Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB00360 |
Symbol | |
ID | 3255719 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 100513 |
End bp | 104899 |
Gene Length | 4387 bp |
Protein Length | 936 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254687 |
Product | hypothetical protein |
Protein accession | XP_568777 |
Protein GI | 58262734 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3064] Membrane protein involved in colicin uptake |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0321355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGAC CGGTTGGTAT GAATACTCTT GCATTGAGTC AGCAGCAGCA GCATGCTCTC CAGCAAGCAC AGGCACGGCA ACAGCAAATT ATCCAGGCTC AAGCTCAAGT GCAAGCTCAG GCTCAGGCTC AGGCTCAGGC TCAAACCCGA GCTGCTCAAT CAGGACAACA ACAGGCTAAC CAACGTGTCG TTCCGCCATC CCCTCACCAT CCTTCCCCTT CACCACATAT GGACCACCAG TTTCAACCCG ACATGGCGTA CCCTCATCCT CTTCAACAAG CGCCTGGTAT GCATGTGAGC CAGATGTCTC CCCGTTCCGC AAGGGCTGTC TCTGGAATGC CACAAGGTGT TCAAGTAGAC AATCCGGCTC ATCCGAAAAA TATGGCGGGT GGATCAGCGT GGATGCAAAA CGCCATGGCC GGCCCTTTAC AACACTCTGG TCAACAACCA CAAAATCCTC AACAATCACA ATCCCAACAA CCGCAACCCA TCTCTCATCA ACATCAACTC CAACCATCCC ATTTACCGCA TTCAACGCCC ACTCCTCAAC ATCAAATGCC TCCGCAAATA CTCGGTCAGC CTCAAGGTTC AGGGCCTGGG GCCGCACCAG GACAAGGTCC AGGTCAACGG ATGGCTCAAC AAATGGGACA TGCACAACAG ATGGAGCAAG CAGAATATGG GTTAGGGATG TCGACGGGTA CGACAATGTC TCGAGCAACT AACTCAAACC AAGGGCCTGT GAGATGGGAT GCGGATCATG CGTACGTTCC CCCTTTCTCC TTCGTGGTAA TGGCTTTGCT AACGTAGATC TCAGTTTGAA AGCCTATGTA CATGATTACC TGGTAAAGCA TGGATTTTCA GGGACTGCTG CTCAGTTCAA CATGGAAGCA GGTCTGAATG ATGGGGGGAT CCCTGTCAAC GCTAGGGAAG GTGTTTTATA TGAGTTAGTT ATTGTCTGAA GCGCACCTTT CACATTTCTG ACTCAGCGTA GATGGTGGAA TATTTTTTTG GAACTGTTCA GTGCAGGAAG AGGCGTACAA GCCGTCATAC AACCAAGTTA CTACACCGAG GCAAGTCATT TGAAGTCGTT GGTGGAACCT GTCTGACAAG ATCGTAATTA GTGCATGACA AGGATGCGCT CATTTCGACA ACATCAGATG ATTAACAATG TCACGTACAC CGCGCAAAAC GTACAAACTG CCGCCAATCA ACCTCCGCAG CCTGCTTTCA CTTCTCAGCA AATCATGGCT CTTCGACAGC AAGCTCAAGC AATGGGTCTG TCTCCCCAGC AGGCGAATCA GTATGTTCAA CAGCAGGTGC AGCAAATACA GCAGCAACAT CAGCAGCAAC AACAACAACT ACAACAGCAA CAACAACAAC AACAGCAACA GCAACAGCAA CAGCAACAGC AACAACAGCA ACAACAACAA CAGCGACAAC CGCAACAGCA GCAACAACAA CAACAGCAGC AACAACAACA ACAGCAACAA CAACAACAAC AGCAACAACA ACAACAACAG CAACAACAGC AACAACAACA GCAACAACAA CAACATGCAA TGATGCAGCA GCAACAGCAG CAGCGGTTCC AGTTTGCGCC CACCAGCTCA CCTGCAGCCA TAGGAAGACC TGCTTCTCGA CAAGATCAGC AAGCTCAGCC CACCATGTAT CAACCCCAAC CTCAAATGGA ACTCCAACCG CCTGCTGTTG TGCGTACCTC AAGTCATTCC CCCATCAATC CTTCACCACA CATGGTGCAG CAACCTCATC CGGGTGTCAT GCCTTCCCCT AGCCAGCCCA TGCGGCCACC TATCAGTGGT CTTATGGCCA ATGGTCAGAT GCGGATACCG TCTTCCGGAC CTCCACCGGG TACAAGGCGC GGACAACCTC AGCCCCAGCC ACAGACTCAA GGTCACACCC AGGGATACGT CGACCCCTCC CAGACCCCCA CTACCGCACC TAGTCCGGCC CAGGGCCATC AAGCACATCC TCATCAACCT CAACCGGGAC AGACACAACA TCCGCATCAA CATACGCACC ACCCCAATGC TCAACATATG CCTCAGCCAC AGCATCCGCA CATGACACCG ACTCAGCAGC AACAACACAT GATTCAAAAT CAGTCGGTCA ATGTACAAAC TGCTCAACAA CGTGCCCAGC AATCTCTGGC TGAAATGCAT GCCCAAGCCC AAGTTCAGGC GCAAGCCCAA CAACAGCAAC AGCTGCTTCA TTCTCAGCAA CAAGCCCAAG CTCAAGCCGC TGCTCAAGCA GCTCAGCAAA GGGAACAGGC TATCCAGGCT CAACAACAGC ACATACAGGC GGTGAACAGT CAGATGTGGG AGGGGCTGGG ACTCGGGCAT GTCAATCATG GTGTAATGAA CTATAGTGCT CAGAGTCTGG GGCTGGGTGG GAAAGATCCA CAGTCAATGG ATGAGGAGGA AAAGGTGAGC CACATTCCAT TGTTAGTATC GCAACAGAAG GACAGCAAAT AATGGCTTGA TAGCAACGCT TGATACATAC GTATAAGCTA ACTCTCCAAG AGAACCAGCG GAAAGCAATG ATGGGTGCTC AGCAATCTCA ACAGCAAACG CCTCAGATGC AACATCAAGG CCAGGGGGGT CCAGGACAGC TGCATCAGAA TCAGCAATAC ACGATGATGC CGCATCAGCA GTCTGTGCAC CCGCAAGGGT ATCCAGACAT GAGGTGAGTA AACATGGTCT ACTTACGTGA CGCAACAACT GACTAAGATG ACATGTAGAC CCAACGGTAC TATGACTCGC AACCAGTCTT ATGAGCTTTC TCAACAGCAG CAGCCTCAGG AGGAAAATAA GGCTGCACCT ACACCCGGAT CATTGAATCA GTCAACAAAT AACTCTTCTT CGGCATCTCA ATCCGCTTCG ACTCCTACAA CATCTACTGC AAACAAGCCC TCGCCGCCAG AAAGGAAGCG CAAAAGGAAG AACTCAGAGA AGGAAAACAA GCCGTCAAGT CCGTTTGGGA TGTCCCAATT CGGGCAAGGA CAAGCGGGCC AGGGACAGCA AGGCCCAAAT GCCGGAGCAG CGGGGCCTGT AACATCCGGG GCTAATGCTA CTAATGATCC CGTAAGTTTC ATGTGAACTT CAACATACAC AGTAGGTTTG GAAACTGAAA GTCTTGGACG TAGATGCGTT CCATACCTGG CACAGCACCG CCACGTCCTG TTTCGGCTTC ACCACGCAAT CCTACAAGAC GTGAGAAACG GAACCAAGCT AAAGAGATGT TGCCCCCGCG CACTACGACA CCAAAACCAG CTTCTGGTGG CGGTGCAAAT GCGGAGACTG ATGCACGAGA GATGAAAGAA CGGAAGGAGA CGACTGGACG AGGGGGAAAA GTCAGTAGGA CACCGAAAAT GCCCAAGGAG GAATTACTGG TGAGTGCGAT GAACAATGAA CAACGGTTAT GTTTAACGCT AATGTTCGGA TAGCGGGAGG TCCCCACACC TAAATCATTG AATCTATCTC CTAACGGCAA TGTAATAACT GTCACCGACG TTAATCCTAA TTCGGCATCC ACCCATGGTT TCACCCCTTC TCCACCATCA GCATCAACCT CCACCCCTGC GAATGGCGCA CTATCGCTGC CTTCTACAAC ACCTGCCAGT GGCCAAATAT CTCTTCCCAA CGACCTTTCC ATGTCTCACA TGGACTTTGG CATGGGCTTA GGTAGCATGG GTTTGGGTGG CATGGGCATG GAGTTCGCCA TGGGCATGGG CCTCGGTGCG CTCGGCGGGA TAAACGACAA CAATCGTCAA GGGATGGGAA ACAATAATGG CGGACCTGGA GGCAACAACA GCCTTGAAGA TAACCATGGG GGGGATGCGA ACGCGGGGAG TGATTTGGAT GCGTTAGCAG GCATAGGACA AGATTTCGAT TTTGGATTGT ACCTCGCCGC TCTGGATGAG GAAGGCGACA ACGGAGGGAG CAACGGAGGA AGTGGTGGGA ATGGGGAGGT GATTGTATAA ATGCCAGTGA CATGGGTTAG AGGGCGCGAG GGAAAGAGAA ACATCATTTT GGCAATATCG CATTCTGTTC GTCAAAAAGT TAATAATCCC TTGCAGAGAG AGGTTCAAGG AATCGAATAA GGTCTGTCGC CACGTTTCAT GGTCATCTAC TCTTGTGTCT TTCTACTATT TGTCTTTTTT CTTTCTGCTT TACATTCATC AGTCACTGGT CTTTCCATAT ACCCATTCAT CTTTCTTGCG TTTTTGTTTT CTTTTTCATG GTAATGATCT CTCTTGTCAG GTGTTATCGG TCAATATTCA ATATATAATG ATTTCTCTAC TTTTGCTGCC ATCTGGCTGA GAGATAGATG TGCGTGTCCT TGACATAGCT TATGCATAGT GCGTACA
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Protein sequence | MVRPVGMNTL ALSQQQQHAL QQAQARQQQI IQAQAQVQAQ AQAQAQAQTR AAQSGQQQAN QRVVPPSPHH PSPSPHMDHQ FQPDMAYPHP LQQAPGMHTI RLIRKIWRVD QRGCKTPWPA LYNTLVNNHK ILNNHNPNNR NPSLININSN HPIYRIQRPL LNIKCLRKYS VSLKVQGLGP HQDKVQMINN VTYTAQNVQT AANQPPQPAF TSQQIMALRQ QAQAMGLSPQ QANQYVQQQV QQIQQQHQQQ QQQLQQQQQQ QQQQQQQQQQ QQQQQQQQRQ PQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQHA MMQQQQQQRF QFAPTSSPAA IGRPASRQDQ QAQPTMYQPQ PQMELQPPAP QHPHMTPTQQ QQHMIQNQSV NVQTAQQRAQ QSLAEMHAQA QVQAQAQQQQ QLLHSQQQAQ AQAAAQAAQQ REQAIQAQQQ HIQAVNSQMW EGLGLGHVNH GVMNYSAQSL GLGGKDPQSM DEEEKQRLIH TYKLTLQENQ RKAMMGAQQS QQQTPQMQHQ GQGGPGQLHQ NQQYTMMPHQ QSVHPQGYPD MRPNGTMTRN QSYELSQQQQ PQEENKAAPT PGSLNQSTNN SSSASQSAST PTTSTANKPS PPERKRKRKN SEKENKPSSP FGMSQFGQGQ AGQGQQGPNA GAAGPVTSGA NATNDPMRSI PGTAPPRPVS ASPRNPTRRE KRNQAKEMLP PRTTTPKPAS GGGANAETDA REMKERKETT GRGGKVSRTP KMPKEELLRE VPTPKSLNLS PNGNVITVTD VNPNSASTHG FTPSPPSAST STPANGALSL PSTTPASGQI SLPNDLSMSH MDFGMGLGSM GLGGMGMEFA MGMGLGALGG INDNNRQGMG NNNGGPGGNN SLEDNHGGDA NAGSDLDALA GIGQDFDFGL YLAALDEEGD NGGSNGGSGG NGEVIV
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