Gene CNB00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00580 
Symbol 
ID3255628 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp166202 
End bp168525 
Gene Length2324 bp 
Protein Length732 aa 
Translation table 
GC content53% 
IMG OID638254711 
Productconserved hypothetical protein 
Protein accessionXP_569068 
Protein GI58263316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.328391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCACC ACCCCGCGGT AGCAGCACAG CCGGGCCGCA CTATTGCCCC TATCCCGCAC 
CACCGCCCAC AGCAACCCCG GATCACTCCT TACACACCAA ACGTACGCGA CCTCAACCCA
GGACCTAAGA ACAGACTCAT CCTCGCCCTC CGCTCCAACA TCCCCTTTGA AGTCGACTGG
GCGCTACCGC AGCTTGTTGT CGCAAGTTTC GACCAGTCGG ACGGGTTCAA GCTCGAGGCA
TGGCCAGACA GCATTTGCGC GTTGAAGGAA TGGCCGGCCA AGTGGCTTGA AGGACTAGAA
AGGGAAGCTG CAGTGTTTGA GATGAAAGCT GGGCGATTGG ATTTTGAGGG GGACGAGAAT
GATGAAGAGG GGAGGATGGC AAAGCGCAGA AAAAGGGATC TGGCGCTGGG GGCGGTGGTA
GAGTGGGAGA ACGATCTCAA GGTGGAACAA CGGGCGACCA ACTCTTTGCT CGTCCTCAGA
AACGCATCCT TCAACGCACC CAACGCAAAG ATCCTCTCAA GCTCAAGCTT CCTCGCTTTT
CTAGCCGATT TCTTCTCTTT GCCTCTACCG TTTCTCCAGC ATCTTTGCCT GAGAACCCCA
GAGCCTATAC ATCATATCCT CATCATTGTC CAGTCCATCT TCCCCCATTT GCGCGTGGAC
ATGCCAGGTA TCGACCGCAT CAAGCACATC TTTGGCGTCG TCTTCCCTCA GCTTTTTGTT
GATACCCGCG ATATCGCAAT GATGAACAAC CTTATCCCTC TCATGATGAT GGGCCAGACA
ATCCCCAATA ACCACCCTCC TCCGCCTGAA CTCATCCCTC ATCTTCTCCA GCTTCTCGTT
CTCCGTCCAG CAGGCCCACT TCTCGATTTG ACTCTTGACA TCCTCATCTC CCTCTCCACA
AATCCCATCC ACTCCCGTGC CATACTTTCT CATACTTCTT TCCCGCATCA TCTCAAATCC
ATCACAGCCT TACTCGAACA TCAAGCTCGT CCGGTGGTGA ATGCCCTTGA CCCACCGCCT
TCTACGAGAG GGAAAATGGT GCGTAACCCA GCGGGACCGA GTTGCAGAGC AGAGGAACTT
AATCAAAGGC GGACGAAGGA ACGAGAGGCC GCATTGGGAC ATATGGATCC CATGGCTGGA
GGTAGACCGG TGTACAATGA GGTAGGGGAT AAGCCACCGA CATTTAGTCC GGCGACGAAG
AAGAGGCTTT TCAGGATGAA AGAACCCGAA AGGTCTATCG AGTGGTGAGT CATAAATCAT
TAACCACTAC TTGAAGATGT ACAACAAGTT GACTTTGGTA TGTAGGATGC ACCAGGCATT
CGTCTACTCA TCGACAGCCC AAGTCCTTCA AGTGACATTC TGGCACGCCT ACCGAGATTT
CTTCACCAAC CCAGCTTGCG TAGAACCAAT GTTGAGTGCA TCTGATGTGA TCAAGAATGT
CACTGCAGCT TTCCCTGGAG CGAGCGCAAA AGTTTGGACC GATGCGAGTG GTGCGCAAAA
GTTTGTGATT GCTGGTGTCG GGTTCAGGAA GCGATCAGGT ACGTGCAGTC AAACTTTTTG
GATTTATAGT CGAATCGCTA ATGAGAACCA ATAAAAACAC AGATGACGAT GAAAGGTTTA
CATGTTACTG GCATGCATGC ACCCAACGGT ACTCAGCTAC CAACCCCGTC CAACTGCTCG
AACACATTAG CAACTACCAT CTCCAAACCT TTTCTGCACC CCAATGCCAA TGGGGCTCAT
GCGATCACAA CCTCTGCACG TACTCTCATC TCCTCACCCA TATCCCCCTC GGCCAGCCTC
CATCCTCCAT CTCCGTCCCT GACGCCATCT CTTGCCATAT CGCAGACCAT AGTAGCTCCG
TCTTGCAGCG CAAGATCACC AATCGTACCG TCCCTCCTTT ATCCAGCGTT CGTCTAGCCG
TTCAGGGGGC ATTTACCCCT GTCGACGCTC GTCGACAACC TACTGGCGCC GCCCTTCTCG
CGGCGTTACT TATCCGTAAC CTCGCCCGTA CCCTCCGTGC CGAGATCTCG CTCGCCGTGC
CCGAATTGTC TCATGCTCAA ACGCAAGAAA CGGCAGATGA AGCTCAAGCG AGAAAAAAAC
ACCTTCTCGA AGAGAGGTAT GGATTGCCAA TCCCGGATTC GGTGTTGAAA GAAGAAGAAG
AGGAGCAGGC GAATGTGCAG CAAGGCCAAG ATTTAGATAT GAGTGAGGAA GAGAGGGAGA
GGGCGAAAAA GGCGTTTGAG AATGTGGAGG AGAGGATTAT GAAGGTCATG TTGGAGAATG
TTAGTGGGAT AACGCAGTAT CTTGGTGATG CGCTTGGGCT GTAG
 
Protein sequence
MQHHPAVAAQ PGRTIAPIPH HRPQQPRITP YTPNVRDLNP GPKNRLILAL RSNIPFEVDW 
ALPQLVVASF DQSDGFKLEA WPDSICALKE WPAKWLEGLE REAAVFEMKA GRLDFEGDEN
DEEGRMAKRR KRDLALGAVV EWENDLKVEQ RATNSLLVLR NASFNAPNAK ILSSSSFLAF
LADFFSLPLP FLQHLCLRTP EPIHHILIIV QSIFPHLRVD MPGIDRIKHI FGVVFPQLFV
DTRDIAMMNN LIPLMMMGQT IPNNHPPPPE LIPHLLQLLV LRPAGPLLDL TLDILISLST
NPIHSRAILS HTSFPHHLKS ITALLEHQAR PVVNALDPPP STRGKMVRNP AGPSCRAEEL
NQRRTKEREA ALGHMDPMAG GRPVYNEVGD KPPTFSPATK KRLFRMKEPE RSIEWMHQAF
VYSSTAQVLQ VTFWHAYRDF FTNPACVEPM LSASDVIKNV TAAFPGASAK VWTDASGAQK
FVIAGVGFRK RSDDDERFTC YWHACTQRYS ATNPVQLLEH ISNYHLQTFS APQCQWGSCD
HNLCTYSHLL THIPLGQPPS SISVPDAISC HIADHSSSVL QRKITNRTVP PLSSVRLAVQ
GAFTPVDARR QPTGAALLAA LLIRNLARTL RAEISLAVPE LSHAQTQETA DEAQARKKHL
LEERYGLPIP DSVLKEEEEE QANVQQGQDL DMSEEERERA KKAFENVEER IMKVMLENVS
GITQYLGDAL GL