Gene CNB00360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00360 
Symbol 
ID3255719 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp100513 
End bp104899 
Gene Length4387 bp 
Protein Length936 aa 
Translation table 
GC content50% 
IMG OID638254687 
Producthypothetical protein 
Protein accessionXP_568777 
Protein GI58262734 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0321355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGAC CGGTTGGTAT GAATACTCTT GCATTGAGTC AGCAGCAGCA GCATGCTCTC 
CAGCAAGCAC AGGCACGGCA ACAGCAAATT ATCCAGGCTC AAGCTCAAGT GCAAGCTCAG
GCTCAGGCTC AGGCTCAGGC TCAAACCCGA GCTGCTCAAT CAGGACAACA ACAGGCTAAC
CAACGTGTCG TTCCGCCATC CCCTCACCAT CCTTCCCCTT CACCACATAT GGACCACCAG
TTTCAACCCG ACATGGCGTA CCCTCATCCT CTTCAACAAG CGCCTGGTAT GCATGTGAGC
CAGATGTCTC CCCGTTCCGC AAGGGCTGTC TCTGGAATGC CACAAGGTGT TCAAGTAGAC
AATCCGGCTC ATCCGAAAAA TATGGCGGGT GGATCAGCGT GGATGCAAAA CGCCATGGCC
GGCCCTTTAC AACACTCTGG TCAACAACCA CAAAATCCTC AACAATCACA ATCCCAACAA
CCGCAACCCA TCTCTCATCA ACATCAACTC CAACCATCCC ATTTACCGCA TTCAACGCCC
ACTCCTCAAC ATCAAATGCC TCCGCAAATA CTCGGTCAGC CTCAAGGTTC AGGGCCTGGG
GCCGCACCAG GACAAGGTCC AGGTCAACGG ATGGCTCAAC AAATGGGACA TGCACAACAG
ATGGAGCAAG CAGAATATGG GTTAGGGATG TCGACGGGTA CGACAATGTC TCGAGCAACT
AACTCAAACC AAGGGCCTGT GAGATGGGAT GCGGATCATG CGTACGTTCC CCCTTTCTCC
TTCGTGGTAA TGGCTTTGCT AACGTAGATC TCAGTTTGAA AGCCTATGTA CATGATTACC
TGGTAAAGCA TGGATTTTCA GGGACTGCTG CTCAGTTCAA CATGGAAGCA GGTCTGAATG
ATGGGGGGAT CCCTGTCAAC GCTAGGGAAG GTGTTTTATA TGAGTTAGTT ATTGTCTGAA
GCGCACCTTT CACATTTCTG ACTCAGCGTA GATGGTGGAA TATTTTTTTG GAACTGTTCA
GTGCAGGAAG AGGCGTACAA GCCGTCATAC AACCAAGTTA CTACACCGAG GCAAGTCATT
TGAAGTCGTT GGTGGAACCT GTCTGACAAG ATCGTAATTA GTGCATGACA AGGATGCGCT
CATTTCGACA ACATCAGATG ATTAACAATG TCACGTACAC CGCGCAAAAC GTACAAACTG
CCGCCAATCA ACCTCCGCAG CCTGCTTTCA CTTCTCAGCA AATCATGGCT CTTCGACAGC
AAGCTCAAGC AATGGGTCTG TCTCCCCAGC AGGCGAATCA GTATGTTCAA CAGCAGGTGC
AGCAAATACA GCAGCAACAT CAGCAGCAAC AACAACAACT ACAACAGCAA CAACAACAAC
AACAGCAACA GCAACAGCAA CAGCAACAGC AACAACAGCA ACAACAACAA CAGCGACAAC
CGCAACAGCA GCAACAACAA CAACAGCAGC AACAACAACA ACAGCAACAA CAACAACAAC
AGCAACAACA ACAACAACAG CAACAACAGC AACAACAACA GCAACAACAA CAACATGCAA
TGATGCAGCA GCAACAGCAG CAGCGGTTCC AGTTTGCGCC CACCAGCTCA CCTGCAGCCA
TAGGAAGACC TGCTTCTCGA CAAGATCAGC AAGCTCAGCC CACCATGTAT CAACCCCAAC
CTCAAATGGA ACTCCAACCG CCTGCTGTTG TGCGTACCTC AAGTCATTCC CCCATCAATC
CTTCACCACA CATGGTGCAG CAACCTCATC CGGGTGTCAT GCCTTCCCCT AGCCAGCCCA
TGCGGCCACC TATCAGTGGT CTTATGGCCA ATGGTCAGAT GCGGATACCG TCTTCCGGAC
CTCCACCGGG TACAAGGCGC GGACAACCTC AGCCCCAGCC ACAGACTCAA GGTCACACCC
AGGGATACGT CGACCCCTCC CAGACCCCCA CTACCGCACC TAGTCCGGCC CAGGGCCATC
AAGCACATCC TCATCAACCT CAACCGGGAC AGACACAACA TCCGCATCAA CATACGCACC
ACCCCAATGC TCAACATATG CCTCAGCCAC AGCATCCGCA CATGACACCG ACTCAGCAGC
AACAACACAT GATTCAAAAT CAGTCGGTCA ATGTACAAAC TGCTCAACAA CGTGCCCAGC
AATCTCTGGC TGAAATGCAT GCCCAAGCCC AAGTTCAGGC GCAAGCCCAA CAACAGCAAC
AGCTGCTTCA TTCTCAGCAA CAAGCCCAAG CTCAAGCCGC TGCTCAAGCA GCTCAGCAAA
GGGAACAGGC TATCCAGGCT CAACAACAGC ACATACAGGC GGTGAACAGT CAGATGTGGG
AGGGGCTGGG ACTCGGGCAT GTCAATCATG GTGTAATGAA CTATAGTGCT CAGAGTCTGG
GGCTGGGTGG GAAAGATCCA CAGTCAATGG ATGAGGAGGA AAAGGTGAGC CACATTCCAT
TGTTAGTATC GCAACAGAAG GACAGCAAAT AATGGCTTGA TAGCAACGCT TGATACATAC
GTATAAGCTA ACTCTCCAAG AGAACCAGCG GAAAGCAATG ATGGGTGCTC AGCAATCTCA
ACAGCAAACG CCTCAGATGC AACATCAAGG CCAGGGGGGT CCAGGACAGC TGCATCAGAA
TCAGCAATAC ACGATGATGC CGCATCAGCA GTCTGTGCAC CCGCAAGGGT ATCCAGACAT
GAGGTGAGTA AACATGGTCT ACTTACGTGA CGCAACAACT GACTAAGATG ACATGTAGAC
CCAACGGTAC TATGACTCGC AACCAGTCTT ATGAGCTTTC TCAACAGCAG CAGCCTCAGG
AGGAAAATAA GGCTGCACCT ACACCCGGAT CATTGAATCA GTCAACAAAT AACTCTTCTT
CGGCATCTCA ATCCGCTTCG ACTCCTACAA CATCTACTGC AAACAAGCCC TCGCCGCCAG
AAAGGAAGCG CAAAAGGAAG AACTCAGAGA AGGAAAACAA GCCGTCAAGT CCGTTTGGGA
TGTCCCAATT CGGGCAAGGA CAAGCGGGCC AGGGACAGCA AGGCCCAAAT GCCGGAGCAG
CGGGGCCTGT AACATCCGGG GCTAATGCTA CTAATGATCC CGTAAGTTTC ATGTGAACTT
CAACATACAC AGTAGGTTTG GAAACTGAAA GTCTTGGACG TAGATGCGTT CCATACCTGG
CACAGCACCG CCACGTCCTG TTTCGGCTTC ACCACGCAAT CCTACAAGAC GTGAGAAACG
GAACCAAGCT AAAGAGATGT TGCCCCCGCG CACTACGACA CCAAAACCAG CTTCTGGTGG
CGGTGCAAAT GCGGAGACTG ATGCACGAGA GATGAAAGAA CGGAAGGAGA CGACTGGACG
AGGGGGAAAA GTCAGTAGGA CACCGAAAAT GCCCAAGGAG GAATTACTGG TGAGTGCGAT
GAACAATGAA CAACGGTTAT GTTTAACGCT AATGTTCGGA TAGCGGGAGG TCCCCACACC
TAAATCATTG AATCTATCTC CTAACGGCAA TGTAATAACT GTCACCGACG TTAATCCTAA
TTCGGCATCC ACCCATGGTT TCACCCCTTC TCCACCATCA GCATCAACCT CCACCCCTGC
GAATGGCGCA CTATCGCTGC CTTCTACAAC ACCTGCCAGT GGCCAAATAT CTCTTCCCAA
CGACCTTTCC ATGTCTCACA TGGACTTTGG CATGGGCTTA GGTAGCATGG GTTTGGGTGG
CATGGGCATG GAGTTCGCCA TGGGCATGGG CCTCGGTGCG CTCGGCGGGA TAAACGACAA
CAATCGTCAA GGGATGGGAA ACAATAATGG CGGACCTGGA GGCAACAACA GCCTTGAAGA
TAACCATGGG GGGGATGCGA ACGCGGGGAG TGATTTGGAT GCGTTAGCAG GCATAGGACA
AGATTTCGAT TTTGGATTGT ACCTCGCCGC TCTGGATGAG GAAGGCGACA ACGGAGGGAG
CAACGGAGGA AGTGGTGGGA ATGGGGAGGT GATTGTATAA ATGCCAGTGA CATGGGTTAG
AGGGCGCGAG GGAAAGAGAA ACATCATTTT GGCAATATCG CATTCTGTTC GTCAAAAAGT
TAATAATCCC TTGCAGAGAG AGGTTCAAGG AATCGAATAA GGTCTGTCGC CACGTTTCAT
GGTCATCTAC TCTTGTGTCT TTCTACTATT TGTCTTTTTT CTTTCTGCTT TACATTCATC
AGTCACTGGT CTTTCCATAT ACCCATTCAT CTTTCTTGCG TTTTTGTTTT CTTTTTCATG
GTAATGATCT CTCTTGTCAG GTGTTATCGG TCAATATTCA ATATATAATG ATTTCTCTAC
TTTTGCTGCC ATCTGGCTGA GAGATAGATG TGCGTGTCCT TGACATAGCT TATGCATAGT
GCGTACA
 
Protein sequence
MVRPVGMNTL ALSQQQQHAL QQAQARQQQI IQAQAQVQAQ AQAQAQAQTR AAQSGQQQAN 
QRVVPPSPHH PSPSPHMDHQ FQPDMAYPHP LQQAPGMHTI RLIRKIWRVD QRGCKTPWPA
LYNTLVNNHK ILNNHNPNNR NPSLININSN HPIYRIQRPL LNIKCLRKYS VSLKVQGLGP
HQDKVQMINN VTYTAQNVQT AANQPPQPAF TSQQIMALRQ QAQAMGLSPQ QANQYVQQQV
QQIQQQHQQQ QQQLQQQQQQ QQQQQQQQQQ QQQQQQQQRQ PQQQQQQQQQ QQQQQQQQQQ
QQQQQQQQQQ QQQQQQQQHA MMQQQQQQRF QFAPTSSPAA IGRPASRQDQ QAQPTMYQPQ
PQMELQPPAP QHPHMTPTQQ QQHMIQNQSV NVQTAQQRAQ QSLAEMHAQA QVQAQAQQQQ
QLLHSQQQAQ AQAAAQAAQQ REQAIQAQQQ HIQAVNSQMW EGLGLGHVNH GVMNYSAQSL
GLGGKDPQSM DEEEKQRLIH TYKLTLQENQ RKAMMGAQQS QQQTPQMQHQ GQGGPGQLHQ
NQQYTMMPHQ QSVHPQGYPD MRPNGTMTRN QSYELSQQQQ PQEENKAAPT PGSLNQSTNN
SSSASQSAST PTTSTANKPS PPERKRKRKN SEKENKPSSP FGMSQFGQGQ AGQGQQGPNA
GAAGPVTSGA NATNDPMRSI PGTAPPRPVS ASPRNPTRRE KRNQAKEMLP PRTTTPKPAS
GGGANAETDA REMKERKETT GRGGKVSRTP KMPKEELLRE VPTPKSLNLS PNGNVITVTD
VNPNSASTHG FTPSPPSAST STPANGALSL PSTTPASGQI SLPNDLSMSH MDFGMGLGSM
GLGGMGMEFA MGMGLGALGG INDNNRQGMG NNNGGPGGNN SLEDNHGGDA NAGSDLDALA
GIGQDFDFGL YLAALDEEGD NGGSNGGSGG NGEVIV