Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNN01790 |
Symbol | |
ID | 3255523 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006683 |
Strand | - |
Start bp | 516226 |
End bp | 517292 |
Gene Length | 1067 bp |
Protein Length | 277 aa |
Translation table | |
GC content | 55% |
IMG OID | 638254597 |
Product | response to unfolded-protein protein, putative |
Protein accession | XP_568682 |
Protein GI | 58262544 |
COG category | [S] Function unknown |
COG ID | [COG5081] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0738973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCCC CCTCGGTCAC GCTCACCGTC CCGCCGCACT CCCCCGCCAG GTCACGCTCG GTCTCGCAGC CGATCCCCGA AGACGCCGCC CTCGACACCC TCTCCCCCCC CCGCCTCAAA TCTTCCCGCT CGGCAACCCT CCGCTCCCTC TCCTCCAATT CGGTCGCCCG CGGCCCCGTC CCCTTCTCAC AAAATCATGC CCACTCAAAT TCCCCCTCCC CGCAGTTTCG CGCAAATAAA GGCCGCGCAC GTAGCTCGAG CCTGGTGACA GTGACCGAAG TCGGTGGCGA TGATCCGGAT AACGTGGTCG ACAGGCTCGG CGCCGGCAAC AATGAGAATG CGGCCTGGGT GAATGCTCCT GGTGAGTTTC TTACGCGGAA GACGAAACGT GTCCGTGGGA CGAGCTCATT GTGATTCGCC TCAAAAGGTG CTTGGTTGAT ACATCCTGTG CTCATCTTTT GTGGCAAGCT GTTGATCGAT GCCATACCGG GCATGACACA AGATGTCAGC TGGACGATTG TCAATCTCAG CTATATCACC GTGGGTCGCT GCCTTTCTAG ACGCGTTGCG ACGTCGTTTG CTTACAGAAC GCCAGTTCTC CTTTATCATG TTCCATCACG TTACCGGACT TCCCTTTGAA TCGACCATGA CCACTTCTGG AGCTTACGAC GATCTTACAC TGTGGGAACA AATCGATTCA GGCGCCCAAT ATACACCGGC CAAAAAGTGG CTGACGAGTG TGCCTATAGG ATTGTGAGTC GGTGCCACAG AAGGACTTTT TGTTTGCTGA CTTTTTGCAG ATTCCTTATA TCAACGCATT ATACTCGCTA CGACTATGTC CTCTTTGCTC TAAACTTTGC CGCTTTGATC TTTGTCCTCT TTCCCAAATT GCCTGTCGTA CGTCAACGTT TGCTGTTCTC TCGCCGAGAT GGGCCTTGCT GATATTGATT GTCAAACAAT AGCTCCATCG ATTGAGATTC CATTTTGCGG TTAACAGCGA CGTCCCCCAG ACACCCGTAC AATCTCGCCC TCCCTCTCCC ACTCGCAGAA CAGCTGGAGG TCGTTGA
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Protein sequence | MSPPSVTLTV PPHSPARSRS VSQPIPEDAA LDTLSPPRLK SSRSATLRSL SSNSVARGPV PFSQNHAHSN SPSPQFRANK GRARSSSLVT VTEVGGDDPD NVVDRLGAGN NENAAWVNAP GAWLIHPVLI FCGKLLIDAI PGMTQDVSWT IVNLSYITFS FIMFHHVTGL PFESTMTTSG AYDDLTLWEQ IDSGAQYTPA KKWLTSVPIG LFLISTHYTR YDYVLFALNF AALIFVLFPK LPVLHRLRFH FAVNSDVPQT PVQSRPPSPT RRTAGGR
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