Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNN01350 |
Symbol | |
ID | 3255525 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006683 |
Strand | + |
Start bp | 403820 |
End bp | 404753 |
Gene Length | 934 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 49% |
IMG OID | 638254550 |
Product | conserved hypothetical protein |
Protein accession | XP_568594 |
Protein GI | 58262368 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00166627 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGGC TCTCCCCGTT TCGACCACTC GCCTCTCTGT GTTCCGCCGG ACCATCAAGA ATATCTCGAA TCCCTGCTAG GAAATTTGGG TTTTCGCCTT CGCCTTTGCC CGGACTTGAT GGGTTCTCGG ACGAAGCTGC AAATCCCGTT GTCAGGGATT CTCTTGTACC TATAGTGGTT GAGCAGACTG TGAGTTTTAC TGGATGATCG GATATATTGT GTAAGCTGAC AGAATCAGGC AAGAGGAGAG AGGAGTTATG ATATTTATTC AAGGCTGTTG AAGGAGCGAG TTATCTTTCT TGGTCCTGTA AGCCTGGTGC AACGTGTATG GGATTAATCT GATGTGTTTA TGTAGGTAAA TTCCCAAGAC TCTACGCTTC TCACTGCCCA GTTACTCTTC CTTGAAGCAG AGGATCCCAA GCGCCCTATC AAGCTTTACA TCAACTCCCC TGGTGGTGTT GTTACTTCTG GCTTGGCGAT TTACGACACT ATGCAATACA TCTCTCCGCC GGTGCATACT TTCTGTATGG GGCAAGCGGC GAGTATGGGG AGTCTGCTAT TGGCCGGCGG CGAAAAGGGA CATCGATATG CGCTGAAAAA CAGCAGTGTG ATGATTCACC GTTCGTCGAT CTCTCGGATT TTTCCATGGC CCTAATCGCT GAATATCCCT ATAGAACCAT CTGGCGGTGC GCAAGGCCAA GCATCCGATA TTGCTTTGCA TGCCAAAGAA ATCCTGCGTA TCCGTGCGGC CCTCACCGAC ATCTACGCTG AGCATTGTAC TCGACCTGGA GAAGAGAGGT CCGCTGCATT GGATAGGTTT GAAAAAGCGC TGGAAAGGGA CTATTTCATG ACCTCTGAGG AAGCGGTGGA ATTTGGGATT GTGGACAAGA TTGTGACGCA AAGGGGGAAA GAGGTGTCTG AGGAAGAAAA GTAA
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Protein sequence | MSRLSPFRPL ASLCSAGPSR ISRIPARKFG FSPSPLPGLD GFSDEAANPV VRDSLVPIVV EQTARGERSY DIYSRLLKER VIFLGPVNSQ DSTLLTAQLL FLEAEDPKRP IKLYINSPGG VVTSGLAIYD TMQYISPPVH TFCMGQAASM GSLLLAGGEK GHRYALKNSS VMIHQPSGGA QGQASDIALH AKEILRIRAA LTDIYAEHCT RPGEERSAAL DRFEKALERD YFMTSEEAVE FGIVDKIVTQ RGKEVSEEEK
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