| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00620 |
|---|
| Symbol | |
|---|
| ID | 3255726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 174038 |
|---|
| End bp | 177831 |
|---|
| Gene Length | 3794 bp |
|---|
| Protein Length | 1059 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638254715 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569072 |
|---|
| Protein GI | 58263324 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.391313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCCACTCCA TCTTACATCT TGGCTGGTAT CTAAGCCGAG TAGAAGTTAT TCGCGACCAT
TTATAACGAT ATTTAACGGA CACCTTTTAG TTCAAGCCCG TTTCAAGACG TAGAATCCAT
TCGATACAGC CGAAATGGCA CAATCTATAG AGCCACTCCG CTCGCAGTCC TCGACATCAC
TGTACAAGCT ATACAATGGA CCAAACGGCG GTATCAACAG CAATCAAATT GCTGAAGAAG
AATTGCAAGA TCCGAGATTG AATTACTGCA ATGCTTTTTG GGGACCGGGG GATAGAGGGT
TCGATGTTAT CATGGCGAGA CTGAGAGGAG CAGGGCGGAC GGTTGAGGAA TTGAGAGCAT
TCTGGAAGGA ACGGTGAGTC AGGTCAATAT TTTTAATGCC AAAAGCTGAG ACTCTGGCCA
TAGCGCTGCT ATTGAGGACG AGTACGCGAA AAAGCTTAAC AAGCTGTCTC GTTTCTCCTT
GGGTAAAGAT GAAATTGGTG ATCTGGCAGA TTCTCTCCAA CATTTGCTCT CTGAAACAGC
TCAGCAAGCA TCCTACCATT CGTCATTGAG TAACGAAATA CGCCAAACTG TGGAAAATCC
CTCGGCAGAA CTGGGCATGC GGATGTCAAA CTTGAAGAAG GGTCTTCAGG CAGCGGTGGA
GAAAGCGCAT AAGAACAAGG GGTTGCAAGA AGGTCACGTA CAAAAGGTGA GTTAAACATA
TGCAGAGGTC ATACTCCATT AGGATTAATC GGTTTACAGG CCCGAGATCG ATACGAGCAA
GACTGTCTCA AGCTCAACTC TTACACCGCT CAATCTTCAC TCACTCAAGG CAAGGAATTG
GAGAAGTTGC ATACCAAATT GGACCGAGTA AGGCAGACGA TTGGATCGAA CGAAAACGAC
TTTAGGCAAT TTGTGAAGGT ATTGGAAGTA ACCCATCAGA AGTGGGAGCA AGAATGGAAG
AACTTCTGTG ACGTAAGTCG ATGCTTTGTG GTTGACGAAG AGGCTGATGG GAAGCTAGCA
TGTACAAGAC CTCGAAGAAG ACAGAATGGC GATCACAAAA GATCTTATGT GGGTCTATGC
CAATGCTGTG TCGCAAGTGT GCGTTGAAGA CGACAGTGTG AGTTTGATGT CGCTATTGCG
GATTTCGCTT ATGGCGATTT AGTCATGTGA GCGGATTAGA GAGAAGCTTG AGCAGTTTGA
GCCAATCAAC GACATCGTTA ACTTTGCCAA GGGATGGGGT ACTGGTGATA TGATTCCTGG
TATGTTTCCT CTATGTCCCC GGAAAAGGTG TCTGATACTG TCTTAGATCC CCCTCGTTTC
ATCAACTATT CTGCCGGGGA ATCTTATCCT ACCCAAGCCA CATTTCATGT CGCACAATTT
ATGCGAATTT CGGCCAAGCC TCCTATGCCA ATCGCCTCTC GCGAATCGAC TAGGGAAATA
CAGCGAGAGC AGACTCCTGA ACCGGAGCTG GAGCCGCAAC CAACAACTGA GCCGCAGCCT
GAGATTGCAA AGGAGCGAGA GCAGCCATCA GCCAAGTCGG GTGTCAATGG TATCTCTGAT
GGTTTGATTA GAACTACGCT GAAAGACGGA CCAGTCTCCG CTCCAACTGC GCTTGAACCA
GAAGCCCCCA AAGTTCCATT CGGTGGAGTT GCCCTTCCCG GAATGTCAGC CACCTCCCCT
GCTTCTCAAG GCGACTCTTC AAAGTATAAC CCTACGCCTC CACCTCCTGT TCCGGCTATC
TTGACTATGC CCGAGCCGCG TGTCCCCTCA CGTCAAGGAC CTCCTTCACC TAGGAAGAAT
ATCAATGACG AAGAAGACCC TATGGCAAAG GCATTGGCCG ATCTGCGTCG GGACCCTCCA
CCTCCTGGAA GCGTCAGGCG TAATGCATCT CACAGGCGAG CAGAGAGTGC GGTATCTGCT
GCTGGGTCTG TGAGAAGCAG CATGTATGGC CATGGAATCA AGTCTCCAGT TTCTCCTGCC
CCTAACCGCA TGTCGTTCCA GCAGAATGCT CCCGCCCAAT CACGATCTCC ACCTATCGAT
TCGACCCTCT CTCCTCCCCC TGGAGGCCAT ACGGCCGCCG CTCTCGCCAA GTCCATGGAC
GAATTCCGAC AACAATCATC CCGCGGACCT GAAAGCAAGC GCCAAAGCGT CAATTACTCC
AACTTCGCAG ATGATGTTGT CGGCTCTCAC CCTACCTCTC GACCTACTAC GCCTTCCTTC
CATCCCGCCT CCCCTCGGGC ACCTTCACCC GCGATGATGC AAGCTCCCAA ACAGCCGGCG
ACCCATATTG CAGATGAGGT CCTTTCGCAG TACCATCAAG CCTTCCCTGG TGAACGTGAG
ACGAGATCAA GGTCTCGTGC TGGCTCCATC ATGTCCAATG TTTCTAGAAA CTCATATATT
GAGCAGCAAC AGCATCAACA AGCTCCCCCG TCACCTGGTG TTCAGCCTAG ACGAGGGTTC
GTTGGCATAG GAGCTGGCAA TGCCGCACGG AGCCCGAGCC CGCAACCTCC TGTCTTCCAT
TCACCGGATC CTAGCCCTGT CATAACTTCT GGTACATTGG GGCCTCAAAA TTTGGGTATC
TCTTTGGATG CCAAGGGTGG CGTGGCGCAG GACACTATGG CGGAGCAGTA TAGGAGGCAA
TATCAGCAGC AACAGGCTCA AGCCCAAGCT CAGCAACCGG CTGCTCAGCC GACCCAAGTA
ACTGCTCCCC AGATGGGCAG CTATCCTGGA CAACGAACTT CACAGTATGG TGTCTCTGCG
TCCGGCTCTT CCCCTACTCC TGCTGCTGCG CCCGCAGGCT ACGGACCAGC TTACGGACAG
CCTTCAGCAA CTAATTCTTC TGTTATGGGT CCGCCGGCCA TCTCAGGCAA TAGACCAGTG
TCGGGCTACG GACAGCAGCA ACAACCTCCT TCTCAGCAGG CTTATGCCTC TCAAGCGCAA
TCTCAGGCTC CACAGGCTTT TAACCAAACT GCCCAGCCTG CATACAATCA GTACTCCTCT
ACCACTCAGC ACCAACCTTC GCCATACCTT CAACAGCAGA ACCAGGCGCC TCAACCTAAC
TATTCTCAGC GCCCTCCTTC TGTATACGGA CAAAGTAATG CCTATGGTGG ACGCGGCCCA
TCTCCTCAAC CTCAGCCACC CGCTATGCAA CCATCTCAGC AATCATATCA GTCTGGTCAA
CCATATGGTC GTTCACTGAG CCCATCCCCT GCGATGGGGC AAGGATATGG GTACCAAGCT
AGCCCACAAC AGCCGCAAGG ATACGTACAA CAACACCAAC AGCAGAGAAC GCCTAGTCCG
CAGCCGAACC AGCCCCCGCC TAATATGGTC CCTACAGGAC AATGGTCGAC TACCGGACTC
CCTGTCATGT TCTGTGAGTG CTTATTCTGA TCTGATCATG AGTTGCACTG ATGAGCGATA
CAGATGTCAA GGCGCTTTAT GACTACAGTG CTCAAACTGC TGCCGAGTTT GATTTCCAGG
CAGGTGATAT CATTGCCGTC ACTAGCACCC CAGAGGACGG ATGGTGGTCT GGAGAGTTGC
TGGATGAAGC TAGAAGGACG CCTGGAAGGA CCGATTTCCC CAGTAATTTG TGAGTTGTCG
GATCGTTTAT AAAGGCCAGT TTACTAATGA TTATGTAGCG TGACGTTGTT CTAAGCAATG
ATCTAATGTT AATTTCTTGA TGAAATGATG ATTGCATATA TAGCCAGACC TGTTTACGGA
GTGTGGCTGT TTAACGTCGT TTTGCGACCG TGGTTATAGT ACGATAGGAG ACATTACGAG
TCCTGTATTC CTGA
|
|---|
| Protein sequence | MAQSIEPLRS QSSTSLYKLY NGPNGGINSN QIAEEELQDP RLNYCNAFWG PGDRGFDVIM
ARLRGAGRTV EELRAFWKER AAIEDEYAKK LNKLSRFSLG KDEIGDLADS LQHLLSETAQ
QASYHSSLSN EIRQTVENPS AELGMRMSNL KKGLQAAVEK AHKNKGLQEG HVQKARDRYE
QDCLKLNSYT AQSSLTQGKE LEKLHTKLDR VRQTIGSNEN DFRQFVKVLE VTHQKWEQEW
KNFCDHVQDL EEDRMAITKD LMWVYANAVS QVCVEDDSSC ERIREKLEQF EPINDIVNFA
KGWGTGDMIP DPPRFINYSA GESYPTQATF HVAQFMRISA KPPMPIASRE STREIQREQT
PEPELEPQPT TEPQPEIAKE REQPSAKSGV NGISDGLIRT TLKDGPVSAP TALEPEAPKV
PFGGVALPGM SATSPASQGD SSKYNPTPPP PVPAILTMPE PRVPSRQGPP SPRKNINDEE
DPMAKALADL RRDPPPPGSV RRNASHRRAE SAVSAAGSVR SSMYGHGIKS PVSPAPNRMS
FQQNAPAQSR SPPIDSTLSP PPGGHTAAAL AKSMDEFRQQ SSRGPESKRQ SVNYSNFADD
VVGSHPTSRP TTPSFHPASP RAPSPAMMQA PKQPATHIAD EVLSQYHQAF PGERETRSRS
RAGSIMSNVS RNSYIEQQQH QQAPPSPGVQ PRRGFVGIGA GNAARSPSPQ PPVFHSPDPS
PVITSGTLGP QNLGISLDAK GGVAQDTMAE QYRRQYQQQQ AQAQAQQPAA QPTQVTAPQM
GSYPGQRTSQ YGVSASGSSP TPAAAPAGYG PAYGQPSATN SSVMGPPAIS GNRPVSGYGQ
QQQPPSQQAY ASQAQSQAPQ AFNQTAQPAY NQYSSTTQHQ PSPYLQQQNQ APQPNYSQRP
PSVYGQSNAY GGRGPSPQPQ PPAMQPSQQS YQSGQPYGRS LSPSPAMGQG YGYQASPQQP
QGYVQQHQQQ RTPSPQPNQP PPNMVPTGQW STTGLPVMFY VKALYDYSAQ TAAEFDFQAG
DIIAVTSTPE DGWWSGELLD EARRTPGRTD FPSNFVTLF
|
|---|
| |