| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNN02280 |
|---|
| Symbol | |
|---|
| ID | 3255389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006683 |
|---|
| Strand | - |
|---|
| Start bp | 703801 |
|---|
| End bp | 706170 |
|---|
| Gene Length | 2370 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638254638 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_568716 |
|---|
| Protein GI | 58262612 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.104271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGTAACTTCA AACCGGTCCT GAGCTAGCGC AATGACTATA CGACTAAGGA TGCCCAAGTT
GGTGGTGGAA GGGTCAAAAG GCAGAGAGGC TGCGCTTGAA AATGATGATC TTCTGCCCAT
TCCTTTGGAG AGAAGGTGAG TTGGAACTAC CTCTTCTAAG GTTGGTCGCT AATAAGCCCT
GAAGAACTTG GAATTTCACC ACTTTCTGTT AGTCCATTAC TTCGTTTTCG TTTCAGTCTA
TTCACACTCG TTCAGCAATC TTTTGGTTCT CGGCTGTTGG GACGGTTGCA AACTGGCTGA
GCGGAGGCAC ATTCTTGACC GTAAGTCACC CATTGGGGGA CTATGTGGAT CGGAGTTTGA
CGAAGTCAAT CAGTACGGCA TCACTGTCTG GGATGGTATC CTTTGCAACT TCTTCGGATA
TCTCCTCATC TCCTTCTTCA TGGTCATCAA TGGTCGTGCT GGTTCAGTCT ATCACGTTAG
TGCATCCTCT TATTATTTCA TTATCAACCT GTTGACAGTC CCACAGATCG GTTTCCCCGT
TTATTGTCGA TCTTCATTCG GTGTCTTTGG TTCCTTTTGG CCTGTGTTCA ATCGTGCTCT
CTCAGCATGT GTCTGGAACG GCGTCAACAC CGTCACTGGT GGTCAATGTG TCTACATCTT
CCTCCACTCC ATCTTTCCCT CCATCGCTCA TCTCCCTAAT CACATGCCCT CTACTTCGGG
TATGACCTCT GCCCAGATGT GCGGCTTCTT TCTTTTCTGG TTCTTCACCG GCTGCGCGCT
CTTTCTCTCC GTCCCCAAAT GGAAGTTTCT TATCCATGCC AAGCTCGTCG CCTACTTCCT
CAGCTGCGTG GGTATGCTCG CTCTCGCGCT CACCACCAGC AAAGGTGTAG GAAACACCTT
GACAGCTGGA CCTACAGTTC ATGGGAGTGA GAGAGCATGG TTGATTGTGA GGTTCACTTT
GCTCTCTGCG GCAGGGTGCT CAACGTTTGC GAGTAATGCG AGTGACTGGC AGCGAAATGC
TACCCACAGG AGGGATCCCA TCTTCGGTCA GATCTTTGGC TTCCCAATGT CCAATGTATG
TCGCTTTCTT CTCACTCCTT CCCCTGCCCC TTTTCTTTTT CGACTCCCGC TAAACCTTGA
TTCCAGTTTA TCACCACCCT CTGCGGTCTC ATCGTCGCCG CTTCCTCCGA AAAAGCATAC
GGCACCCTCA TCTGGAATCC ACTCACCTAC CTCGACCGTA TTCTGACAGA AAATTACGAT
GCCAAAACCC GAGCGGGCAC TGCCATCATC TCTATCGGTT TTGCTTATTC TGCACTCTTT
TCTTGTGTGT TTGAGAATGT GTTGCCGGCG GGTAACGATA TCAGCTCTTT GGCACCCAAA
TATTTGTCGA TGAAGAGGGC GTTTGCGATT TGTATGATTA TAACTGTGGT GTAAGTTTTT
TTCTGTTTAT AATATGATCC GGTCAGATCG GCGTAAAGCT TACTCTTTCT CAAGTATCTG
CCCATGGTAT CTCCTTGGGT CGGCGGGTAT CTTCGTCACA TTCATCTCAT CATACCAGAT
CTTCCTCTTC AGTATCGTTG GTGTTCTTCT CGTTGATTAC TACATCATCT CGAAGGGTCG
ACTTGACCTT ACTTGGATGT ACACTGCAGA CAAGCATGGT CCTTACTGTA TGTTACTCTC
ATTTGAATAA AGGCCGCCCG AGGCTTAATA AAAGGTGTAG ACTACACTTT CGGTATCAAC
TGGAGGGCAA TACTTGCTTA CTGTATCGGC GCTGGCGTCA ATTTTGCTGG CTGTAAATCT
TTCATTTCGT CCAAAAACAA CACACCTGAA TCTAACTGAC TTGAATTCCA GTCCTCAACA
ACATGGGTGT AAAAGGTTTC TCCACCGGTG TCATCCGTTC ATTTTACTTT GCATTCATAA
CCACCGGCTG CGCCTCTGGG CTCTCTTACT ACCTTCTCGC TAGATTCTTC CCTCAAGAGA
ACTACAAGCG TTTCAAAGGG CTTAAGTTCC GTGAATGGAC AGAAGAAGAG GTCGAGCTTT
ATGTACAGGG TGCACCGTGG AGGATTTTGG GGACAGCCTC ACCAGAAGTG GGGGTGGATG
GAGTGCCTAT CATGCCTGGA AATAGGGGAA GTTTGGAAGA TGTAGAAGAT ATGGATGAGA
AGAAGGTCGA TACCACTCAA ACCACTATTC TCGAGGTGTA AGCATCCTGC GCTGGTGGTC
TCCAAAAAGC GGACGGTAAT GTCCAACGGT TTTATTTGAA TGATTCTTAT AGAGGTTTAT
CCGAAGTTGT GTTATAGGCC TTCATAGCCA TTTGGTTGTC AATGTGCGTT GTCTTGGAGT
TGGGATTAGT GAATTGTCGA TCTACGGAGT
|
|---|
| Protein sequence | MTIRLRMPKL VVEGSKGREA ALENDDLLPI PLERRTWNFT TFSIFWFSAV GTVANWLSGG
TFLTYGITVW DGILCNFFGY LLISFFMVIN GRAGSVYHIG FPVYCRSSFG VFGSFWPVFN
RALSACVWNG VNTVTGGQCV YIFLHSIFPS IAHLPNHMPS TSGMTSAQMC GFFLFWFFTG
CALFLSVPKW KFLIHAKLVA YFLSCVGMLA LALTTSKGVG NTLTAGPTVH GSERAWLIVR
FTLLSAAGCS TFASNASDWQ RNATHRRDPI FGQIFGFPMS NFITTLCGLI VAASSEKAYG
TLIWNPLTYL DRILTENYDA KTRAGTAIIS IGFAYSALFS CVFENVLPAG NDISSLAPKY
LSMKRAFAIC MIITVVICPW YLLGSAGIFV TFISSYQIFL FSIVGVLLVD YYIISKGRLD
LTWMYTADKH GPYYYTFGIN WRAILAYCIG AGVNFAGFLN NMGVKGFSTG VIRSFYFAFI
TTGCASGLSY YLLARFFPQE NYKRFKGLKF REWTEEEVEL YVQGAPWRIL GTASPEVGVD
GVPIMPGNRG SLEDVEDMDE KKVDTTQTTI LEV
|
|---|
| |