Gene CNN01350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN01350 
Symbol 
ID3255525 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp403820 
End bp404753 
Gene Length934 bp 
Protein Length260 aa 
Translation table 
GC content49% 
IMG OID638254550 
Productconserved hypothetical protein 
Protein accessionXP_568594 
Protein GI58262368 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00166627 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGGC TCTCCCCGTT TCGACCACTC GCCTCTCTGT GTTCCGCCGG ACCATCAAGA 
ATATCTCGAA TCCCTGCTAG GAAATTTGGG TTTTCGCCTT CGCCTTTGCC CGGACTTGAT
GGGTTCTCGG ACGAAGCTGC AAATCCCGTT GTCAGGGATT CTCTTGTACC TATAGTGGTT
GAGCAGACTG TGAGTTTTAC TGGATGATCG GATATATTGT GTAAGCTGAC AGAATCAGGC
AAGAGGAGAG AGGAGTTATG ATATTTATTC AAGGCTGTTG AAGGAGCGAG TTATCTTTCT
TGGTCCTGTA AGCCTGGTGC AACGTGTATG GGATTAATCT GATGTGTTTA TGTAGGTAAA
TTCCCAAGAC TCTACGCTTC TCACTGCCCA GTTACTCTTC CTTGAAGCAG AGGATCCCAA
GCGCCCTATC AAGCTTTACA TCAACTCCCC TGGTGGTGTT GTTACTTCTG GCTTGGCGAT
TTACGACACT ATGCAATACA TCTCTCCGCC GGTGCATACT TTCTGTATGG GGCAAGCGGC
GAGTATGGGG AGTCTGCTAT TGGCCGGCGG CGAAAAGGGA CATCGATATG CGCTGAAAAA
CAGCAGTGTG ATGATTCACC GTTCGTCGAT CTCTCGGATT TTTCCATGGC CCTAATCGCT
GAATATCCCT ATAGAACCAT CTGGCGGTGC GCAAGGCCAA GCATCCGATA TTGCTTTGCA
TGCCAAAGAA ATCCTGCGTA TCCGTGCGGC CCTCACCGAC ATCTACGCTG AGCATTGTAC
TCGACCTGGA GAAGAGAGGT CCGCTGCATT GGATAGGTTT GAAAAAGCGC TGGAAAGGGA
CTATTTCATG ACCTCTGAGG AAGCGGTGGA ATTTGGGATT GTGGACAAGA TTGTGACGCA
AAGGGGGAAA GAGGTGTCTG AGGAAGAAAA GTAA
 
Protein sequence
MSRLSPFRPL ASLCSAGPSR ISRIPARKFG FSPSPLPGLD GFSDEAANPV VRDSLVPIVV 
EQTARGERSY DIYSRLLKER VIFLGPVNSQ DSTLLTAQLL FLEAEDPKRP IKLYINSPGG
VVTSGLAIYD TMQYISPPVH TFCMGQAASM GSLLLAGGEK GHRYALKNSS VMIHQPSGGA
QGQASDIALH AKEILRIRAA LTDIYAEHCT RPGEERSAAL DRFEKALERD YFMTSEEAVE
FGIVDKIVTQ RGKEVSEEEK