Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB00340 |
Symbol | |
ID | 3255946 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 92464 |
End bp | 95787 |
Gene Length | 3324 bp |
Protein Length | 1029 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254685 |
Product | conserved hypothetical protein |
Protein accession | XP_568775 |
Protein GI | 58262730 |
COG category | [S] Function unknown |
COG ID | [COG5644] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00258209 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGAC AATCAAAGCC ATTCACGGCA TCTACTGTTT CACAAGAAAA GCCCAAGAAG CAGGTGATCA AGAAGAAAAG GCTTGACCCC GCCAACGCAT ACACCTACCT CCCGTCTCTC CCCAAACGCC ACCGTACATC CGCCTTCCAG AACTCGCTCA GTTACGAAGA ACTCCAACAG GCCAAGGAGT CGTCCAAGGG ACGCCATTAT GATGGTGAAG ACGATGAAGA ATCTATGCAG GCGAGGGTGC GAAAAGTTGC GATGATGATT GCTTCTGAAG GGCCTCAAGA AGTGGATAGC GAAGAAAGTG AAGTGGACTC TGACGAAGCA TGGGAGAGTG ATGGAAGTGA CGAAGAGAGA TGGGGAGATG TATTTAAAGA GCTAGAAAAG GGAAAAGGGA AGAAGAAGGC AAAAGACGTA GTCAGAAAAG TCGGTACGAC TTTTTATGGT TCAAGGCGCC GGAAAACTGA CAGTTGTTAC AGCCTGCGAA ACCATTGACT GTCAATCTTG ATGAAAGCGA CGGTGAAGCC CCCAAAGAAA TTGCCAATAA TTCAACCGTT CCTATCTCTC CTGAGTCTGC AGAAGAAGAC GAGGATAATG ATGATGACGA GGATGAGGAT GAGGATGATG ACGAGGATGA GGATGAGGAT GAGGATGAGG ATGAAGACGA AGACGAAGAC GGATTGTCGG AACTTTCAGC GGAAGAGGAA GACCCCGACA CGCTTGCCGA CCTTGACGCT TTTGTCGACC AACTCGCCGC GTCCGACAAG AAACGCAAAG CTACAGAGAC CGACGCCGAT TCTTCAGCTG AGCAGAAGAA GAGACGGGTC TTGCCTGTCA AGTTTAGGCA AGAGATCAAG GATGACGCAG CTTTGAAGAG CAGTAAGTTT GTCAAATATC CCGCTCTGTT TGCATAAAAC GCTAAACCAT GCCGTTAGAC CAAAAATTGG ATATCTCCGC TCTCATTTCA TCCCACCCCT CTCTCGCTTC CGCCTCTGCT CTTATCAAAC CCTCCAAACC ATCCACTACC AAGTCAGTCC TCAAGGGCGG TGTTCTTGCT GCTCCTCTTC CTACCGTCCA ACAAGAACGA CTTGACCGCG AGGCCGCTTA CGCCCAAACC AAAACTGAAG GCCAAAAATG GTCTACCTTG ATGAAACGAG TCAAAGAGGC CGAACACTTG TCCTTCCCTC TCCAAGCAAA GGACCGCGGT GGCGTCAAAT CTTCCAGCGA GATTCTTGCC GGTTTCAAGC CTCAAAATGA AATGGAATCT GCCGTCGAAG CACTCTTAAA AAAGGCCAAC CTGACAGAGG ACGAGCTCAC GAAGCATGAA GATCTCCAGA TGGAAGCTCG TGAAATGACG GAAGAAGAAA TTAAAGCTCG TCGAGCTGAA CTTCGATACC AGCGTGAACT TCTTTTCCGC GCTGAAGCCA AAGCTAAGCG CGTGGCCAAG ATCAAGTCCA AGACATTTAG GAAACTTGCG AGGAAACGAG CAGCAAAGGA GAACCCCGGG ATGGCGTTGG AGGACCTCGA GAGGCTTGAT CCCGAGGCGG CGCAGATTGA GAGAGAGAAG ATTGAGCGTG AGCGAGCAAA GGAGCGAGCA ACCTTGAGAC ATGGCGCGAA GAGCAGGTGG GCAAGGGGGG TCGGTGGTGA AGCTGATGAT GACGAGAGGA TGGCAAAGGA AGCAATGTTG GATATGAAGG AGAAGCTGTT GAGGAAGATT CAGGGTAAGG ATGAGGGTTC ATCCTCCGAA GAAGAGAGCG AAGACGAGGA AGAAGATGAA GAAACCGTCA AGGCCAAGGC GTTTGACCAG CTCGCTCAGC TCAACTCTGA TTCCGGTGCG GCCTCACAAG CTCAAGGCAA AAAGGGTCTC ATGCAAATGA AGTTTATGCA AAAGGCGCAA GAAAGGAGGA TGAAAGAAGT CGCAGAGCAA GAGAAGGATG CTCGTATGCA AATCGAGCTC TTTGGTGAGG ATGGCGAAAG AGAGGAAGAG AGTAGTAACG AGAGTGATGA GGAGCCAGCC GTTGTTAATG TTGGTGGGAA TGAAGGAAGA CTCAAGTTTA GCGGTCCTAC TCCTGGCGTA AGTTATCTCG CACAAGCCCA TGTAGTTCAA AGGACTGATA CCCCTCTTCA CAGACCGGCG CTTCCGAATC ACCAGCTCTT CCTGCTCCTT CAGTCCAAGA CCCCGTCCCC GCATCCAAAT CCAAATCCAT CTTTACCCGT GCCCCTTCTC CCCCTCCTGT AGACTCCAAT CCGTGGCTCA CCGCTACCAA CTCCTCCGGC CCCTCTCGAA AACGTCACGC CCAACTTGGA TCCCAGCTTA ACGACGAGAC CAAGGCTGTT AAAGCTATCA AGAAGGCAAG CAAGAGAAGA GAGGATGAAG AGGAGGATGA GAGGGTTGAT ATTGATGTGG AGGCACCCAT CGCCACCAAA TCAGTGGATA TCTCAAATAA TAAGGGTAAG ACTAAGGGTA AGACCTCTAT TGCTGCGATT GCGGCGGTCC AAGCGGACGA ACAGGAAGAA GATGAGGAAA TTGCAGACTT GCTTCCTGCC AGCGGCGTTA AAGCATTCAA ACAACGTGAT CTTGTTGCTG AAGCGTTTGC GGGTGATAAT GTCGTGGAGG ACTTTGCGAC TGAAAAGGCC AGACAGATTG AGGCGGATGC TCCAAAGGTT GAAGATACCT CACTCCCTGG ATGGGTAAGC TTCATATTCT TCCGAAGCAA AACCAAGCTA TTCTAGGTGG CTGACGGAAG AGAAATATTT TAGGGATCAT GGGGCGGTAA GGGTGCAAAG AAGCGCAAAG CCAATCCGAA ATTCCTCGTC AAGACGGCCG GTATCGAGCC TATTGCCCGA AAGGACTTTG CCCATTCCAA TGTTATCATC ACCGAGAAGA AGGACAGGAA GGCGTCCCAA TTCCAGCTCA AGGACTTGCC TTATCCTTAC ACGAGCAAGG AGCAGTATGA GAAGAGCTTT GAAGTGCCAG TGGGTAGTGA ATGGAATAGT AGGAGCGGGT TCCAGAGAGG CACTCTGCCC AGGGTTGTCA AAAAGGCAAG TTCGGCTCAT GACATTGGAT TCACTCGAAA AGCTGACAAT TCTTATAGCC TGGAGCCATT ATCGAACCTG TCAGGAGACT GTTCTAGGCT TCGTATATTA TGTAATGTAT TGTGCGCACT TTTGATGTTT AGTATGCATT CGTCGAGCTT GTTATGCCAG GTGTTCGCAG TCTGTTTCTT ATACACCCTT TCCCGTCAGC CTTTTTTCGG CCTGGACAAC TTTACACCTC TCGCCCCTTG TAGTTTTATT ACCGACACCA TTAATCTAAT CTAA
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Protein sequence | MARQSKPFTA STVSQEKPKK QVIKKKRLDP ANAYTYLPSL PKRHRTSAFQ NSLSYEELQQ AKESSKGRHY DGEDDEESMQ ARVRKVAMMI ASEGPQEVDS EESEVDSDEA WESDGSDEER WGDVFKELEK GKGKKKAKDV VRKPAKPLTV NLDESDGEAP KEIANNSTVP ISPESAEEDE DNDDDEDEDE DDDEDEDEDE DEDEDEDEDG LSELSAEEED PDTLADLDAF VDQLAASDKK RKATETDADS SAEQKKRRVL PVKFRQEIKD DAALKSNQKL DISALISSHP SLASASALIK PSKPSTTKSV LKGGVLAAPL PTVQQERLDR EAAYAQTKTE GQKWSTLMKR VKEAEHLSFP LQAKDRGGVK SSSEILAGFK PQNEMESAVE ALLKKANLTE DELTKHEDLQ MEAREMTEEE IKARRAELRY QRELLFRAEA KAKRVAKIKS KTFRKLARKR AAKENPGMAL EDLERLDPEA AQIEREKIER ERAKERATLR HGAKSRWARG VGGEADDDER MAKEAMLDMK EKLLRKIQGK DEGSSSEEES EDEEEDEETV KAKAFDQLAQ LNSDSGAASQ AQGKKGLMQM KFMQKAQERR MKEVAEQEKD ARMQIELFGE DGEREEESSN ESDEEPAVVN VGGNEGRLKF SGPTPGTGAS ESPALPAPSV QDPVPASKSK SIFTRAPSPP PVDSNPWLTA TNSSGPSRKR HAQLGSQLND ETKAVKAIKK ASKRREDEEE DERVDIDVEA PIATKSVDIS NNKGKTKGKT SIAAIAAVQA DEQEEDEEIA DLLPASGVKA FKQRDLVAEA FAGDNVVEDF ATEKARQIEA DAPKVEDTSL PGWGSWGGKG AKKRKANPKF LVKTAGIEPI ARKDFAHSNV IITEKKDRKA SQFQLKDLPY PYTSKEQYEK SFEVPVGSEW NSRSGFQRGT LPRVVKKASS AHDIGFTRKA DNSYSLEPLS NLSGDCSRLR ILCNVLCALL MFSMHSSSLL CQVFAVCFLY TLSRQPFFGL DNFTPLAPCS FITDTINLI
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