Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB00290 |
Symbol | |
ID | 3255986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 79756 |
End bp | 81237 |
Gene Length | 1482 bp |
Protein Length | 467 aa |
Translation table | |
GC content | 51% |
IMG OID | 638254680 |
Product | expressed protein |
Protein accession | XP_568770 |
Protein GI | 58262720 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000223097 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATGCG TTATCATTTG CCATCTCCTC GCTCGACCCC CCAACTTTAA TCATTCATAC GTACATCTTG CAAAAGTCCT CGTACGAATC AGATCACCAA TCATGACTTT AGCCAGTACC CAGGTCGGCC AGACCCCCGA TATTCTGCAA CTTATCTGCT CTTATTTGCC CCCCTCGACA CTGTTCTCCT GCCTCCTGAC GTCTTCCACA TTCTTCCATT CTTCCGCACC AGAGCTGTAT CGTTCACTTC ATATCAAGCA TGCAAGAGAC TGTTTTGTGG GCGCTACAAG ACAGTCGAAC GGCTTCTACA CGTCATCGTC CGCCTCGCCC ACCTCCTCCT CTTCTTCTTC CACAACAACT CGACCACGAC CCATCTCCCC GTACAGCAAA GACGCTGTAC TGTCCTTTGT ACGAAAAGTA CATATTCACA CGCACGGGAG GAATGAATGC CCCTTTGTGC TCCACTACAT TAACCCGCTA CCGCACTTGG AATATGTTCA TTTAGCAGGG GGAGTTTGGC CTGCTGAGCT CGCAGCGGGA GATATATGCG ATCCCGAGAC ATGCCAGTTT CTCGCCAAGG TTTGCACCCG TGCGAAGAAG GCGATGATAA GACAAGCAAA CCTCGGCCCT CTCAAATTAT TAACCAGTTT AGAGCACGTC ACCGTCAAGA TACGACCGTG CCAACTTCCG CTCTACATCT TCCACGATAC AGCTTACCAA TGGTCGTACC CCGTGCCTAT ATCTAGCGCC AGGATCGTGG ATTTGGTCTT TTGGGACGAA CGGCATTCAT TCCGTATTGA ATGGCGTAAC GTCCCAGGTG GCGGAATGAG GTCGTCTTTG ATGGGCTTGA GGTACCAGCT ACCATCTCCA TACCTCGGAG GCGAATCAAT CATGCTCAAG GGCTGCACAT ATTGCGACGA GCGGGGTTGT ATCAGGCATA CTCCACATGC CGCCGTGCAG CTTCCGGCCC TGATGGCGAC ATTGGGTTCG CTTATGAATG TGAAGACGAT CAGGGTATGG AATGTGGACC ACACTGCCCG GAGACAATGG AAGCAGGGTA TGGTCACTGT AGAAACAGTG AAAAGACGGA TGGAAGAGGC ATGGCTGAAA GCCCGATCGG AGGATTTAGA TTGTGGGGGC CACGACGAGC AGGAACTTGA CCAAGGTCAA CAAACAGGCG TTTCATTCCA CTCTGCCAGC GAGTATTTTA CCTCGGCCCA ATTTGACATG GAGACCGATC AAGAAGAGGC CAAGTACTGG CAAAACCTCG TAGAACCCAG TCAAGCGGTA CTACGTCTAC GCCGACAAGT CCAAGATATG TTTGGGGGAG ATGACGAGGC GTTCGACCGG TACTCTGAAA GGGAGTTGGA GGGGTTAGTG GAAAACGAGA GATGGAGGCG ATGAATTAGC GGAGCAGCAT TCTTGGCTAC GTTACTGGGC GACTATGTAC TTCTTGAATA TTAGACTACT CAAGCACTAG GA
|
Protein sequence | MSCVIICHLL ARPPNFNHSY VHLAKVLVRI RSPIMTLAST QVGQTPDILQ LICSYLPPST LFSCLLTSST FFHSSAPELY RSLHIKHARD CFVGATRQSN GFYTSSSASP TSSSSSSTTT RPRPISPYSK DAVLSFVRKV HIHTHGRNEC PFVLHYINPL PHLEYVHLAG GVWPAELAAG DICDPETCQF LAKVCTRAKK AMIRQANLGP LKLLTSLEHV TVKIRPCQLP LYIFHDTAYQ WSYPVPISSA RIVDLVFWDE RHSFRIEWRN VPGGGMRSSL MGLRYQLPSP YLGGESIMLK GCTYCDERGC IRHTPHAAVQ LPALMATLGS LMNVKTIRVW NVDHTARRQW KQGMVTVETV KRRMEEAWLK ARSEDLDCGG HDEQELDQGQ QTGVSFHSAS EYFTSAQFDM ETDQEEAKYW QNLVEPSQAV LRLRRQVQDM FGGDDEAFDR YSERELEGLV ENERWRR
|
| |