Gene CNB00090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00090 
Symbol 
ID3255882 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp24009 
End bp25012 
Gene Length1004 bp 
Protein Length214 aa 
Translation table 
GC content50% 
IMG OID638254662 
Productprotein-vacuolar targeting-related protein, putative 
Protein accessionXP_568755 
Protein GI58262690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.165922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTC CACACTCGGC CTACGATCCT CGCCGCGTAT TCCGTTTCAA CGTCCCCCAC 
TTTGAAATCG GTCCCAAAGC ACGCTCAGTC GGAACATACC TCTCCGGTGG TCTCGTATGT
CAATCTCTCG TACTCGGCTT GCAATCATTA TCTTTCCCTG ATCTATTGCT AACATGAACT
ACTTTCATTC TGTAATAACA TCATCCTATA TCGACACTTT CTCGATCACA ACGTCTGGTA
AATATTTCTA CGTTGCCATT GGATCAAAAT CCCCGCAGTT CGCACTCTCA TATTTCCTCC
TGTTCGACGC CGCTACCCTC TCATCCCACG CAAAACCCCC TCCAGACGCA CCTTACGATG
TTGTACCAGT ACACATGGCG TTTGTCGACT GGATCCCTGC CATCTGCACT ACCCGTACGT
CCCGGTCCCC TTAATTTTCC TATGCCCCTC CACTGTGTCC CCACTCCATC TTTACCTATC
AAAAGTCCGC AGCTGACAAA AAATTACAGT TGGGTTCATC ATAACCTCCC TCCTCGATAA
ATCTCACCTC ACCTCCGCCT TCTCCTCCGA CCCATGGGCA CATGAAGGTT CCGCTGCCTG
GCGTGCAAGG GTGGTCCTCT TCATCGGGGT AGCCTTGATG GCCGGCGGTC TCGCTGGGAG
TCTTGTACGT CCACTGTCTT CACCTTTATC TTTTTTCTTT CACCTTCTTC TGGCTTCTGA
CAAAGGGCTG ACTGATTGGT TGTTTATGGA TTTGTGAATT ACAGTGTGTC CTCATTCTCA
AATATATTGT CCCCGATTAC ACCGGGTACA CCTATTACGG CGCCGCTAAC GTGGCTACCA
ATGTTGGCAT CATGGTCTCG TACGTCTTTT CCCTCCCCTT CACCGCTGGT CACCCTCCAA
AACCCATAGA GCTGACTTCT GAGTTTGACC GGGAAACTAG AGCCATGATA CTCTGGATCT
CGCAAAGCGG CAGCGACGAG TACGAGTATC AACTCACTGT CTAA
 
Protein sequence
MSIPHSAYDP RRVFRFNVPH FEIGPKARSV GTYLSGGLFA LSYFLLFDAA TLSSHAKPPP 
DAPYDVVPVH MAFVDWIPAI CTTLGFIITS LLDKSHLTSA FSSDPWAHEG SAAWRARVVL
FIGVALMAGG LAGSLCVLIL KYIVPDYTGY TYYGAANVAT NVGIMVSYVF SLPFTAGHPP
KPIELTSEFD RETRAMILWI SQSGSDEYEY QLTV