAGG CCGTTGCTGA 
CATGTCCAAA AAGATGCTAA AATTGAACTC CCAGAGAATG CAAAAACTTG GATAGCTATG 
GTGTCTGGTT TGTCGATCGG TACCCAAGAA GCGTCGACGG ATCTCAAGGC TGAAATGTTG 
GTCGAATGGT TGATGGGAGA GATTGGAGGA CATTCAGTTA GTAACACTGT TTGACGAACC 
AGATTGCCTT AACACCGGTA CAGGATCAGC TGGGTGGTGG ACGGATAGCG CGGTTAATCA 
TAGCGGGTAA CTCTTTAACA CTTCCTGTAA AAGGTGAAGA TGATAAAAAG ATTGTAAGGG 
TAGTCATTTT CCGGGTTACT GACGTATGCT GACTTGAAAC GTCAGAAACG CTTCAACTCC 
ACCTCCAAAC CCCTCTTCCC CAACCACCCG ACAAAAACCC TTGCAACGCT TTTCGCCGAC 
CTTCTTTCCT CATCTCTACC TATTCACCTT ATACCCGGAC CGTCCGACCC TGCGGGTGCC 
ACTCTTCCTC AACAACCTTT GCCGAAAATC TTATTTGGAG GTAAAGCGAA AACAGAAGGA 
CTGGAGTGTG AGACAAACCC TACATGGATG GAAGTTGGCG GAAGAAGGTA TGTCTCTTTT 
TCCTCATTGT CATCCAGCAG AAAAAGAAAG AAAAAACTGA ATCGATACAG CTTCCTTACT 
ACCGGTGGTC AGGCAATAGA TGACATTTTT AAATACGTGC CCGGCAACTC TAGACTAGGT 
ATGACACAAC GTACATTAGA ATGGCGGCAT ATGGCACCTA CAGCACCCGA CACCCTGTGG 
ATATACCCCT TCCCTGACAC TGACCCTTTT ATCATGAATT ATCGACCGGA CGTGTATATT 
GTTGGTAACC AACCAGAGTT TGAAACGACC ATTATTGGAG GTATGACCCT TTCGTATCCC 
CCCTTCCTTC AGCCGATTTG AAACTAACCT AACTCTGTTA TTCTGTAGAT GAGGACGCTC 
CCACACGTCT TGTACTCCTC CCATCATTTG CCAAGACGGG CGTAATTGCT TTTGTCTGTC 
TCGAAACGCT GGAATGCAGG ACGCTTGAAT TTGAGGCGCC CATGTGGGTT GGAGAAACCA 
TGGCTGGTGA AGCAGAGGGC GTTGATAATG AAGAAATGGA ATCATAGAAT CTTTAGCACG 
AGGCATTGTT TTGGGTCATA TCATTCATTT GTAACAGGTA ATATAGCTTC CTCAACTGAT 
GCCGAGTTGG TTAGAATTGA AG 

 

Protein sequence

MATVLPEPEG IPCIRPAASY DPLTELSKPF TIDPASRSYK HQYANIYFVR LVEQRPAVEK 
KATEKWKDVK GNPPLLPRIL NLTRSQLCYI VGTVYMEMPL KPNILEDMAR DHWLAAPIPR 
TKFFSAQDSI HLEDESGRVR LIGDAIQRER DREGGGLVTG VIMAALGMET PSGDFEVIDI 
CFAGMPDKLV LNPAPSSAKR KGKEKVENDE DIDMQEDAKI ELPENAKTWI AMVSGLSIGT 
QEASTDLKAE MLVEWLMGEI GGHSDQLGGG RIARLIIAGN SLTLPVKGED DKKIKRFNST 
SKPLFPNHPT KTLATLFADL LSSSLPIHLI PGPSDPAGAT LPQQPLPKIL FGGKAKTEGL 
ECETNPTWME VGGRSFLTTG GQAIDDIFKY VPGNSRLGMT QRTLEWRHMA PTAPDTLWIY 
PFPDTDPFIM NYRPDVYIVG NQPEFETTII GDEDAPTRLV LLPSFAKTGV IAFVCLETLE 
CRTLEFEAPM WVGETMAGEA EGVDNEEMES