Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB00210 |
Symbol | |
ID | 3255884 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 62224 |
End bp | 64099 |
Gene Length | 1876 bp |
Protein Length | 367 aa |
Translation table | |
GC content | 49% |
IMG OID | 638254672 |
Product | serine/threonine kinase receptor associated protein, putative |
Protein accession | XP_568762 |
Protein GI | 58262704 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00228942 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TACATCTCAA CTTCTCCAAG TCTTATCCTC TCCTTCCCCC AAAAACCTCG TCTTCACCGC CCTCACCCCG GCTCTCCGCT CACATCCGCC TTCCGCTCTA CCTTTTGGCA TTTCGATCAT CCCGCTGCGC ACTCCGGATC CCACACTGCA CCTCTAATCA CTTCAGCTGT CATTCATAAC TGCACAACAC ATATTTATCA TACCATTAGT GCTCTACCAC ATTGCCACTC TATCAATAAC GACTGAACGA CAATCTAGAA CATACCGATC CGATCGAAAC GATACTCCAC GCGCAACCTT GACGGTGTAA TTGCGTCTCC TTTTACGTCC CATAGACCTC TCTTATACTT GCGAACCAAA TCATTATACC ACATCACTCA AAATCTAATC TACAATATTC ACTGCAATAT CAACCATGCA GGGATACAGC AACGGCTACT CGACTCTTCC GCCGTCTCTT AACCCTAATC CTGTGATTGG GCAATACGCT CCGTCTCAGC AAGTGCAGCT TTCCGGTCAG CCTCGTCTTG GTTCGGTCCC TTCTTCTCAA TCAAATGAAA CTATCAAGGT CCAGCCATTG TTGTGCTCTG GCCACACTAG GCCTGTAACA CATCTCCAAT TCTCAAACGT GTGCGTGGTC GGTGATCGAG CTAAGTGTAA TAATACGATA CTGATGTGCG AGCAGGCTTG ACGACGGAAC ATATCTCTTG ATCTCAGCGT GTAAGGATGG AAATCCCATG CTCCGGAGCT GGCTCGGAGA CTGGATCGGT ACTTTCATCG GTATGTTACG GTAGCTTTGA TTCAATTATA TGCTAACAGA AATATAGGAC ACAAGGGTGC TGTGTGGTCT TCCAAAATTT CACTCGATAC TTCTCGAGCT GTTACCGGTA GTGCGGATTT CACTGCGTAC GTTACGCATG CGAATGGATG ATGATAGATG GGTGATGACG AGTGTTGATG ATGGATATTA GGAAGATCTG GGATACCTAC AGTGGCGAAG CCCTTCACAC TTTTTCTCAC AACCACATTG TCCGCTCTGT CGCCTTGAAC CCTCAACAAA CCCCCCAATA CCTCCTTACT GTGAGTAATC GCTTATATTT GCCTGCAGGA CTTGTCTGAT GGCGAATGAC AGGGTGGACA CGAGAAGAAA ATCCGTCTCT TTGACCTTGG CCGACCTGAC GCCGAACCTC TTGTCCTCGG CACCAACCCC GATGGCTTGT CTTGCGAAGG CATCATTAAG AGTCTCGTTT GGGATGAAGG TCAAAACGGA ACCATGGGTG TCAGCGCTGC CGAAGATGGC AAAGTTCGGT ACGTGCATTC TACATTTCTT GACCATTCGC AGTCACAACT AACTTTGATT TCAGATGGTG GGACCTCCGA ACACTGAGCC AAATCGCCTC TCTCGACCTT GGTGAACCCA TCTCTAGCAT GGAACTCGCC CATGGCGGCG GCACCCTCAG CGTCACAGCA GGCAAGAATG TTCACTTCCT CGACATTCTC CGTCAACACC CTCCAGTTAC CATCCCTCTT CCGCACCCCG TCACATCCGC TTCTCTCCAC CCTTATCTAC GTGACAGATT CGTTGCGGGT AGTACGTCTG ACCCTTGGGT CCGAGTTTAC GACCTTGATT CTGGCAAGGA GCGAGAAGTG TACAAGGGTC ATCATGGACC CGTGCTATGT GCAAGCTACA GTCCTGATGG TGAGGTTTAC GCGAGTGGTA GTGAGGATGG CACTATTAGG CTTTGGCAGA CGAACCCTGG AAAAGCTTAT GGGTTGTGGC AAACTTCAGA CTAAGGTCTT ATTGATAGTA ACTTGAGGAT GGATGCAGAG ACAAGAAAAG ATGGAGAACA GCAGAAGACG TAGCCTGTAA ACTGTG
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Protein sequence | MQGYSNGYST LPPSLNPNPV IGQYAPSQQV QLSGQPRLGS VPSSQSNETI KVQPLLCSGH TRPVTHLQFS NVLDDGTYLL ISACKDGNPM LRSWLGDWIG TFIGHKGAVW SSKISLDTSR AVTGSADFTA KIWDTYSGEA LHTFSHNHIV RSVALNPQQT PQYLLTGGHE KKIRLFDLGR PDAEPLVLGT NPDGLSCEGI IKSLVWDEGQ NGTMGVSAAE DGKVRWWDLR TLSQIASLDL GEPISSMELA HGGGTLSVTA GKNVHFLDIL RQHPPVTIPL PHPVTSASLH PYLRDRFVAG STSDPWVRVY DLDSGKEREV YKGHHGPVLC ASYSPDGEVY ASGSEDGTIR LWQTNPGKAY GLWQTSD
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