Gene CNN01870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN01870 
Symbol 
ID3255307 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp539465 
End bp541238 
Gene Length1774 bp 
Protein Length529 aa 
Translation table 
GC content49% 
IMG OID638254605 
Productconserved hypothetical protein 
Protein accessionXP_568663 
Protein GI58262506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTAGTTTCA AAAGCTTCTG AATAGCTCCA GCATAAATCT ATCGCAATCG CTGATGGTCT 
CTTCTGAGAT TTCGAAGATC ATAACTTCTC TTTATAACGA TCTCACTGAT GAATCTCTCC
CAGAGACCCA AGGTGCGTTC TCTCGTGAAA TGTGGTCGTC CAAACCGGCT GAAATGAGCT
TTGCTTCTCT GCCTTAACAG ACCTGATCGC ATGTGGACCC GCTGCTTTTT ACAGCCTCGC
TCGCTCCTGC CGAGTTCTCC TTTTACATGC CCAACACTCC TCTTGCCAAT CCGAGAAATT
TAATGACCAA CCTCAAGATG AACTTCCTTC ATCTTCATCC CTGGCCGAAA CCAACCTGAG
TCTTCAGAGT TTTCTGACCT TGGCCCAACA ACACATCAAG TCAGTTCCAT TTAATCTCGT
CCCACGGCAT TGGCTACGCC TCTACACCGA CGTCTCTCTC CTAGCTAGCT CGTACGACGT
AATGATTGGT CCTGGCGGCC GGAGAGATGG TGTTGAAAAG AGGTTATTTT GGGAGGGAGT
GGTGAGGCGC TTGGATATGG CGATTATAGT AGCTGGGGCT GTGGGAGATA AGCGGCAAGG
CTGGGTGGCG AGCTTGATTA AAGAAGCACA AAAGGTTGGA TTGGGATCGC AATACTCGTC
ATCTCCGAAC CAAGACGCGG TGAGAGAAGC AAAACGCCCT CGAAAAGAGT TAAGCCCTCC
GTTTGAATCT CTCTCTGTAC CTTTCCTCGA CGCACCTAAT CCTGTGCAAG TCTTCGATAC
CCCGCCCTCC TTAACATCAT ACATTCGCTC CTACCGATGC CACCCATTCA TAATCCGCAA
CTACTTCAAC AACCCCGATG TTGGCTGTTA CTGGCCTTCC ACAACACGCT GGGCATCGAT
GGATTACTTA TTGGAACGAG CCGGGAAGGG GCGGGTGGTT CCTGTGGAGA TCGGAGGCGC
GTATGATGAT TCTGATTGGG GGCAACAGAT CCTTCCGCTG GAGATGTTTT TACGACGAGC
AGGATATCGA TCTGCACATG ACGACAACAT TGGCGACGAT GATGACAATG ACCATGCCAA
TGGTAATAGA GAAAGCAGCT CACCTCTATA TCTCGCCCAA TACAACCTCT TTAGTCAGTT
TCCAGATCTC GCGCAGGATA TTTCATATCC CGATTACGTC TGGTCGGACC CGCCAGCACC
TGAGGGATAC CCCACTTACC AACGCCCTCA AACGGACGAT GGAGTGATTG TAAATGTATG
GGTGGGCAGC GGGAGTAGTG AAATTACCAG TCCGGCACAT ACTGTAGGTG ACAGTCTTGT
ATTGTATGCT TTTTTTTTGT TGTGTTCTGA TCCAATTGTT TTTAGGATCC GTTCTATAAT
TGCTATGCTC AAGTGTTAGG ACATAAAAAG GTCTGGCTCG CGCCACCATC TTGTGGGGCG
CATATGTACG CCTATGGATC ACACGCTCCT AGCAACAGCA ATGGAAATCA TTCTAATGAG
CCTGGAGGCG ATGATAATGA CAACGACAGC GGTGAGCTGG TGGACAACTA CATGATGAAT
ACTTCCAAAG TTCCCATTTT AAGACCCATC AAAAGCCCAT CCACCCTCGC CACCCTCGAG
AAAGACTTCC CAGAGTTTTT CAAGTATGTG TATCCGAAGA GTTTAAATGC GGTTTTAAAT
CCTGGAGATT TACTTGTTTT CCCTCCTGGA TGGTGGCATG CGATGAGTGG GGTTGGCAAG
GGGCCTGTTT GGAGTGTGTC AATGTGGTAT TGAA
 
Protein sequence
MVSSEISKII TSLYNDLTDE SLPETQDLIA CGPAAFYSLA RSCRVLLLHA QHSSCQSEKF 
NDQPQDELPS SSSLAETNLS LQSFLTLAQQ HIKSVPFNLV PRHWLRLYTD VSLLASSYDV
MIGPGGRRDG VEKRLFWEGV VRRLDMAIIV AGAVGDKRQG WVASLIKEAQ KVGLGSQYSS
SPNQDAVREA KRPRKELSPP FESLSVPFLD APNPVQVFDT PPSLTSYIRS YRCHPFIIRN
YFNNPDVGCY WPSTTRWASM DYLLERAGKG RVVPVEIGGA YDDSDWGQQI LPLEMFLRRA
GYRSAHDDNI GDDDDNDHAN GNRESSSPLY LAQYNLFSQF PDLAQDISYP DYVWSDPPAP
EGYPTYQRPQ TDDGVIVNVW VGSGSSEITS PAHTDPFYNC YAQVLGHKKV WLAPPSCGAH
MYAYGSHAPS NSNGNHSNEP GGDDNDNDSG ELVDNYMMNT SKVPILRPIK SPSTLATLEK
DFPEFFKYVY PKSLNAVLNP GDLLVFPPGW WHAMSGVGKG PVWSVSMWY