| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00690 |
|---|
| Symbol | |
|---|
| ID | 3255934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 197017 |
|---|
| End bp | 198634 |
|---|
| Gene Length | 1618 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638254722 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569078 |
|---|
| Protein GI | 58263336 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.229021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTGTTCTGG TAGTCTTTAA GCTATACCAC GAATTGCAAT TCTATTGGTA GCAATGAGTG
GCTCAAAACA AGTGGAGAAT ATATCCTATG TGGACATCCA GGTGAGTCAT ACGTATTCGA
TCTATCGCAG CGATCTTCAG CTCATCGGTT TCTATCTGTT TGGCTCAAGC ATGATGCTAT
CGATGTCTTT GACGATGTCG AACAGGCGGT AATAATGAAG GAAGATATAT GGATATCGGG
CGTACGTGCT TTATTTAATC GGCTGTACGA TTCCTTACGC TAGGGTAGTA TCATCACGGC
GAAACCTCTG TCCATGGTAA AGCCATGGTG GAATTCGAAG ACGGAGGGTC CATAAACATT
ACTGCTCGAG ACGGAGTCAA GGTGGAAAGG GTAACAAAGG TTGGTCAGCA AATGTGAAAT
ATGTATTGGC GAGACATGAA TCTGGGCTGA TGGGATATTC GTGGATTTAA GACAGACTTT
GTGGTAGATA TCCCGGCATT AGGAATTTCC AAACGGCCTG TACATTTCCC AAAGCACGTT
CTACATCCTC CATACGAGAA AGCTTCAGAC GTCGATGTGA GTCCACATCG TTCTTCCTAT
CTAAAGTCTA CTGCTGACTC AGACAGCCTC CATTACAAAT CAATGCGCTC TCTGTGAACC
CCAAAACGCC ACACATCATC GTCGGAGGAC CGGATGGATA CTGTATGATC CTCCCAACGG
GTGTCATGGC CTCACCGAAG AAGGATGGTG TAAAGTTAAA GGGACATGTT GGAGACATAA
GAGCCGTCAG ATGGTTCCCC AGCGGTGAGG TCAGTATATT CTTTTCGTTA TCATCATAAT
TTGGCTAAGA GTAGGGCAAC AGGTGGTCCT CACAGCTTCC GCTGACCTCA CTATTCGTGT
CTTTGGCATG AACGGCGTCA ATCCTCGTAC ATTTAAAGGT CATTCTCGGG CAATAACATC
ACTGGCTATT TTGGGTGTTG GCAAGACTGT TCTTTCAGCG GCCAAGGACG GAACCATCCG
GCTCTGGGAT GTTGGCAGTG GACAACAAGT GAAGCAATGG ACAACTGGAG GTGAGAAGGG
AACGTTAGTA ATTGAAGATT TCATTTTGGT CGAAGAGTCA ACAGCCATAG AAGCGTTAGG
TCTCCAGGGC CAAGAAAGAG TCATGTTAGT CCAGGACCAG CTAGCTGTAT GGGTACAGCC
TTGGGATGGC GAGGGTTGGT TGGTGGAAAC GGATAAGCAG ATTGCGTCTC TGGCTTATGA
GAGAGAAACG GGGACTATCG CGATCGGATA CTCAAGCGGT GTCGTCGAGA TTAGAGATCT
TGCTTCTCTC ATCCCAGGAA CGACTGGCAA GCGGAAAAAG ATAAGAAGAA ACGAATCACC
AATTTACAGT CTCGCTTTCG GCCTTGATGT CGAAGATGGC AAAATAGATT TATATCTTGG
TACTGCCGCC GGTCTTCCTT GCCGTCTAGG AGTGAAGTGC GTGGCAGATG GGTACCAAGT
AGTGGTGAAG GACGAATTGG CCGGATGGGA TGCTGTTAGT ATTGAGTGTA TGGAGGCGGT
GAGGGATGGG ATGTGGTGCG GAGGAGGGGA GGGCGGATTG AGAAAGTACA CAGTTTAA
|
|---|
| Protein sequence | MSGSKQVENI SYVDIQHDAI DVFDDVEQAV IMKEDIWISG YHHGETSVHG KAMVEFEDGG
SINITARDGV KVERVTKTDF VVDIPALGIS KRPVHFPKHV LHPPYEKASD VDPPLQINAL
SVNPKTPHII VGGPDGYCMI LPTGVMASPK KDGVKLKGHV GDIRAVRWFP SGEVVLTASA
DLTIRVFGMN GVNPRTFKGH SRAITSLAIL GVGKTVLSAA KDGTIRLWDV GSGQQVKQWT
TGGEKGTLVI EDFILVEEST AIEALGLQGQ ERVMLVQDQL AVWVQPWDGE GWLVETDKQI
ASLAYERETG TIAIGYSSGV VEIRDLASLI PGTTGKRKKI RRNESPIYSL AFGLDVEDGK
IDLYLGTAAG LPCRLGVKCV ADGYQVVVKD ELAGWDAVSI ECMEAVRDGM WCGGGEGGLR
KYTV
|
|---|
| |