Gene CNN01770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN01770 
Symbol 
ID3255471 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand- 
Start bp511855 
End bp513018 
Gene Length1164 bp 
Protein Length178 aa 
Translation table 
GC content46% 
IMG OID638254595 
Productconserved hypothetical protein 
Protein accessionXP_568678 
Protein GI58262536 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.15988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCAAACGTC TAATATCTAA AGATCATCAC ACTTTCTAAT AGCGCCATCT AACAACCAAC 
ATGTCTCCTC TGCCTGAAAT TCTTTTCGAC GTCGCTCGTA ACCCAATCTT GGCCGGTATG 
TGCACTCTCT TGTGCATTGT TTAAAGTCCA TTAGAGACTC ATCCACTGGT TTTAATAGTC 
GGCCTTCCGA TTGGTTTGGG TGTTGCCAGC GGTTTTGTTA CCGGACAGAG CTCTAGGAGC 
AATTGGTTTA CTGTGGGCAC CATTTGAATA AGTATGCTTT TGGCCTCATT GCTAACTAAA 
GTAGACCATG ACACCTCCTC CCGGTAACCC CCCCAAGGAA GTCTTCGGTC CAGTAAGTTT 
TCGCCGGTAA AGGAATCATG GGAAATTCCT CAAGTTCATT CTTTAGGTGT GGACTGTCCT 
TTACGGACTC ATGGGCTACG CTTCGCACCT TACTGTCAAG GCCTTTGACA ACGCTGTGAC 
TCCCTCTGGG ACGTGAGTAA TTCTTGGTAA TATCGCCATC TCGCCATTTT CGCTGAATAT 
TCGGATCATA GTGCCCAGGC GGACCAGGCC CTTCAGTTGT ATTACGCTCA GCTGGGTCTC 
AACCTCATCT GGTCACCCAT CTTCTTCGGT TTCAAGCAGA AGGAAATCGC TCTTGGAAAC 
CTTCTCGCCC TCACCGGGAC TGTGGCCGCA ATGACTGTAA GTGCTATAAA GTAGATGTCT 
TTACTTTTGC ATAACCAGCT GACGATCTTC CTTAGGTTAA GATGCACGAT CTCTACACAC 
CATTCAGCAC CACCTGGTTC TTGGCTCCTT ACTGTGCTTG GCTCGGTTAC GGTAAGTTTA 
TTCAACATCT TTGAAATGAG GCCACAAGCT AAATTTGCGC ATTGATAGCC ACCTACCTCA 
ACGCTGGCTA CATCTTCTTC AACCGGTAAG TGACAGTTGA TTCGAACAAC TATAGCACGC 
CGCTTACATT GTTTCGTATC TAGTGACAGC AGGCATTAAA CTCCCAGCTT CTTGTGGAAT 
CCATTTAATT CTTCATGAAC CGCACCAGGC GTCTGAGAGT GTAGCAATCT TGTACTGTGT 
ATGGGGTGTG TATTCATTAC ATAGTAGTAA GGCGTGGAAA TAAGATAAGA AGAAATGCAA 
CAGTTCCTTC ACTGGGTCTA ATTA
 
Protein sequence
MSPLPEILFD VARNPILAVG LPIGLGVASG FVTGQSSRSN WFTTMTPPPG NPPKEVFGPV 
WTVLYGLMGY ASHLTVKAFD NAVTPSGTAQ ADQALQLYYA QLGLNLIWSP IFFGFKQKEI 
ALGNLLALTG TVAAMTVKMH DLYTPFSTTW FLAPYCAWLG YATYLNAGYI FFNRDSRH