Gene CNN01790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN01790 
Symbol 
ID3255523 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp516226 
End bp517292 
Gene Length1067 bp 
Protein Length277 aa 
Translation table 
GC content55% 
IMG OID638254597 
Productresponse to unfolded-protein protein, putative 
Protein accessionXP_568682 
Protein GI58262544 
COG category[S] Function unknown 
COG ID[COG5081] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0738973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCCC CCTCGGTCAC GCTCACCGTC CCGCCGCACT CCCCCGCCAG GTCACGCTCG 
GTCTCGCAGC CGATCCCCGA AGACGCCGCC CTCGACACCC TCTCCCCCCC CCGCCTCAAA
TCTTCCCGCT CGGCAACCCT CCGCTCCCTC TCCTCCAATT CGGTCGCCCG CGGCCCCGTC
CCCTTCTCAC AAAATCATGC CCACTCAAAT TCCCCCTCCC CGCAGTTTCG CGCAAATAAA
GGCCGCGCAC GTAGCTCGAG CCTGGTGACA GTGACCGAAG TCGGTGGCGA TGATCCGGAT
AACGTGGTCG ACAGGCTCGG CGCCGGCAAC AATGAGAATG CGGCCTGGGT GAATGCTCCT
GGTGAGTTTC TTACGCGGAA GACGAAACGT GTCCGTGGGA CGAGCTCATT GTGATTCGCC
TCAAAAGGTG CTTGGTTGAT ACATCCTGTG CTCATCTTTT GTGGCAAGCT GTTGATCGAT
GCCATACCGG GCATGACACA AGATGTCAGC TGGACGATTG TCAATCTCAG CTATATCACC
GTGGGTCGCT GCCTTTCTAG ACGCGTTGCG ACGTCGTTTG CTTACAGAAC GCCAGTTCTC
CTTTATCATG TTCCATCACG TTACCGGACT TCCCTTTGAA TCGACCATGA CCACTTCTGG
AGCTTACGAC GATCTTACAC TGTGGGAACA AATCGATTCA GGCGCCCAAT ATACACCGGC
CAAAAAGTGG CTGACGAGTG TGCCTATAGG ATTGTGAGTC GGTGCCACAG AAGGACTTTT
TGTTTGCTGA CTTTTTGCAG ATTCCTTATA TCAACGCATT ATACTCGCTA CGACTATGTC
CTCTTTGCTC TAAACTTTGC CGCTTTGATC TTTGTCCTCT TTCCCAAATT GCCTGTCGTA
CGTCAACGTT TGCTGTTCTC TCGCCGAGAT GGGCCTTGCT GATATTGATT GTCAAACAAT
AGCTCCATCG ATTGAGATTC CATTTTGCGG TTAACAGCGA CGTCCCCCAG ACACCCGTAC
AATCTCGCCC TCCCTCTCCC ACTCGCAGAA CAGCTGGAGG TCGTTGA
 
Protein sequence
MSPPSVTLTV PPHSPARSRS VSQPIPEDAA LDTLSPPRLK SSRSATLRSL SSNSVARGPV 
PFSQNHAHSN SPSPQFRANK GRARSSSLVT VTEVGGDDPD NVVDRLGAGN NENAAWVNAP
GAWLIHPVLI FCGKLLIDAI PGMTQDVSWT IVNLSYITFS FIMFHHVTGL PFESTMTTSG
AYDDLTLWEQ IDSGAQYTPA KKWLTSVPIG LFLISTHYTR YDYVLFALNF AALIFVLFPK
LPVLHRLRFH FAVNSDVPQT PVQSRPPSPT RRTAGGR