Gene CNB00390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00390 
Symbol 
ID3255704 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp110195 
End bp112146 
Gene Length1952 bp 
Protein Length514 aa 
Translation table 
GC content48% 
IMG OID638254690 
Producthypothetical protein 
Protein accessionXP_568780 
Protein GI58262740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAACAATATC TCAACTATCA ATTTCCTTTT CCCCCAACAA TGTGGCCCTT CCCTCTCTCT 
TTCCAGCCGG ACCACCGCAA CAACATGCTA CAACCGCAGC CCCCGCTGCC ACAGCACCAC
CACTCACATG CTCAACCCCA CCAGCATCAT AGCCCGGCTT CAAGACACGC TCAACGACCA
GAGTACACTG ATCAGGGGAA TTATGACTAC TCGTACTTGT TCAGACCCGA GCAACACCAT
TCATACGACC CCAGTGGTGG GAGTAGCAGT AGTAGTGGCA ACCAGCCAGT ATCAAATGGA
CGGACGGGAG CATCGCCATC CTCAACTCCG TGGAGCGGTG GTGGTCCGTA TACTGCGACA
TCGGGAATCG AGACCTCTTG GGATTGGTAT GCACGACAGC AAAGTCAAGG ATCGAGTCAG
CAGCAACAAA GAGACCCGCG TTCAATGGCG AATTTTGCTC AGGAACGATT GACTGGGTCG
TTTGGATGGC CAGAAAGTAG AAATGGCGGG AATGGGGGGG ATGGATATGG TCACTCATTA
TATGGGTCCT ATACCGGTAT AAAGAAGGAG GACAAGAAGG ATGGAGAACG GAGTGCGAAG
AAGCCAAGGG TGGATGCACC TTTTAACGTC GAAAATGAAT TAGCACAAGT AAGTCGTTTC
ACAAGCATGC TCAAGCAAAA CTAACAATTG AATAGCTTAA AATGCACTTA AATGAAATCA
TAAACCTAAT AAAACCTTTT GGTAAGCCTT CGTTGTATAC CCTTTCGAAC CGCATTAACA
CCCACACAGC TCCGCAAAAA GGCCAACCAG CGCCCGAACA ACCACCACCA CCATACCTTT
CCACCCGCTT CGCTCGTCTC TCTTCTGTCA TCCACGAATC TCTTCAAAAC CTCTCTCCTC
ATGTCCACGT CAACCTCTCT CCAGAGTTTG TACCCACATA CCAACCGCCC GAAAAGAAGG
TTACAGCTGC TAATGGCAGT GAGAAACGCT CGTCTCCTGC TCTTGGGACG GCGGGGGCAG
AGATGGATGG GAAGGGTCTA ACGAAGACGA AGACGGCAGA AGAATTGGCA GCGGCAGAGA
AGGAGATGGA AATCATAAAA AAGAGGAGAG ACGCTTTAAT TGCCAAGGCG CAGGCTGCGA
TAGCCAGGGG TGGGACACCG AAGGCGAACA ATGCCAAAGG CGGAAAGAAC GCCAACAAAA
CAAATGGCGG CAAGTCGAAT AAATCTAGTC CTCTCAAAGA CAATTCCACC AAGTCACTCC
CTCTATTTAC CCCTACCTCA CCTATCCCCC GTCTTCCTTC TCTGTTAAAC CATAACAATC
TCGAAGCATT AACCGGAGGG AGCGAATTCA GCTCATCTTT CCTTCCTCCG ATCACTACCA
CCATAAGTAC GGCGATGGCA GACCGTCTCG CTCAGGCACA GCCCGTCATA CAGCAAAGTT
TTCCACAAGA TTCGATGCCG TTTAGCATTT TTTCGCAAGA TAGTATGGCA TGGTTGAGAA
GATGCCATGG GTGTGGAAGT TCAGTCACGT CAGAATGGAG GACAGGACCT GATGGTCCGG
ATAGTTTGTG CGATATCTGT GGTGTAAGTC TCATTTATCA TTTCAGATTT CATCCTATGA
TATGCTAATG GTTCGTTTTG TAAAAAAAAT AGATGCACTA TGAACGGTTA TCAAGGAAGA
AGGATCTGTT ATCATTTCCA CAACCGGGAC ATATTGATGG AGATACAGCG TTTGTATTAG
GCTCATAGGT GTTGTAACGA ATCGATAGAT GCAAGTTCAG GCGTTTTAGG GTCCCATTTA
TATTCATAGA AACTACCTTA CGGGCGAGAC TTGAAGAAGA GAAAAAAAGA AGTTGCCTTG
TCGAAGTCGT GTTATTTTTT GATAGGTTCT GGGTAACTCA TGAGGGTTTT AATTCACTAT
AATACATTTT TGTGTCTGGT ATAATGGGCT CG
 
Protein sequence
MWPFPLSFQP DHRNNMLQPQ PPLPQHHHSH AQPHQHHSPA SRHAQRPEYT DQGNYDYSYL 
FRPEQHHSYD PSGGSSSSSG NQPVSNGRTG ASPSSTPWSG GGPYTATSGI ETSWDWYARQ
QSQGSSQQQQ RDPRSMANFA QERLTGSFGW PESRNGGNGG DGYGHSLYGS YTGIKKEDKK
DGERSAKKPR VDAPFNVENE LAQLKMHLNE IINLIKPFAP QKGQPAPEQP PPPYLSTRFA
RLSSVIHESL QNLSPHVHVN LSPEFVPTYQ PPEKKVTAAN GSEKRSSPAL GTAGAEMDGK
GLTKTKTAEE LAAAEKEMEI IKKRRDALIA KAQAAIARGG TPKANNAKGG KNANKTNGGK
SNKSSPLKDN STKSLPLFTP TSPIPRLPSL LNHNNLEALT GGSEFSSSFL PPITTTISTA
MADRLAQAQP VIQQSFPQDS MPFSIFSQDS MAWLRRCHGC GSSVTSEWRT GPDGPDSLCD
ICGMHYERLS RKKDLLSFPQ PGHIDGDTAF VLGS