| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00490 |
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| Symbol | |
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| ID | 3255621 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | + |
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| Start bp | 139386 |
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| End bp | 143399 |
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| Gene Length | 4014 bp |
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| Protein Length | 1186 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638254701 |
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| Product | Pol II transcription elongation factor, putative |
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| Protein accession | XP_569058 |
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| Protein GI | 58263296 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.84309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTACTTCG ATTTAGCCAT TATAGCTCCT CATCTGCCAT AACTCTTTTT CACCCTATAC
GCCGGGAATA TGTCCAATCC GGCAAGAGTT ATCCTGCTCG TTGGTAAAGG GTATGTCAAC
CAGCTACAGA TCTAGCTAAC CCATTGCAGC GGTGTGCAAA CGGATGTCGA TCTCGACTCT
CTCGCGCAAG ATGAAGTGGC CGATATCATC CCAGTCATGC TTGCTGACTA TGAGTCAGAA
TGCCGAGATT GGACATTGAT TGCGAGCGAG CATTGGAGAG AAGGGCGCTG GAACAGGGTT
ATGGATCTGC TGGAAAGAGC CGTTTCATGT AAGTCAAAGG AGACTTTTCC TCATAGCAAT
ATACTGAACA AGGTACAGTC TTCAATGGAG AACGGGGAAG GCGAAGGGAT TCTGCTTCTC
TCATCAACAT TCACTCAATG CTCGCTCACC TTCACCTCCA TCTTGCCCGT AGTGCGCCAA
AGGTCATCCT TCAAAACGCA AGTTAGTAAC GTCTTACCTC CTCTTCCCGA GCTTCATTAA
TGGAGAATGT AGAATATGAC AAATTGGATC CCTCAATAAG AACAAAAGAT TACCACCATC
GTGAAGCTGC TGCTAGCCTG AATGCCGCTA CTGAAGCTTT GAGAGCCTCT GGAGGTAGTC
AAGAAGATGA ACCTGTCAGC TTGACTATGG GGAAAGGTAT GTACCCATTA TCTCTCTCAG
TGATCATAAT TATAACAGCG GCCTAGTCAT CCATTACCTT GCAACTGGGC AACCAGGGCT
TGCACACCCA CTTGTCGAAA GACTTCTTCA GCGTCAACCC AACAACCTCA TGGCCCTCAC
CGCTCAAGCC CGTCTTCAAT TTGCCCGACG ATCACATCTT CAAGCACTCC AGACATACCA
AAAACTCCTT ACTCTCGCTC CCGAAATGTC TCCTGATCCC AGAATCGGTC TCGGCTTGTG
TTTCTGGCAA CTTGGGGATC GCGCCAAGGC AAGGACGGCG TGGGAACGTG CTCTCGAGCG
TGAGCCTGGA TCTTGGGTGT GTTTGTTGCT CCTCGGTTTG GCGTCTCTCA ACGATGCTCG
CCAACCTTCT ATCCCTCGCA CGGAACGACT CAAACTTGAA ACTGAAGGTG TAGGCTTTGT
CCAGAAAGCA TTCAAACTCA ATAACAAGTC GTCTGCATCT GCACTTGCGC TCGCGAGTGT
ATCTGGTCAG GGTGGACAAA GCCAGCTTCC TCTTGCGAGC AAGCTTGCCG AACGTGCGGT
CCAGTATGCG GATAATAAGC GTCATGCTGT TCTTGCCAAT TCTGAGAGAG GGAGATTAGG
TTTCATGGCT GGAGATCTCG CCGATGCTGG AACATATATT GCCGCCGTGA AGAAGGAAGA
CCCCAACGCT GTCAACATTA TTGCCGAGTT GACACTTGGC CAGATGGCTA TCAAAAGTGG
CAATTTGCGA GAAGCTCTTA ATTACATTGA GCAAACAGCC AAGAGGTTGA ACGGCCAAGG
TCCCCTTGAG TATACCGTGC TGCATGCTTG TCTGCTTGCT TATCCTCACC CGGGTATGTC
ACACGATGAA GTCGTCCGCA ATAGGACTCT AGCCCGAAAC ATGTTAACCG AGGTACACAA
CTTGGTGGCC TCTGCCGAGA CGGAAGCAGA CTGGGCAAAG TTGAGAGGTG TCGGTTCCGA
TGCCGATGTT TTTGTGGATC TCGCAAAGTT GTGGCAGGGA GAGAATGTGG AAAAGGCTAT
CGGAGCCTAC CAAACTGCAT TGTCCATTAT CACCGACAAC GATCTCGATT CTGCTCAGGA
GCCCGGTCTT GATCCTCCCA GTTTCACTGC ACTCCGATTA TCCGATAATC TAGGCGCACT
TTACCACCTT GAAGGCAACG TCGAAACTGC TGAGAGGATG TATCAAGAAG CTCTACAGAA
AATTGCCACT CAAGAAGGCA AGGAAGCAGA GACCCTCAAG ACTGTGTTGG CGTACAACCT
CGGTAGGGCG TACGAGGAAG GAGGCGACCA CGCTAAAGCT GCTCAATGGT ACCGTGACGT
GTTACGTCAA CATCCCGAAC ACGTCGAGTC CAAGGTGCGC TTAGCCCTTA TCGCCACTTC
TGCCGGTCGA CACTTTGACG CTCACACTCT ACTAAAAGAG TGCCTCCAAT CTGACGAGAA
CAATCTCATC CTCCGTTCAG TCTACACCAA CTTCCTCATT ACTATTGGTT CTTACCGAGA
AGCTTTTGCG TTCACTACAC AAACCCTTAA GGTCGATAAG TCCGATGCAT GGACGTTTTG
TGCGCTCGGC TGGCTGCATT TCACCCTTGG TCGAGAAGCC AAAAGCCCAC AGGAGCTCGC
GGAGCGTCCA AAGCAGTATC TCCGTTCTGC CGAAGCTTAT GAGCGAGCAC TCATCATCGA
TCCCAAATGT GCCATGGCCG CGCAAGGTTT GGCTATCGCG TTGGTAGAGG ATAGTCTTGC
GTTACGGGGT ACGAACTATG GTGCGGAGGA GGGTAAAGTT CGAGCGAGAT TGGCGGGTCA
GACGTTGGGT ATCTTTGGAA GGATCAAGGA TTCCTTGGCG GAAGGTGCGG TTAACGTTAA
CCTTGGTCAT TGTTATTTTA TACGAGGTGA AGAAGAAAAA GCTATTGAAT CGGTAAGTTT
CTGCTTGATC ATGGTCGGCG AGAGTACAGG TGCTAATTCA AGGAATAGTA TATGACCGCT
TCCAACGCCT TTGATGAGAA AGATGTCAAT GTTTTGTTAT ATCTCGCTAG GGCTTGGTAC
GCGCTTGCCA ACCGAGAAAG TAATTTCTCA GCTATGAACA AGGCTTTGGA CTACTGTCAA
AAGGTGAGTA ATAAGGTTTC TTCTCAGTAG TGTGAACCAA CTGATCCCGC TTTCAGGCCA
TGCATATCCA CCCCGCCGAT CGCGCCATTC TTTACAACAT TGCCATGATC CAGCAAAAAG
CCGCTGAAAT GCTCTTCTCC CTCGATTGTT CCAAGCGTAC CCTCGAGGAA CTTACCATCG
CCCTCAAACA AGCTCAGCAA GCCGTGGACA CTTTCCGCTC CCTTGCGGAC GACAGGTCCG
GGTCTTTACC ATACGACGCC GAGCTCGCAG ACCAGCGAGC GAGATATGGT GAAGGTCTGC
TTAGAAGGGC GGCGGGTGAA ATGACTAAGC AGGAGGCTTA CCAAGGCGAG GCACTTGCAC
GTGTGGAAGA GGCGAGAAGG TTACGTGCCG AGGAGCAAGC GAGGATCCAG GCGGCGGAGG
AGGCTCGTCA AGCCGAATTA AGAATCAAAG CCGAGGAAAT TGCTGAGCAA CGACGTAAAG
CCCGAGAAGA AGCGCAGGCG TGGCAGGAAG AGTTGGCAGC CAGGCAGGCA GAGGAGGAAG
CCAGGCGAGC GGCTATCGTG GAGAAAAGGA AAAGGAGGAA GGAAGGTATT GCCGATAGTG
GTGAGGATGG TGAAGGCGAA GGTCGAAAGA GGGAGAAGAA ACCGAGGAAG AAGAAGACAA
AGGAAGGGAA GAAGGGTAGG AAGGTAAGGA GCAAGAGTGA AGTTGGCACG ACCGATGAAG
AAGAGGAAGC GAGAGAGACG GGCGACGATG AGGATGAGGA GACTAGTCGG GCAAGGAAGG
CCAAGTCTAC ACTGGCTATG CTCAAGGCAA AGAGAAAGGC CAGGAGGGCG GACCCTGATG
ATGATGAGGA AGAGGATGAA GATGAAGTTA ACCAAGGACA AGCAAAGAGG GGAAAACAAT
TGTGAGTCTA AACATTGATA GATGCCGTCG AGAATGGGCT AACGCAGTAT GATAGTAAAT
CCAAAGCATA CATCTCTGAC TCTGACGACG AGAATGACGA AGCACCCGTT TCAGCCTCGA
GGCCGGGAAG TGAGGAACCT CTTCATCAAA AGGATGATGA GAGAGAACAG TCAGAAGCCC
ACACTCCTGC AAAGAGCCAA AATGATGAGG ACTCTGGGAT GGATGTGGAT CAGAATGGGA
ATGATGAGGA TGAGGACGAA TAGTTTTTTT GGAAACAATT CACTATGCAC CAGA
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| Protein sequence | MSNPARVILL VGKGGVQTDV DLDSLAQDEV ADIIPVMLAD YESECRDWTL IASEHWREGR
WNRVMDLLER AVSFFNGERG RRRDSASLIN IHSMLAHLHL HLARSAPKVI LQNAKYDKLD
PSIRTKDYHH REAAASLNAA TEALRASGGS QEDEPVSLTM GKVIHYLATG QPGLAHPLVE
RLLQRQPNNL MALTAQARLQ FARRSHLQAL QTYQKLLTLA PEMSPDPRIG LGLCFWQLGD
RAKARTAWER ALEREPGSWV CLLLLGLASL NDARQPSIPR TERLKLETEG VGFVQKAFKL
NNKSSASALA LASVSGQGGQ SQLPLASKLA ERAVQYADNK RHAVLANSER GRLGFMAGDL
ADAGTYIAAV KKEDPNAVNI IAELTLGQMA IKSGNLREAL NYIEQTAKRL NGQGPLEYTV
LHACLLAYPH PGMSHDEVVR NRTLARNMLT EVHNLVASAE TEADWAKLRG VGSDADVFVD
LAKLWQGENV EKAIGAYQTA LSIITDNDLD SAQEPGLDPP SFTALRLSDN LGALYHLEGN
VETAERMYQE ALQKIATQEG KEAETLKTVL AYNLGRAYEE GGDHAKAAQW YRDVLRQHPE
HVESKVRLAL IATSAGRHFD AHTLLKECLQ SDENNLILRS VYTNFLITIG SYREAFAFTT
QTLKVDKSDA WTFCALGWLH FTLGREAKSP QELAERPKQY LRSAEAYERA LIIDPKCAMA
AQGLAIALVE DSLALRGTNY GAEEGKVRAR LAGQTLGIFG RIKDSLAEGA VNVNLGHCYF
IRGEEEKAIE SYMTASNAFD EKDVNVLLYL ARAWYALANR ESNFSAMNKA LDYCQKAMHI
HPADRAILYN IAMIQQKAAE MLFSLDCSKR TLEELTIALK QAQQAVDTFR SLADDRSGSL
PYDAELADQR ARYGEGLLRR AAGEMTKQEA YQGEALARVE EARRLRAEEQ ARIQAAEEAR
QAELRIKAEE IAEQRRKARE EAQAWQEELA ARQAEEEARR AAIVEKRKRR KEGIADSGED
GEGEGRKREK KPRKKKTKEG KKGRKVRSKS EVGTTDEEEE ARETGDDEDE ETSRARKAKS
TLAMLKAKRK ARRADPDDDE EEDEDEVNQG QAKRGKQFKS KAYISDSDDE NDEAPVSASR
PGSEEPLHQK DDEREQSEAH TPAKSQNDED SGMDVDQNGN DEDEDE
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