Gene CNB00540 details

Gene Information

• Locus tag: CNB00540
• ID: 3255636
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 158586
• End bp: 160690
• Gene Length: 2105 bp
• Protein Length: 624 aa
• GC content: 50%
• IMG OID: 638254707
• Product: conserved hypothetical protein
• Protein accession: XP_569064
• Protein GI: 58263308
• COG category: [R] General function prediction only
• COG ID: [COG2319] FOG: WD40 repeat

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCATACATC CACAAACAAT CCCCATTTTC CCAACATGGA CGCCCTCTTA GCAGCTGCTG 
GTCCTCTTCC CCAGAAGAAG GGGAGACCAG GCAAGGTCCA TCAGCGTACT CCTCATCCGA 
CCTCCCACAA GACTGTCGCT CGTGGAGATG GCAAGGACAA TATTGATTCC TCGACGCAAT 
CCATCTTGAG CAGCACACGG TTACCACACT CTTTCCACCG CTCCAACCTC GCTACAGGAT 
CGTCTTCAGC ACCTATCCGA CCTGATGGAA CTCTCGGAAG AATAGGGGAC AAGAAATTGC 
GGGCGAAAAT CGCCTCGCAA GATGTGGGCA ACAAGCGGGC CAAAGTTGAG AGGGATGACG 
TGAACGAGTG GATAAACAAG GCTATCGGAG GTGAGAGAGG TGGGATTGAG GTGGATGAAG 
ATCTAGGGGA GAAGACTTGG AGAGTCAAAC AGGAGGAAAT TGTGAAAGAA GTGGCAATGA 
ACGTCAGGGG GAAAAAGTTT GATTTGAAAA TGGAGGACAT GGGAAGCTAC AAAGTGGATT 
ACACTCGGAA CGGCAGACAC CTTGCTATCG CTTCATCTCG CGGTCATGTT GCTACTTTCG 
ACTGGCAAGC CGGTAAACTC CATTCCGAAA TTCACCTGAA GGAGACTGTT CGGGACATCA 
AGTTTCTCCA TTCTGAGGCG TACTATGCTG TGGCTCAGAA GAAATATGTC TTTATCTACG 
ACCAAAATGG CGTGGAATTA CAGTAAAGCT TGGAATCTTT GAGACAGGAA AGGTTAAGAA 
CTGATGGTCA TTGTAGTAAA CTGAAACAAC ATATCGACCC TACGCATATG GAATTTTTGC 
CTTTCCACTA CCTCTTGTCT ACTGTCGTGC GTATCTCGTC TCAAGTTTTT CTTGAGTCAA 
GCTGACATTT ATATCAGGGT AACGCCGGTT ATCTCAAATA TCACGACACC TCCACCGGTG 
TCATGTTAAC TCAAATCCCC ACCCGTCTTG GTTCTCCTCA TAGCATGACC CAAAACCCTC 
ATTCTGCTAT CATCCACCTC GGTCACGCCA ACGGTACCAT GACGTTATGG TCTCCCAACA 
TGACTACTCC TCATGTCAAA CTTTTGGCTC ATCGCGGACC TGTCAACGGT GTTGCTGTTG 
ATCCAAGTGA GCACAGTGCT GGGAGGTACG TTGCGACGAG CGGGATGGAC GGTACTGTCA 
AGCTTTGGGA TGGGCGTATG TGGGGTAAGG AAGTGCGAGA ATGGAAAACG AGGAACCAAA 
TCACATCGCT TGCCTTTTCC GGCATGGGTA TGCTCAGTGT TGGTGGAAAG AGCGGTGTGA 
CAGTTTACCA GGACCTTTAC AAAAACACTC ATCGCCCGCC ATCTCCCTAC CTCACCCTTC 
CTCTTCCTAG CTTGACAGCT TCTGCCACCC GTTTCTGCCC CTTTGACGAT CTCCTCTGTG 
TCGGGCATGA AAGAGGAATA TCATCCCTCA TAGTACCTGG TTCCGGTGAA CCCAACTTTG 
ACAGTGCAGA AGCCGACTTG TTCGAGACTC GTACAAGAAG GAGGGAACGA GAAGTCCGTG 
GTGTCCTCGA AAAGGTCCGA CCGGAGCTTA TCACAATGGA TGCCAACTTT TTGGGCAAGA 
TTAGTGAAGG ACGGGGTGGG GAGACTCATG AGGAGAGGGA GGGAAGGAGC TTTAGGCAGT 
TGGGAAGGTT GGAAAGATTG CGCCTTACCG GTAAGGCGGA TGAGCCCGAG CAAGAGGGTG 
TTGACGATGA GGACGCTGGG CTGGAAGATG GTGAGGCTGA CCCTAACGGC GGAGAGAGGT 
CAATAAGAGA AAAGAAGGAA AGGAGGAAGA TGAAGGGCAA GGGCGGTAGT ACCAAGAGGT 
ACTTGAGGAA GAAGGCGAAG AAAAACATTG TAGACAACTC CTTGGTAAGT CTCCCCAAGT 
TTTTGGTGCG ATCATAAACC CCACAACTGA CGATCTGTGG ATAGTTGCAA ATGAAGGCCA 
AGGTGGCAGC GCAACGAGCA TCAGAGGAGA AGAAGAGAAA GGTGGAAAGG GGCGAGATCG 
TCCAGGAGAC TGGGGCGTTG GCGAGATTCG CTTAGATATA GGGTTTTACT GCTCAATGAG 
GGGCT 

 

Protein sequence

MDALLAAAGP LPQKKGRPGK VHQRTPHPTS HKTVARGDGK DNIDSSTQSI LSSTRLPHSF 
HRSNLATGSS SAPIRPDGTL GRIGDKKLRA KIASQDVGNK RAKVERDDVN EWINKAIGGE 
RGGIEVDEDL GEKTWRVKQE EIVKEVAMNV RGKKFDLKME DMGSYKVDYT RNGRHLAIAS 
SRGHVATFDW QAGKLHSEIH LKETVRDIKF LHSEAYYAVA QKKYVFIYDQ NGVELHKLKQ 
HIDPTHMEFL PFHYLLSTVG NAGYLKYHDT STGVMLTQIP TRLGSPHSMT QNPHSAIIHL 
GHANGTMTLW SPNMTTPHVK LLAHRGPVNG VAVDPSEHSA GRYVATSGMD GTVKLWDGRM 
WGKEVREWKT RNQITSLAFS GMGMLSVGGK SGVTVYQDLY KNTHRPPSPY LTLPLPSLTA 
SATRFCPFDD LLCVGHERGI SSLIVPGSGE PNFDSAEADL FETRTRRRER EVRGVLEKVR 
PELITMDANF LGKISEGRGG ETHEEREGRS FRQLGRLERL RLTGKADEPE QEGVDDEDAG 
LEDGEADPNG GERSIREKKE RRKMKGKGGS TKRYLRKKAK KNIVDNSLLQ MKAKVAAQRA 
SEEKKRKVER GEIVQETGAL ARFA