| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNN01810 |
|---|
| Symbol | |
|---|
| ID | 3255364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006683 |
|---|
| Strand | + |
|---|
| Start bp | 519715 |
|---|
| End bp | 522967 |
|---|
| Gene Length | 3253 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638254599 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568686 |
|---|
| Protein GI | 58262552 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTCTTAGAC CGTTTTCGCT CCTCCTTTCC CCTCACCGAT TTGCTTACCT CGCAAACTCG
CAGTGTGTTT TGGCAGTGCG CTTTGAGCTT GTGCTCCACA GCTTCTCTCT TCTCTTGTGC
TCACCCTCTC CTTCCCCCCC CCCTCACTTC CACCTGGCCT TCCTTGCGCT CACGTCTTTT
TTCAGCCCAA ACAGGCAACG CTGCGACTCG TTCCTGCCGC TGCATTGGCT CGCTAACAGG
CTGGCTAGCT GGAAACGCTG CAGTTTGCCA ATACGTTCAA GACGGGAGGG AGAATAGAGA
AACATTACCG CGTTGTCAGG TCAGTACACG TACGTCTTGT TTCTTTGGTT CGTCGTCCCT
TCCCCTTTGA TCGACCTTTT TTTGCCTTTG CGCGTCTCAT TTTCTGCTTG TCCATTGCGG
AAAAACTTGT ATCTTCAGAC AACCTCGCAG ACTTGCGTTC GTCCAAACAC AGTACTGACT
GCTGCACCTA TTCTAGAAGC TTTGAGGAGG TTCTCTGAAA CCCCTCATGT CGGCGATCCC
GGAGCAGCCG GCCGTGGAGG CTCTCAATGA CCAGCTTCAA AGCATACAGC TCGATGGCTC
TCGGCACGCT GCGAATGGTA AACATTCAAA TCGGCCATAC GTTCAACTCC GGCCTCATCC
CGCTCAGCTC CAACCCCCGC CCCCGCCCCA GCCCCAGTCA CAGGCCTACC AGCCGTATGC
ACAAGCATAC ACGCCTTACC CCCAACATTA CCATCAAGCT CCTTACACTA CCTACCTTAC
TTATTCGCCT TACCCAAACC ATCTCGCATG GCGGCCTCTC CCGGGGTCGG AACAGACGTC
GCCTATCGAC CCTACCAACC AACATCATCA TCAGCACCAG CATTATGGTC TATGGGGCAG
TCCGCCGGTG AGCCCGGTGA ATGCACCACC ACCCCAGTTT TTGACAGGGC AGTCACGTAC
GGCCATGTTC GATGATTTCG GAGTTGGAGG GGCTGTCTCG GGGGCTGGTA CGGCGTATTA
CGGCGGCAGA CCGCCGTACG GTAGTCCTCC CTCTGTATGG CAGTCACCCA CGGCGCCGTC
ATCCTTCTTC TATACGCCTT TCCAGCAACA TGCTTCCGGT ATGGGACCGG CCATGCAAGT
TTCGGACTGG TCGACGTTCA AGGCTCACGT CAATTTACCG GGACCATCGA AATCGGGGCC
GATCAGTCCA ACGGATAGTA AAGAGCCAGA GAGAAAGTCG TATCACCCTC AACCGCCTTC
AAAGAGAAGC GATTGGGTCA TGTGGGTCGG TAATGTGTAA GTCCACGTCC CCCCTACAAG
GTTTCCCGGA CAGCACGTGG GTGCTTATGA TATGCCCATC AGCCCCAATA ACACTTCTCA
CGAAGAGCTC TGGCATTTCT TCAACGTGAC GATCCCCATC ACCAACACCG AATCCGACGC
CGAACCATGG CGTGGACCGT CTTCCATCTT TCTCATATCC CGCTCATCCT GCGCATTCGT
CAACCTCTCC TCTCAAACCG ACCTCGAACG CGCCGTCTCC TTTTTTAACG GTAAGCCCCT
CCGACCATGG GACGCCCGTT GCCCCAGGAT GGTCTGCCGC GTGAGACGGA AAGATGATGA
TTTGAGATCC GGCGTGGGAG CCCAGCGCGG GACGGGAATG CATCGACAAT GGGTGAAGAA
GGATAAGGAA AGGGAAAAGG AAAAGGAGGA GGGTAAGACG GGGCAGATGA GTGCAGCCAC
AGTTTCGTCC GGACCGCCTA GCCCGGCTAT CCTGGCGCCA GCACCGGATG GGCCGGGGAG
GAGGAGGGAC TCGATTGTAA GTGAGGAAGA GAAAAAGTTT TCGTCAGGGA GTTATGCGAG
TACAAATTCG AGTTTCTTGA TGAGACATTT CCCGAGAAGA GTTTTCATTT TGAAGAGTCT
CACTACGGTG AGCTTGATAC AGATTACGTC TGATTTTCAA AACTGACTTT TCCCCTCCCA
ATTCAGGCTG AGCTCGAGGA GAGTGTGAGG ACTGGTATGT GGAGAACGCA ACAGCACAAT
GAACCTATAT TGGGCAAGTC ATTGTATTTC TTTCCCAATT TAAGCAACAT GACCTAATCC
GAAGCATAGA CCAAGCATTC AGGACATCCC AATCGGTCTT TCTAATCTTT GGCGCCAACC
GAGCCGGTGA ATTCTTTGGG TACGCACGTA TGATCGAGCC TATCGACAAG GAACAAGCCA
AACACCGCCA ATCCTCAGCT GGCACCGCTT CCCGCCGTTC AACCACCGGT GATTCCGACC
GTTTCTTCCT GCCCCCTTAT CACAGCCGCG TAACCACCAT GTCCCCCGGC GAACTCGCTA
CTCCTCGCGA AGACTCGTAT TTCCACGTTT CCACAGGTCA CCGAAAGACT GATCCGCCGA
AAATGCCAAA TCATGCGGCT CCGAATAGCT CCATGGCGGA GATCCTCGCT ACGGCTGAAG
AGCAGAGAGC GCATACGTTT GATCCCAAGA CGTTACAAAG GGATTATGAA TACCCATCTG
TAACTCTTAC TTTGGCTGAA GCTGAAACGG GTGTTACTTC CTCTTCAGAG AAGAGCAGTC
AGCAAGCCTC GCCTGAACTT GGACCGGCGT CGCAAGAGCC GCAAAAGATG GACGACCAAG
GTATCTTGAG AAAAGATACA TTACCCCCTC CTTCTCCTCC AGAGCAAGAT GTGGAAAAGT
TACAGCAAGC TGAACAGGAA ACTTCAAAGG AGTTGTCCAA CGAAGGATGG GGACATTATT
TCCGTATCGA ATGGATAAGG CATACACCAT TACCTTTTAA TCGTACCCGT CATTTGCGTA
ACCCTTGGAA TGCGGATAGG GAAGTTAAAG TCTCAAGAGA CGGTACAGAA GTTGAACCCT
GTAAGTAACT GAGCTCTTTT TCATCTCGCC CATCTTTCTC ATTTTGATCG CTAATCATGC
ACTTTGTGAT TCCAGCTGTC GGTCTTCAGC TCATGGCCGA ATGGGATAAC GAGTGATATC
GTACCCCACC TTTCCCTACT TCACCTCAAT AGTCATGCGC CTCCATTAGT ATTACCCGAA
CAATTCCTTG AAAACAAAAA CGCATAACAA ACGATTACTT ATATACACGG TACAAGGTCG
TTTATTTTGA CGGACTGCAT TCAATAAACT CATGATAACA TTGACATTGC ATAAACCATT
TATTTCGTTC TCTTTTTTTG CGGCATTATA TGGGTTTTGC ACGCCCCTTG GTTATTTGGA
TATAATACAC GTA
|
|---|
| Protein sequence | MSAIPEQPAV EALNDQLQSI QLDGSRHAAN GKHSNRPYVQ LRPHPAQLQP PPPPQPQSQA
YQPYAQAYTP YPQHYHQAPY TTYLTYSPYP NHLAWRPLPG SEQTSPIDPT NQHHHQHQHY
GLWGSPPVSP VNAPPPQFLT GQSRTAMFDD FGVGGAVSGA GTAYYGGRPP YGSPPSVWQS
PTAPSSFFYT PFQQHASGMG PAMQVSDWST FKAHVNLPGP SKSGPISPTD SKEPERKSYH
PQPPSKRSDW VMWVGNVPNN TSHEELWHFF NVTIPITNTE SDAEPWRGPS SIFLISRSSC
AFVNLSSQTD LERAVSFFNG KPLRPWDARC PRMVCRVRRK DDDLRSGVGA QRGTGMHRQW
VKKDKEREKE KEEGKTGQMS AATVSSGPPS PAILAPAPDG PGRRRDSIVS EEEKKFSSGS
YASTNSSFLM RHFPRRVFIL KSLTTAELEE SVRTGMWRTQ QHNEPILDQA FRTSQSVFLI
FGANRAGEFF GYARMIEPID KEQAKHRQSS AGTASRRSTT GDSDRFFLPP YHSRVTTMSP
GELATPREDS YFHVSTGHRK TDPPKMPNHA APNSSMAEIL ATAEEQRAHT FDPKTLQRDY
EYPSVTLTLA EAETGVTSSS EKSSQQASPE LGPASQEPQK MDDQGILRKD TLPPPSPPEQ
DVEKLQQAEQ ETSKELSNEG WGHYFRIEWI RHTPLPFNRT RHLRNPWNAD REVKVSRDGT
EVEPSVGLQL MAEWDNE
|
|---|
| |