Gene CNN00550 details

Gene Information

• Locus tag: CNN00550
• ID: 3255380
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006683
• Strand: +
• Start bp: 187237
• End bp: 189851
• Gene Length: 2615 bp
• Protein Length: 737 aa
• GC content: 53%
• IMG OID: 638254471
• Product: DNA-binding protein cre-1, putative
• Protein accession: XP_568732
• Protein GI: 58262644

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.141726
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATCTAGCAG TCTGGCAGTC CTCAGCACTT CATTTTCACA TTTTCACATT CGGCCGCGTC 
GCCGACTTTT ATCTTCTTTT TTCATCACTG CCTAGGGGAT AATCATCTCT GCTTGGTGAA 
ACGTCCTCCT TCCTTCAAAA ATCCCATCAA CCCTCCTTTC GGGCCACATA GACTACCTCT 
GTGACCGATA TCTAGCGACG GAGTTCATTC GCAGCTCCAC ACATCCAACA ACATCCTTTA 
ATTCCTTATC TTTACTCCAT CCTGCTGTAT TCGACTACAG CCATGTCATC CACAGACAAC 
AACTCTCCCA ATAGTGGAAA CACAAGTGAA AATACCCTTA ACAACCTCCC TGCGCCTATC 
CCCGACCCCA TCACCGGTCG CTTAGATCCC AATGACCCCA CAGTCAAGGC GTTGACGGAG 
GCGGCGTTGA ATATGGATAA GAGCAAGATT CCCCGACCAT ACAAATGTCC TCTATGTGAT 
CGAGCATTCT ACAGGCTAGA ACATCAGGTG AGTTGACCAT TTCGACACCT GAAGGAGCCA 
TGGGGGAAAA GGTAGAGTTA CTGATTGTTC AATGTAGACT CGGCATATCC GAACGCACAC 
GGGTGAAAAA CCCCACGCGT GCACGCATCC TGGCTGTGAT AAGAGATTCT CACGTTCCGA 
CGAGTTGACA AGACATGCGA GAATCCACTT GCCAACAGCA AACGAGAATG GGTCCAAAGG 
AAAACACAAG TATCATGATG ACGAGGTGAG CAAATTTCAT ATCTGACAAA TGGGAACTGC 
GTTGACGTAG ACAGAATGAC AACGACGACC ACCGATCCCA CAGCCTTCCT CATCTCGGTC 
CTTCATATAA CATGGATGTC GACCGTTCAA GCTACCCATA TAACCTCCAT TCACTCCAGA 
TGAGCGGTCC CAGTGGCGGC ATCAGCGATA TCTCTGCTCT CGCCGCGGCC GCTTCCGATC 
AGCTCATTGA ACTTGAACGA CACGAGGCAT TTCGGCGAGC AGAATGGGAG TTGCGCCATC 
GACAAATAGC TGGTGCCAGG AAGAGCAATG GTGGAAGTCC AGTGGGGACG CCTGGAGGAC 
CGTATGGGTT CTCAAATGAG CGCGAGAGGA TGTCTTTGAG CGGTGTTCCC ACACCAAACG 
GTGGCCAATT GGTGTATCCT GTTTCTGCTC CTCAACCCGC CACTGGCACC CTTCCAGCTG 
TCCCTGCTGG CACTTTGGCC GACCCAACCT ACCTCGTCCC ACCAACGTGC TGCCATGACG 
AATGTCACAA ATCATATCGC AAGCGACTCA AGCTCGCAAA GCAAACGGCT GCTTGCCCCA 
ACTGTTTAAC TTTGGCTCAT CCTGGTAACA ACTCTAGTGG ATTTGGTGGT CTTGGTGGTG 
CCGGGTACGG AAGCGGTGGT GGCGACAGCC ATCATTCAAG TAGTTCCAAT ACGCCCAAGG 
ATAGGTCGAC ACATAACTCA TCAGAGGACT TGACCAAGTT TGCGGGTGGC GGACAGAGTC 
ATTACAGCTT GCAACAAGCC AATTTTGCCC AGGAGCTAGC AACTCTGCAG TTCCAACACC 
TCCAGGCTCT TCAGCGAGCT CGTTCCGGTA CCTCGGGTCA CAACACTCCT CATTCTGCAC 
CGCACTCCAA TTCACAATCT CGATCACAAT CTCATTCTGC TTCTCCCGCT ATTCCCGTCC 
CTCCCAACCA TCTCCGCCCT TACACTATCG ATCTCCACTC ACATCGTGGT GGTTTGAATT 
CGTCACACGT CTCTGCGGCT CCTAGTCCGG CTTCCAGTGA TGACAGCGAC GAAGAACCCA 
TGAACGAGAT TATCTCTCAT GGACCGTTCG ATTTCACTCC CGCTACAAGC CCGGTGTTGA 
GTGGTATGCG TCAGATGTCT TTGTGGCAGG GCAAGGCTAT CACAGCTCCA CCTTCGCGAG 
CGACTAGCCC GGTGCACAGC ATTTCTCGTA ACCCTTCTCG CGCAGGTTCA CCAGTCGAGG 
GCCACAATGC CAATTCTGGT AGGCATGGCC ACACCTCTCA TTCGGCCCGG GACGCGAAGA 
ACCGCTCACA TCCTTACACT CACCACTACT CTACTACTCC TAACTCTCCT CACTTTCCTG 
CCGTCATCAA GTCTCGCATG TCTCCACCCA AGCTCAATCG AACATTAAAC GGTGTTAACA 
ATGGCAACAA GACTGTTCAG GATATCTTGA ACGGTCCTTC CATCCCTCCG CCACCTAGCG 
ATAGGATGCT TCCCCCTCCT AACTCTTCCG GTAGCTTCAC CGCAGTTCCT AGCGTCAACT 
ATTCTATCAC TTCTCAACCG ACTTCTGCTC ACCAAAGCCC CAATACCTCC CGCGCCTCTT 
CTCCCACACA CCTATCATCA AGTAACGCCG GCGGTCACAA CAGCCACAGT CATATAATCC 
ACGGCGTCCG CGCGGCGTTT GGGATGACAC CAATAAGCTC GATGTCGCGG GAAGGCAAGG 
CTAGCGGGCA ACATGTGAGC TCAAGCTACA GTCCTCCGCA TAAGCTTGCA CCGTTGGGGA 
TGGGAGGTGA AGGTGTGAGG TTGCCGAGTT TGAGCAGGGG TAGTAGTCCG GTGCATTTCG 
ACCACATAGG GATGGAGCTG GATGGGCATT CGTAG 

 

Protein sequence

MSSTDNNSPN SGNTSENTLN NLPAPIPDPI TGRLDPNDPT VKALTEAALN MDKSKIPRPY 
KCPLCDRAFY RLEHQTRHIR THTGEKPHAC THPGCDKRFS RSDELTRHAR IHLPTANENG 
SKGKHKYHDD ENDNDDHRSH SLPHLGPSYN MDVDRSSYPY NLHSLQMSGP SGGISDISAL 
AAAASDQLIE LERHEAFRRA EWELRHRQIA GARKSNGGSP VGTPGGPYGF SNERERMSLS 
GVPTPNGGQL VYPVSAPQPA TGTLPAVPAG TLADPTYLVP PTCCHDECHK SYRKRLKLAK 
QTAACPNCLT LAHPGNNSSG FGGLGGAGYG SGGGDSHHSS SSNTPKDRST HNSSEDLTKF 
AGGGQSHYSL QQANFAQELA TLQFQHLQAL QRARSGTSGH NTPHSAPHSN SQSRSQSHSA 
SPAIPVPPNH LRPYTIDLHS HRGGLNSSHV SAAPSPASSD DSDEEPMNEI ISHGPFDFTP 
ATSPVLSGMR QMSLWQGKAI TAPPSRATSP VHSISRNPSR AGSPVEGHNA NSGRHGHTSH 
SARDAKNRSH PYTHHYSTTP NSPHFPAVIK SRMSPPKLNR TLNGVNNGNK TVQDILNGPS 
IPPPPSDRML PPPNSSGSFT AVPSVNYSIT SQPTSAHQSP NTSRASSPTH LSSSNAGGHN 
SHSHIIHGVR AAFGMTPISS MSREGKASGQ HVSSSYSPPH KLAPLGMGGE GVRLPSLSRG 
SSPVHFDHIG MELDGHS