Gene CNB00480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00480 
Symbol 
ID3255597 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp136391 
End bp139187 
Gene Length2797 bp 
Protein Length772 aa 
Translation table 
GC content50% 
IMG OID638254700 
Productthreonine-tRNA ligase, putative 
Protein accessionXP_569057 
Protein GI58263294 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.3781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGCA GGCTCATACC GCACGCAGCC CGCTTTTCAC ATAGAACGCC CACTAGATAC 
ACATACCCCC TCCTCCAAGC AGCACGTACT ATGTCCGCGG AAGCTCACCC CGTCTCTTCC
ACTTCAAAAC CCGCTCCCCC AGCCGAGGGT GTTAACCCCA TCACCCCTGC TGCTCATGAA
GGCAAGAAGA AGGAGAAGAA GGAAAAGAAG GACAAGAAGG GCGGTGGCGT TTCCGGTCCT
TTAGAACTCA GTCCTCCACC CGAGTTTTTC GCTGAGCGAC TCAAGATCTA TGACGAGTGG
AAGGCAAAGT ACGACAAATT CGTTGCTGGT AAGTGTCCCG ATCTATGTCT ATACCTCTCA
GTCGTGTGCA AAATGTATTG CCGAGTCCGG GGCTATCTTG TACAAGTTTG CCACCCACGG
GCTGCAGCTC CAAGCCCAAG TGATCATTCG CAGAGCTGGA TTTGATGGAC TTCATAATGT
TCTTTTAGAA ACAGTAAACG AACTGACATT GCGTAGAACA ACCTCGTGAA CCCATCACCA
TCACCTTCCC CGACGGCAAG ACGGTACAGG CCACCTCGTG GGAGACCACC CCTCTTCAGC
TTGCCAAAGA CATATCACCT TCTCTCGCTG ACCGAGTGAT CATCGCCAAG GTCAACAACC
AGCAATTATG GGACTTGACC CGTCCTCTTG AAGCTTCTTG CTCTCTTGCT TTACTCGATT
TTGACTCTCC CGACAACAAC TACGAAGCCA GACAAGTCTT CTGGCATTCT TCTGCCCATG
TTCTCGGTGA AGCTTGTGAG AGACGATATG AAGGTTGCTG TCTCGGCTAC GGCCCTCCCC
TTGAGGAAGG TGGTTTCTTC TACGACATGA GTCTCGCCAA TGGCCGCACG ATCTCCCAAG
ATGACTACAA GCCTATTGAA GACGTCTGCA AGGCTGCTGT CAAGGAGAAG CAACCCTTTG
AGAGACTCGA GTTGCCCAAG GAAGTCTTGC TCGAGATGTT CAAATACAAC AAGTATAAGC
AACACTATAT CCAGGACAAG GTCCCTGATG GAACCTCTTC TACTGTCTAC CGATGTGGTC
CCTTGATTGA CTTGTGTCTT GGTCCCCACG TTCCTCACAC CGGCCGTATC AAGTCCTTGG
CTGTTACCAA GGTGAGAGTG GCGAGCCGGA TATCGGGCGT CTGCTGATGA TATCATACTA
GAACTCTTCT TCTTATTTCC TTGGTGACGC CAAGAACGAC ACTTTCCAGC GAGTGTACGG
CATGTCTTTC CCCGACAACG CCCAAATGAA GGAGTACAAG AAGTACCTCG AGGAAGCCGC
CAAGCGAGAC CACCGAAAGA TCGGCAAGGA CCAGGAGTTG TTTATCTTTA ACGACCTTTC
TCCCGGAAGT GCCTTCTTCT TGCCTATGGG TATGAGGATC TACAACACCT TGATGTCATT
TATCAAGGAC GAATATTTCA AGCGTGGTTT CTCCGAGGTC GGATCTCCCA ACATCTTCAA
CGCCAACCTC TGGAAGACTT CTGGTCATTG GCAAAACTAT GCCGAAGACA TGTTCCAACT
TAAGGCTGAC GAAGAGCAGC TCGCTCTCAA GCCTATGAAC TGCCCCGGTC ATTGTTTGAT
CTTTGATGCG AGGGAGAGGA GTTACAAGGA ATTACCTTTG AGGTTTGCCG AGTTTGGTGT
GTTGCATCGA AATGAGGCTA GCGGTGCTCT TTCAGGTTTG ACCCGTGTCA GGCGATTCGT
CCAGGATGAC GGCAAGTCTT ACAAGGTCCC ATTGTTTGAT GCATCGTGCG CTGACCTTCT
CAATCCCTAG CCCACATCTT CTGTACCCCC GACCAAGTCG AAGCCGAGCT TTACTCTGCC
TTTGAGTTCC TCGACGCCGT GTACAAGCCT TTCGGTTTCA CCTACAAAGT CGGTCTCTCT
ACGCGTAATC CCAAGAAATG GATGGGCGAC CTTGAACTGT GGAACAAGGC TGAAGGCACC
CTCCGAGAGG TTCTCGAGCA AAAAGTCCCT GGTAACTGGC ACGTCAATGA GGAGGATGCC
GCGTTCTACG GTCCCAAGTT GGACTTCCAA TTGACGGATG CCTTGAAGAG GAGCTGGCAA
TGTGGTACCA TCCAGGTGTG TCCGATCTCT CCCATTACAT CAAGCATCAC CATAATATTG
TACTCATACC CATACTTAAT GTAGCTCGAC TTTAACCTCC CCGAGCGATT TAACCTCAAG
TACCACTCTC CCGAACAAAA TCCCGACGGC ACCCAATTCG CTCGACCAGT CATGATCCAT
CGTGCCATTC TCGGTTCCCT CGAGCGATTC ATCGCCATTA TCACTGAATC TACCGGTGGC
AAGTGGCCTC TCTGGCTTTC CCCCCGACAG GTCGTCGTCA TCCCCGTCGC CAAGCCCTTC
ACCGAGTATG CCCAAAAAGT GGCCAAAACT TTCCAGGAAG CTGGTTTGTA TGCCGAGGTG
GACTTGACGG ATAACACTTT GAATAAGAAG ATTAGAAATG CCCAGACTGC TCAGTGGAAC
TTTATCATGG GTAAGTCTCT TCTTTCTCAT TTCTGTACTT CTTTTTTTAG TAAAATGCTA
ATCAAACTAT GCAGTTGTGG GGCAGGATGA ACTCGACGCC CAAGCTGTCA ACATCCGTAA
CCGTGACGAT GAAGTACAAG GTCGAGAGGA GACTGTCGCG CTTAGCCGTG CTGTTGAGCA
GATTGTCAAG TTGAAAGAAA GCAAGGCCGC TGTCAGCAAG TTTGAGTAAA AGTAGTCTAG
ATAGTTTCGT TTTCTACAGC GAGATCAGTT CTTATCC
 
Protein sequence
MLRRLIPHAA RFSHRTPTRY TYPLLQAART MSAEAHPVSS TSKPAPPAEG VNPITPAAHE 
GKKKEKKEKK DKKGGGVSGP LELSPPPEFF AERLKIYDEW KAKYDKFVAE QPREPITITF
PDGKTVQATS WETTPLQLAK DISPSLADRV IIAKVNNQQL WDLTRPLEAS CSLALLDFDS
PDNNYEARQV FWHSSAHVLG EACERRYEGC CLGYGPPLEE GGFFYDMSLA NGRTISQDDY
KPIEDVCKAA VKEKQPFERL ELPKEVLLEM FKYNKYKQHY IQDKVPDGTS STVYRCGPLI
DLCLGPHVPH TGRIKSLAVT KNSSSYFLGD AKNDTFQRVY GMSFPDNAQM KEYKKYLEEA
AKRDHRKIGK DQELFIFNDL SPGSAFFLPM GMRIYNTLMS FIKDEYFKRG FSEVGSPNIF
NANLWKTSGH WQNYAEDMFQ LKADEEQLAL KPMNCPGHCL IFDARERSYK ELPLRFAEFG
VLHRNEASGA LSGLTRVRRF VQDDAHIFCT PDQVEAELYS AFEFLDAVYK PFGFTYKVGL
STRNPKKWMG DLELWNKAEG TLREVLEQKV PGNWHVNEED AAFYGPKLDF QLTDALKRSW
QCGTIQLDFN LPERFNLKYH SPEQNPDGTQ FARPVMIHRA ILGSLERFIA IITESTGGKW
PLWLSPRQVV VIPVAKPFTE YAQKVAKTFQ EAGLYAEVDL TDNTLNKKIR NAQTAQWNFI
MVVGQDELDA QAVNIRNRDD EVQGREETVA LSRAVEQIVK LKESKAAVSK FE