Gene CNB00160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00160 
Symbol 
ID3255576 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp49241 
End bp50987 
Gene Length1747 bp 
Protein Length247 aa 
Translation table 
GC content49% 
IMG OID638254668 
Productdehydrogenase, putative 
Protein accessionXP_568997 
Protein GI58263174 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.185592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGATTTTATT TCATAATACT AGACCGATGC CCGTCGGTTA CCTTTGCCTG CGGACTTGCA 
GAGTGAGATC ATGGGAATTT CACGATAATG GTTACCGAAC GACGCATGCT CTCTCTGCAG
AGTATATGAT GACTAATCGT AAGTATACTG ATTTTTATTT CATACCAGAC CGATGATTAT
CGATGACAAA TCCAACGTTC ACAAGTCTAA AGATGCTGAC GTGTCGGCTA TAAAGATAGG
TATGCCCGTC GGCTACCAAG GCTGAATATA TACGTTGCGC TTGCTTACCA CCCAGACTCA
GCTCCTCATC CCCAACGTTG TCGATTCAAA TCACAAGTAC GAGTACTGCA CAACCATCCC
GATAGGTCAA GATGGCTTCA ACAGAAATCC CCACCACTAT GCGAGCATGG ACCCAAAATG
AGGTGAACCC TCTCCGTTCT AGAACAGTAT CTCGAACTAA TCCTTTCTTT CTTCCAGTCC
AATTGGATCT CCATCAGCAA TGTCCCGGTC CCTCCAGTGG AAGACAACCA CGTGCTCGTC
AAAGTCCAAT ACGTAGCTCA AGTAAGCTCA GATCCCGTAC GGAAGTCTGC GACTCCCCAA
ACTGACGCTT TTCTCATAAC CCAACCGACT GGAAAAGCGC CCTCTACATA TCCCCTCCAG
GTGTCATCGT TGGCTGCGAC TACGCCGGCA CCGTCATCAA ACTCGGACCC AACCTGAAAA
CTCCCCTCAA AATAGGCGAC AAGATCGCAG GGTGTGTCAA AGGCGGATCG TCAAATGCCG
AAGGGTCGTA CGCTCAGTAC GCGGTGGTGG AGAGCGATAT GTGCTTTGTC GTTCCTGAGG
GGATACCTCT GGAGGAGGCT GCGACGTTTG GGATTGGGTA CATGACTGCC GCTCAGGTGA
GTATGAGAGT GTGTTGAGAG ATGGATGTGA GCTGATACGT ATTTTGATCA GGCTGTCGTA
TACAGTCAGG GCAAAGCACT CCCACCAGGC GATACCAAAG TGTCTGGGAA CTCTTGGTAT
ATCGTCTATG GCGCCTCAGC CTCTGTCGGC TTATTCGCCA CATCCCTCGC CAAAGCTCTA
GGTTACCGTG TCCTTGGCAT CTGTTCTCCC CACTCATTCT CACTTGTGAA ATCGTATGGC
GCTGACGCTA CCATCGATTA CCACAATCAA TCCCAAGCCA TCTCAGAGGC GTTGGATCTG
ACAGACGGAG GGGTGGAGTT TGCGTTGGAT GCGATTTCAG AAGGAGACAG TTTTAGGAAT
ATTGTTAAGA TGATGGGCCA GAGGGGAAAG CAGTTGAATG TTATGCTGCC AGTACCGGAC
GACGTGCGCA AGATTAACCC GGAGCTCAAG ATTGAGTTCA CAGGAGTGAG AACTTTATGG
GGCGCTGTAA GTCCTTGCAT TCTCCCCTTT TACGAATTGA ATATTGACAC ATAAGCTGTA
AACCTATCAG GAGTTCAAAT TTGGTCTTCG TGACTCTGAG AAATCTACCT GGCCTGCCGA
TCCGAATGGC AGAGTGTTCG GTGAGGAATT GTTCCGCAAA ACGCCAGAGC TTGTCGCAAA
GTATGGGATC AAGCCCAACC CTGTCAAGAT TAGAGGTGGA TTCGAAGATA TAGGAGCAGG
GTTGGAAGAT TTGAAGGTGA GTCTTCTAAT AGGGTGGGTC TTACTCTGGG CTGACAGGCG
GTTATAGGAT GGAAAAGTTT CGGGACAGAA GCTGGTGCTC AAAGTCGCAT AAACCTCTCG
CTATCTG
 
Protein sequence
MCFVVPEGIP LEEAATFGIG YMTAAQAVVY SQGKALPPGD TKVSGNSWYI VYGASASVGL 
FATSLAKALG YRVLGICSPH SFSLVKSYGA DATIDYHNQS QAISEALDLT DGGVEFALDA
ISEGDSFRNI VKMMGQRGKQ LNVMLPVPDD VRKINPELKI EFTGVRTLWG AEFKFGLRDS
EKSTWPADPN GRVFGEELFR KTPELVAKYG IKPNPVKIRG GFEDIGAGLE DLKDGKVSGQ
KLVLKVA