Gene CNB00050 details

Gene Information

• Locus tag: CNB00050
• ID: 3255846
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: -
• Start bp: 8921
• End bp: 15487
• Gene Length: 6567 bp
• Protein Length: 1955 aa
• GC content: 52%
• IMG OID: 638254658
• Product: conserved hypothetical protein
• Protein accession: XP_568751
• Protein GI: 58262682
• COG category: [R] General function prediction only
• COG ID: [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0248021
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGACC TCACGCCATT GCCTACGACG TTTGATCCGG ATAACGATGA TTTTGATGTG 
GAGGATCGCA GAGGTTTAGG GCATGGAGGT GGAGAGGTGG ATGAGGATGG GGAGGGTGAT 
CTTTTGATTG TGCATGGAGA GGAAGAGGAG GAGGAGCAGG AGGAGGGGAA TGAAGGGGAA 
GGGGAAGGGG AGGGAGAGGA CCAGACGAAC TTGATGGAAT ATATTGCGTC GTTGCAACAG 
ATTGGCGAGC ACGATAATGA CGGTAACCAG GATCAAGATC AAGATCAAGA TCACGATACG 
GAGACCGGCG ATAATACCCA TGAGCACGGG CACGACGCGG AAGTCGAACT TGGCCAAGAG 
ATGGAGGAGG AGTCGACAGG ACAGGTGGTG GATACAGAGC TTGGTGAAGC GGATCGAAAT 
CGTGATTCGC CTCCAGATCC GAATCCGGAT CCGAATCCGG ATCCCATCAC AGTACCGAGC 
TACGCCCGAC TCCAAAGTGA ACAGCAAGGA CAAGAGTCAA ATGTGATTAG CGGCCCGATG 
GAGGTGGAGA TGGAAGAGGA AGAGCTGGGA GAGAGCATCG AAGTTGATCC AGGGCAAGAA 
CCCGGAGAGC GTGAGTCGGT TCTTTTTTTT CTCCCATCGA TTCCAGTTGG TACACTAACG 
ATCACATAGT TCATGAACCC GAACCCGAAC CCGAACCCGA ACCTGAAATC CAACGTGAAG 
CATCGTCCCC CCTTTCAGAC CTCCCGGATT TACCTGACGA ACTCGAATTC TCCCCTCCCC 
CTTCTCCCGG ACCTTTTGCG CCGAGTCGGA ATGGTCAACG CCATCGCCAA CCAAGTAGTA 
ACAGCAATAA TTCGAACATG GGCACGGGCA TGGATATGGA GGTTGATCGA GATTCCTCGC 
TCACACCGCT ATACGACGAT TATGACCACG AGGGAGGAGG AAAGGATGGT GTTGGTTTAC 
CACGTCCACG TTTCCGCGCG GAATCCTCAG CTGCGGGCGC GAGACGATCC GCCTCCATGT 
CACATGCGAA TGCGACTAAA CGGGGTCGAA ATACTACCCG AAACAGGGAT AGCAGGGGCA 
GGGAAAAGCA AGGAAGAAGA AGCAGTTTAT CATTTTCATC TTCCCCGCCG CTGGAAAGTA 
TCGAGGTCGC GCCTGATATC GCGCCGGGTA CGGCGGGTAC GCTCGGGGCT GGGCGGAAGA 
AGAGGCAGAG AGAACGGGCA AGCAAGGGAA AATTACCTTT ACGCCATGGG CATGAGCGTG 
GAGATGGGCT TTCTGACGGG GAAGGGGATA ATGAATTTGA GCTTGTTCCA AAGTCTGCCA 
AACGGTCAAA ATCCGCCCAT CCGTTCCCCG CATCCCACGC GGCTTCTCAC GCCGCCTCCG 
CCTCCCATCC GCCACACCAC CCTTCCCGCA AACCCCTCGA CCCAATCTCC ACCGGCCTCA 
AACTCCCCGG GCCCCGTGCC CTCCCGCCCT CCCGCCCCCG CGCGCTCAAC GATCAATCCA 
TCAAAAAGTT TTTGGTGGGC AAAACGGAAG AAGTGCAGTT GGGCATCTGT CTGAGGGAGA 
GGTATAAGAA GTGGGGAAAG TGTACGCAGT GTGTGAGTAA GCTAGGGGGA GATTGTTGTA 
GGTTTAGAGA TTATAGGGTT TTTCCGTGAG TATCTTACCC CGTGTCCTCC CTCCCTTCTC 
CGTTAACAGC TAACCCGCCG GCTCATGCGA ACAGGATCAA TCCCAAAACA ACAGAAATCA 
CAGGCCCAGG GTATTTTAAA TCTACCACCT GGCCCGAACC GCTTACCCCA CTCCCAACAA 
AGTTTACGTC CCCGCTCGAT GGGGACAAGG TGGAGGAGAT ACAGAGGACG GTGGCGGGGG 
TGTTGTTGCC GCTGATAACG GGCGAAGCGA GGCATTGTTT TTGGCCGTTT CATCTGCAGG 
GGCGGGGTAA ACGAGATGGA GAGGGGGAAG AAGTTTCCGA TCCCGCCCAT TCGACACACA 
GGGCGAGGAA TCCCATCACC CTCCACCGCG GTGTCGACAC CGCCCTCCAT CGCTCCGTCT 
GCGATTTCTG CTCCTCCACG ATTTTTGGCG GGTACTATTT CTGTAAGAAG TGTGGGAGGG 
ATTACTGTTT GCAGTGCGAG CGGTATTTCC CGGAGAGTAT GGAGGCCGTA GGGGAGAGTC 
CGTGGGAGCT GACGGATGCG GCGAGGCCGA GGTTGTTAAA GTGTATAAAG CAGCCGTGGG 
AAGAGATGAT GAGCGGAGGC GGAGGAGAAA TGGGAGGTGA TTCGACTGGG AACGGCAATG 
GCAACGGCAG CACGAGAACG AACACCACCA ACGCAAACAC CGACGGGGGC AGCAACACGA 
ACAAAAATGG AAGGAAAAGA GAAAAGGCGA TTGCTTGGCA TGTGCGGAGT GATTTGCAGC 
CCGTTTCGAG ATTTACGAAA GAGGAAATTG AGGGACATTG GCTGAGTCTT GCGGAATTTG 
TCATTGGGCA TGGGTATGGT CCGGACGCTA GTTCTGGCTC TGGCTCTGGG TTTGACTTTC 
TCTTTGGTGC TGATGATGGG GATGAACCCG AAGGAGAGAA GAAAAAGGAG GAATGGAGGC 
TCCAGTGGGA ACGGATGTTA AGATTGATGG GATTGCAAAT GGATGAAGAG GTGAAGAGCG 
TTTTGGAACA ATGGAGCAAG AATGCTCGTG TTGTCAGGGA GAAGGAAAGT GGGTCTGTGA 
CGCACTTGGG TCCCGGCGCC AACGTCGAAT CTAATCTCGA TACCGATACG AATTCTCACC 
CCGTCAATCA GCCCGAAAGC AGTTCGAATA ACCCCATCGA CTCCCAAGCT CCCATCGATA 
AAACTTCAAC ATCCGTTCGC CGATCAGCCG CCATGACCAC AAAGAACGAG AACGACAACA 
AGTTGGAACC TGAAATGGAC GAGGTTGAAG AGTTGGAGAC GGGGGAACCG AAGAGTGCGA 
GCGAAATGTT GAAGGGTATG ATGGATAAGG AGAATGGAGA GGAGACATCG GCGGCTCACA 
CAGGTCCTGC GGCCTCTCTC AATTCTGTCG CTTCTGCTCC TGCGGCCGTA CGGTCATCGA 
CGCAAGTCAC CAAAGTCGAA ATCCCCGTCG CCGCAAATGC TTCTCCCACC GTCTCTTCTA 
GCAGCTCTCC TCAAGCCAAT CCTCCTTTCG AGAAATCTGG CCTACCATCT GCATCCCCAC 
TAAGATCCGT TCCCACCTCC GGCAACTTTA GGACCGGTTC GAATCCCATG CCAGATCAGC 
AGCAAGACCT TGAGAAGATT GCATTCAGCT ACACCAAACA TACCCACCCC AATCCACCTT 
CCGACCCGGC CAGTCTTTCG GACTATTCTC TACCGTTCAT CTACCTCCCT TCACCAGAAG 
GTTTGGATAA CAAGGCGTTC GATGAGCTGT GGAGTAAAGG GGAGCCGATC GTTGTAGGTG 
GTGTGAATGT CTATGTTGGT GGTGGTGGTG GTAGACGACG ACGAGAAGAA GGGGAGAAGA 
TGGGGAAGGA AGGGGAGGAA TGGGGACCCG AGAAGTTTAT AGAAAGGTTC GGGGAAGAAC 
AGTGTTCGGT GGTGGATTGT CAGAGTGACA CGCCGTTGGT TTCCACTGTT GGGGCCTTCT 
TCGCTGCATT TGGGGAAAGT GTAGGCAAGC CATGGGAGAG GGAAGGGGAG GATGGAAAGA 
GGAAGGAAAA GAAACGGCAG GGGATTTTGA AACTGAAGGT GAGTTTTTTT TTTTTTTCGA 
TTGGTTGTCG AATTGGTGAA GAATAACGCG CTAAAAAGAG ATATCTTTCA TTAGGACTGG 
CCTCCAGGTG ATGAGTTTGT GGATACACAC CCAGAGTTGT ATCATGACTT TTGTGCGGCT 
TTGCCTGTAC CGGACTATAC AAGGAGAGAT GGAGTGTTGA ACCTATATTC ACATGTAAGT 
CTTGATGGCT TGTGATAATC GCGTCGCTGA TAGGAAAACG GTTCACATCT TCTCGCCTTA 
ATTCGACCTT ATCCCTTCGG CCCTCCACTT GCTATCGCGC TCACGCCTTG TCCCCTCTAC 
AGTTCCCTCC GGGTCCGACG AGGCCTGATA TCGGACCAAA GATGTATGCT GCCTTTGCTG 
CACTTGAGAC GCCCGGCGGA TTTGGCTCAA CGAGATTACA TATGGACGTC GCGGATGCTA 
TTAACATCAT GCTACATGCT TCCCCCATTC CTGACGACTC GTCCTCATTA GAAGCTCCCA 
TATCCTCTGC AACTTGTTCG ACATCACCTT CTTCCTCGCC AGAAATCACT TTAGGAACCG 
ACTCAAAGAT ACCATCTAGA CCTGGCTGCG CTGTATGGGA CATCTACCCT GCGCAAGATG 
CCGACAAGAT CAGAGAGTTT CTCAAAGAAA AATTTGACAA GACTCATAAC TTTGTGGACC 
CCATTCACTC GCAAATGTTT TATCTCGATG CGAAATCGAG AAAAGAGCTG TGGGAACGTA 
AAAGAGTTGT CAGCTGGAGA GTCTATCAAT ATCCTGTGAG TGTTATTGCT TTTGTGATGC 
ACGATATGGT TTCTGATAAC GTGTATAGGG CCAAGCAGTT TTTATTCCTG CAGGATGTGC 
GCATCAAGTT TGTAATCTTT CCGATTGTAT TAAGATGGCT CTCGACTTTG TTAGCCCTCG 
TAAGTCTCCT ACACTATCGC TACCACTGTT GCATGCCAAA CTCATGTACA ACTATTTGTT 
TCATAGACAA TGTTCCAAGG TGTCAGCAAC TTACCAAGGA TTTCCGCAGA GAGAATTATT 
TGAAAGCATG GAAAGAGGAT GTACTGCAAT TGTATAACGT CCTCTGGTAC GTTTTTTTCT 
TCTTGTTTTT ATCTCCGTTC CTATCAATTG TGGCTGACAT TATTATCGCA GGTACGCTTG 
GCTCTCAGCC CGTGAAACTA TCGCCCGGAG AGAAAAGGAA GTGGCCGCTG CAGAAGCTCG 
ACAGAAGCAG CTTCAATCTT TCCAATTGGA CGACAGTAAC TCTCCACTAT TCCAATCGAA 
GCATCCTACA TCTTCCCCCC TCTGCTCCGC TACGCCTACT ATCACATCGA CTCTTGATCT 
AGATGCTTCG TCAAGAATGG GGTACGACCG TTTGAACATG GGTATAGGAC TTGGCGAGCG 
AGGTATGGGT ATGGGCCTGG GAAGGGTTGG TATGGGCAGT TGGGGAAACG TTAGTTCAGT 
GAGGGACGAG CCGCCGAGAG GTGGACCTTT GCTGTTAATG TTGAATGATG AATCTGAGAA 
GGTCTCAAGA GGTCAACTTA CGGAAGGTGA GAAGTCAAGT GAACCTGTTA GGGGAAAGGG 
GGAGGATCAC GAGAAGTCAG ACCAAGGCAA ACAATTGTCC AGCGATCCGG TCTCATTTGC 
CAGTTCTCTC TCCAACTCTT ATTCACTCCA ACTCGCCAAG TCTCTCTTCA CTCTCTCCCT 
CCAACGCGAC GAAACCAATC CTTCGGAATT ATTTGTGCCT TCTGCCGCCG CCATGAACCA 
CCGACCCCGT GGTCCGTCCT TACCCGATTC ACACTCTTCC ATTGCCCATC CGCGAACTTC 
ATCTCGTGCG CCCTCAACGC ATACCATGGA CAATCGATCC TCGCAAACCT CCGCATCCGT 
CCGCACAAAG GATATCAAGG AGAAAGAGAA TAAATTTACG CCTCCAAAGA AGCTCAAGAA 
CCCCGCCCGT CCGCTTCGTA CGTCAACGCT TATCAAGCTT GGAGCAAAAC GAATGGATGA 
GATCCTTGAA CTTGCAAGAG GGGATCTGGG AGAGGGTGAG AGTTTGAGCA ATGCACTTGG 
AGGCCTTGGG AACTTTGCGG AACTTGGTAC TATGGAGTCA CATGGTGGGA TGCAAGGTTG 
GGCAGGGTTG AGGGCAATGT CGGAGAGCGT GAGAAGTCGA GAAGATGGGG ATAGAGAAGG 
AAGTCCATTG GTATCCATCA ACGATGTCCA CAATTCCAAC TCTAGCCCCA ACGCCGAGAC 
CGATACCTCC ACGCCACCTG ACGATGCCAT CGACCGTACG GACGCTGAAG CCGCTGCTGA 
TATCGCCGCC GAGATACTCT CCATGGATAT TGACCATCAA GAAGACGAGA CAAACATTGA 
AGATGATGGG GATCTTGAAG GCTTGAGGCG GATTGTCGAG CGAGGAATAT TGGAGCAGGA 
ACAAGGGCAA GAGCAAGGGC AGGAGCAAGA ACGGGAACAA GAGCGGGAGC AGGAGGATGA 
CGAGAGGGAT AACGAGCTTG GTGAGGAAGG GAGGGAGGCG ATAGCGTCTA TTCAGAGGCT 
ACAGGCCGTA GAGGAGGCAG AGGAGGAAGA GAGGGAAAGA GAGAATCTTG CGAAGGAGGA 
AGAACGTGAA AGGGAGATGG GAAGACCCGA GGGCGTTGTT ATCAATGATG ATAAAGAGGA 
AGGCGAAGGG GAAGAGGAGG AAGATGAACA GGCAGATAGA GAAAAAGCGA GACAACGGGA 
AGAGGAAGAA GAAGAAGAGA TTGAAGGTGT AGATGAAGAT GCCGAAGGCG AGGAATTTGA 
AGAGGTTTCA AAGATGAGTG TAGATTTTGG CATGTTTATA TAGTTGGGCA TAATTAACTG 
CTGTAGTATA ATCTGTGTAT ATATAAC 

 

Protein sequence

MDDLTPLPTT FDPDNDDFDV EDRRGLGHGG GEVDEDGEGD LLIVHGEEEE EEQEEGNEGE 
GEGEGEDQTN LMEYIASLQQ IGEHDNDGNQ DQDQDQDHDT ETGDNTHEHG HDAEVELGQE 
MEEESTGQVV DTELGEADRN RDSPPDPNPD PNPDPITVPS YARLQSEQQG QESNVISGPM 
EVEMEEEELG ESIEVDPGQE PGELHEPEPE PEPEPEIQRE ASSPLSDLPD LPDELEFSPP 
PSPGPFAPSR NGQRHRQPSS NSNNSNMGTG MDMEVDRDSS LTPLYDDYDH EGGGKDGVGL 
PRPRFRAESS AAGARRSASM SHANATKRGR NTTRNRDSRG REKQGRRSSL SFSSSPPLES 
IEVAPDIAPG TAGTLGAGRK KRQRERASKG KLPLRHGHER GDGLSDGEGD NEFELVPKSA 
KRSKSAHPFP ASHAASHAAS ASHPPHHPSR KPLDPISTGL KLPGPRALPP SRPRALNDQS 
IKKFLVGKTE EVQLGICLRE RYKKWGKSNP PAHANRINPK TTEITGPGYF KSTTWPEPLT 
PLPTKFTSPL DGDKVEEIQR TVAGVLLPLI TGEARHCFWP FHLQGRGKRD GEGEEVSDPA 
HSTHRARNPI TLHRGVDTAL HRSVCDFCSS TIFGGYYFCK KCGRDYCLQC ERYFPESMEA 
VGESPWELTD AARPRLLKCI KQPWEEMMSG GGGEMGGDST GNGNGNGSTR TNTTNANTDG 
GSNTNKNGRK REKAIAWHVR SDLQPVSRFT KEEIEGHWLS LAEFVIGHGY GPDASSGSGS 
GFDFLFGADD GDEPEGEKKK EEWRLQWERM LRLMGLQMDE EVKSVLEQWS KNARVVREKE 
SGSVTHLGPG ANVESNLDTD TNSHPVNQPE SSSNNPIDSQ APIDKTSTSV RRSAAMTTKN 
ENDNKLEPEM DEVEELETGE PKSASEMLKG MMDKENGEET SAAHTGPAAS LNSVASAPAA 
VRSSTQVTKV EIPVAANASP TVSSSSSPQA NPPFEKSGLP SASPLRSVPT SGNFRTGSNP 
MPDQQQDLEK IAFSYTKHTH PNPPSDPASL SDYSLPFIYL PSPEGLDNKA FDELWSKGEP 
IVVGGVNVYV GGGGGRRRRE EGEKMGKEGE EWGPEKFIER FGEEQCSVVD CQSDTPLVST 
VGAFFAAFGE SVGKPWEREG EDGKRKEKKR QGILKLKDWP PGDEFVDTHP ELYHDFCAAL 
PVPDYTRRDG VLNLYSHFPP GPTRPDIGPK MYAAFAALET PGGFGSTRLH MDVADAINIM 
LHASPIPDDS PGCAVWDIYP AQDADKIREF LKEKFDKTHN FVDPIHSQMF YLDAKSRKEL 
WERKRVVSWR VYQYPGQAVF IPAGCAHQVC NLSDCIKMAL DFVSPHNVPR CQQLTKDFRR 
ENYLKAWKED VLQLYNVLWY AWLSARETIA RREKEVAAAE ARQKQLQSFQ LDDSNSPLFQ 
SKHPTSSPLC SATPTITSTL DLDASSRMGY DRLNMGIGLG ERGMGMGLGR VGMGSWGNVS 
SVRDEPPRGG PLLLMLNDES EKVSRGQLTE GEKSSEPVRG KGEDHEKSDQ GKQLSSDPVS 
FASSLSNSYS LQLAKSLFTL SLQRDETNPS ELFVPSAAAM NHRPRGPSLP DSHSSIAHPR 
TSSRAPSTHT MDNRSSQTSA SVRTKDIKEK ENKFTPPKKL KNPARPLRTS TLIKLGAKRM 
DEILELARGD LGEGESLSNA LGGLGNFAEL GTMESHGGMQ GWAGLRAMSE SVRSREDGDR 
EGSPLVSIND VHNSNSSPNA ETDTSTPPDD AIDRTDAEAA ADIAAEILSM DIDHQEDETN 
IEDDGDLEGL RRIVERGILE QEQGQEQGQE QEREQEREQE DDERDNELGE EGREAIASIQ 
RLQAVEEAEE EERERENLAK EEEREREMGR PEGVVINDDK EEGEGEEEED EQADREKARQ 
REEEEEEEIE GVDEDAEGEE FEEVSKMSVD FGMFI