Gene CNN00610 details

Gene Information

• Locus tag: CNN00610
• ID: 3255344
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006683
• Strand: -
• Start bp: 198987
• End bp: 202553
• Gene Length: 3567 bp
• Protein Length: 1073 aa
• GC content: 57%
• IMG OID: 638254477
• Product: expressed protein
• Protein accession: XP_568593
• Protein GI: 58262366

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.430818
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTCGACCTG CCCTTTCCCA GCCGCCGCAG CAGACACCCG CCATGGCAGT CCCCCCTCGC 
CGCGTGTCCG TGGCTGCGCC TGCCGCGCCC GCCACCCGGC CAATGGCCAC ATCCAGCCCG 
CCGCCCGCCC CCCCCGCCCC GCCTGAGGGC CGCCTGCACT GGACGCCACA CGCCGGAGAC 
ACCAGGGCGA AGGGCGGAAA GGACAAGGCG GGCTGGGGCG AGCTGCCGGT GGCTGTGCTC 
CAGTAAGTCG CCGCCGCCGC CGCCCCGAAC AGTGACCTGA CGCGCCGTGC AGCCGCATCC 
TGTCGTACGC GCAGCTCGCC GTGCCGCTCG ACCTGACGCT CCAGACGTAC TACGGCCACG 
ACCAGCGCGC ACGCGAGGTT GCGCTCGCAC TGGTCCGGAG GATATGGTTC TGCCGCATGC 
GGATGGTCTG CACTGGGTGG CGCAACGCGG GTGAGTGGCC GCCTGGTCGG TGGATCGCCG 
CGGCTGATTT CACCCATAGT CGACTCGCAT TCCTTCTGGC CAGAATTCAC TCTGCTGCTA 
GACCCCTCTA GACACCACTC GTCGGCCGTA TCCGACATAC AGTCTGCTCG CCTGGCACCT 
TCCACCCCGT CGGTCCCCAC TCTCTTCCAC CGCGCAAGGT CCAGCACGCT CTCCGCCTGC 
CTCGCATGCC GTCTCAACCA CCCTTCACGG CTGGGGTACT ACCCTGCCGT CCGAAAACGT 
CTGACCTTTA CGTCGAAATT CGCTCTGGCG CCGACATGCG AGAAGCACGC CAACAACTTC 
TGCTCAGGTT GCATGCGCGA GAATGAGCCT CAAGCTGGTC GTGTCGGGGC CCTCGTAGAA 
GGCGGGACAC CATCGCCGGG CGAACTCGCT GTCCCCTCGC TTATGTTATC GCAATGCAAC 
CACGGAGACG TGGACGAAAA CGGCGTGGAG CGTTTCCCCC GATCGTTAGT CTGCCCCGAC 
TGCCGCAAAG CGGCGATATG GAATGAAATC CGACTAATAC TCCATGAGTG CGCTCGTGGA 
GGCCGGATGA GGGGTGAGCG GAGCCTGTGG CTGTACAATG AAAAAGTCAA GGATTATATC 
GATTTCAACG TCGGTACAGC GTTCGAGATG GGCTACGCAG CGGTGGAAGA GCAGTGGTTG 
ATTGATCATA CTCGTTGGGT AGAGCTGTCC GAGACAGCTT TGCAATTACA AAACCACGAA 
AAGGCGCTCA AGCTCCAGTT TTTGAGGACG GCAGCGGAAG AGACACCGGC GCAAAAGCGA 
ATGAGATTGG CCAGGGAAGC AGAATTGAGG GGAGAAGATC AAGTGGGCAA AGAGACGGAA 
GAAGAAGCGA TGGAGATGGA AATGCTATAC AGAAGCTGGT GGAAAGAGCT AGAGGATGAT 
GACTTGAGCA GTGATGATGA GGAAGAAGAT GAATTACTAA ACGACAAAGC AAGTCTTTTT 
CTTTTTTCCC CGTTCATGAC CCAGAACCAA AACTAAATTC CACTTGGCAG TTCCGAGGAA 
AACTCAAAGC AGGGTGTATC AACGATTTCA TCAGCGACCG CATCCGTTAC GCCTTTTGGG 
TATCCCCCTC TGACGAAGTT TCCAAAATCG TCACAGATGA TCGTGACCGC CGCATCGACA 
GATCAAGCGT GATCCATACC ATGTTCCCCG ATATTGCACT GAACAGCGCC CACCCCTTTT 
CAAGGTACAT TGAATTCACA TTCGAGCCTG CCCAAGCTTG TGCAGAAGCA GCGGGTCTGA 
TATCCCTCGT GCCCAACGAT CCATCATCAT CCCCGATTTC AGATGGCCGA TTTGACCCAT 
TCTTACCCCC CGACCGCCTC TTACGCGCAC TAGATAAAAC GTTTGCAGAA ATGCTCTCCG 
CGAGGACGAG CACCGCAATG GAGAATATCG TCAGTATGGT ACGAGAGTAT TGTGATGACG 
ATGACGATAA AGCGGAGGAA GTGTGTGAGA ATATGAGGGT GGAGGATATT TTGGGGAGGT 
TGACGGCGTG GCAGATGTGG GTGCCGAGAT CGCTGGCGGA TCAGATGAAG CTCGCGGAGA 
TGCAAAAGGA GATGGAGGCC GAAGGCGAGG TTGACTATGA GGGTGAGGAA TCAGAGGAGG 
ATCTGGAGGG TACCATTGAA GAAGTACCGA CGTCAAGGTC AGGATCCCCG AGGGTAGAAC 
TGGTCGAGGG AGGAGAAGAG GAAGTGCACT TTACACCTGT GGAGGTCCCA CCGTCTGATG 
ACTATCAGCC CTCTCCTCCT TCTTCGTCTT CCCCGCCTCT TACGCTTACC CTTGGGAAAC 
GCAAATCGAC TGATGTTTTC CCGGAACCGA CAGATAAACG TGCTCGCCCA TCTACCTCTC 
CTAATGAACG CGAGCGGAAA CTCGAGCAAC TTCCTCAGAC CCCCCGGAAA CAGATATTAT 
CGCAGGACGA TACTTCCGGT GGGTTGGCCG TGGATACCAG CGCATCTGCT GCCGTTGTGG 
CCTCTGACGG GGGAGGAGCC GGAGGCGGAG GAGGATTGAA AAGAAAAGAA CCGCCTTCTC 
CAGCGGTCAA CCATATTGAT AAAGGACGAA AAGAAGTGAC TCCCCCTCCA GGTCCCAAAT 
TCGATTTGGC AGACGGTCAT GGTTATTATG GGGATAAACG GACGAGAGTG ACGGGAGATT 
TGGTACAAGA AGCAAGTTCT GCGCCTGTAT CATCATTGCC TGGGAGCCCG ACGCCCATGA 
AGAAAAGAGT GGGAGGCGGA GGTGGAGGAG AAGAGGAGGA GGGAGGGGGA TTTGAAGTGG 
ATGTCGAAAC GGAAGAAATG TCACGGAGAG GGACGAGCGT AACGGAGACA GTGGGCACTG 
TACCGGTCAC ACCCGAAGAA GGGATGAGCC TCGGTGGGGA GACTGTCATA GATCCCAAGC 
TGGTAAGCAT GGACCCTGAA GGGTCAGATG TGGACGACCC ACAAGCGCAA TCCGTTCAAA 
CGATTGACAA CCCCCCGCTT GTCGAGCTTG TCACCCCTTC TCCTTCCCCT TCCCTCTCTA 
CCTTCCCAGC CCGATCCCGA TCCCCATCAA CCGTGTCTGC CGCGGATTCC TACTCTTCAG 
GCTCCTCCTC AATCCCGCTT GACGGCGATG GGGACGGCGA TGGCACCCTC ACCCCTCTCA 
CGAGCGCCAC CGCCCGTCTA GCCAGGTATG TGCAACGCGC TCACGCCTCC ACGCCATTCA 
TCCCCTTACC CGTCTGCCGA CTCTTACCTC ATCCCGATCA CCCAGCCCAC CCGAACCAGG 
GTGGACAAGG CGTACAGCTT CCGGTAAACC TGGGAGAAGG AGCAAATAGA GTGTTGCTAA 
ATACGTGGTA CGAGGCAAGA GGGGAGTTGA GAGAATGTAA ATGTAGGATC TGTGAGAGGG 
CGAGGAGAAA GGCTTGGGAG TCGTTGGAGG CGATGAGGCA GTTGGTCGCA AGCGGGGAAG 
TTACGTGGGA GACATTGTTA TCGTAGCTGG ACGAATTTGA CGAGTTGCTA TCCATCGTTC 
CCGATGAAAA AGGGATTGGC GTTTAAGATG ATACTGTTTC CGGGGGATTT GTTGACGGTA 
GACGTCTTAT AAAAGTTGCA TATTAAT 

 

Protein sequence

MAVPPRRVSV AAPAAPATRP MATSSPPPAP PAPPEGRLHW TPHAGDTRAK GGKDKAGWGE 
LPVAVLHRIL SYAQLAVPLD LTLQTYYGHD QRAREVALAL VRRIWFCRMR MVCTGWRNAV 
DSHSFWPEFT LLLDPSRHHS SAVSDIQSAR LAPSTPSVPT LFHRARSSTL SACLACRLNH 
PSRLGYYPAV RKRLTFTSKF ALAPTCEKHA NNFCSGCMRE NEPQAGRVGA LVEGGTPSPG 
ELAVPSLMLS QCNHGDVDEN GVERFPRSLV CPDCRKAAIW NEIRLILHEC ARGGRMRGER 
SLWLYNEKVK DYIDFNVGTA FEMGYAAVEE QWLIDHTRWV ELSETALQLQ NHEKALKLQF 
LRTAAEETPA QKRMRLAREA ELRGEDQVGK ETEEEAMEME MLYRSWWKEL EDDDLSSDDE 
EEDELLNDKA SLFLFSPDRI RYAFWVSPSD EVSKIVTDDR DRRIDRSSVI HTMFPDIALN 
SAHPFSRYIE FTFEPAQACA EAAGLISLVP NDPSSSPISD GRFDPFLPPD RLLRALDKTF 
AEMLSARTST AMENIVSMVR EYCDDDDDKA EEVCENMRVE DILGRLTAWQ MWVPRSLADQ 
MKLAEMQKEM EAEGEVDYEG EESEEDLEGT IEEVPTSRSG SPRVELVEGG EEEVHFTPVE 
VPPSDDYQPS PPSSSSPPLT LTLGKRKSTD VFPEPTDKRA RPSTSPNERE RKLEQLPQTP 
RKQILSQDDT SGGLAVDTSA SAAVVASDGG GAGGGGGLKR KEPPSPAVNH IDKGRKEVTP 
PPGPKFDLAD GHGYYGDKRT RVTGDLVQEA SSAPVSSLPG SPTPMKKRVG GGGGGEEEEG 
GGFEVDVETE EMSRRGTSVT ETVGTVPVTP EEGMSLGGET VIDPKLVSMD PEGSDVDDPQ 
AQSVQTIDNP PLVELVTPSP SPSLSTFPAR SRSPSTVSAA DSYSSGSSSI PLDGDGDGDG 
TLTPLTSATA RLARYVQRAH ASTPFIPLPV CRLLPHPDHP AHPNQGGQGV QLPVNLGEGA 
NRVLLNTWYE ARGELRECKC RICERARRKA WESLEAMRQL VASGEVTWET LLS