Gene CNN00540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN00540 
Symbol 
ID3255432 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp182603 
End bp185228 
Gene Length2626 bp 
Protein Length442 aa 
Translation table 
GC content45% 
IMG OID638254470 
Productconserved hypothetical protein 
Protein accessionXP_568587 
Protein GI58262354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATTAATAAG GAAGGAGAAA GAGTGCAATC ATTGTCTTAA GTACAGGAGA GGTATGAAAC 
GTCAAACAGT GAGTTGCTAT TCTTGCATCG ACAGTCGAGG ACGTGAAGAG ATGAGGACCA
CACGGTCACC TCAACAACAG CCCACGCGCC ATCCATTGTT GCTTTCAACG ATCGAACCAT
CATGAGACAA ATGAGATAAT ACGATATCTT GGCTACAGTT ATCATGTCCT GCGACTTTTA
AAGGCCATGT CGACTGATGC GTCTTACAGC CACAGATCCT AATTCATCCT TTCGATGTCT
AGCTTGGTTC ACATTCCTTC GCGGGCAAGA AGTACCAGTA GTCTAACTTC TACCTCCATG
TCTATTTTCC CTGCAGAACT TTCTGTACAA TGTTCGGGTG AAAGCGATTC GCTTCTCCAA
TCAGAGTCCA TCCAAGCAGA GGAATCTAAA CTCAATACTT GGGCTCTGGC CTGTTTATTG
CTGCAACATC TTTCCAAGTG AGGGTCCATT GTCTCGGACT TCGAACACGA CAAGCTGACC
GACGCAGTAC CTTCAATACC GGATTATACC AATTTGCGAT ATTCCTTTTC TGTAGGTATT
GCTTTAATAG CTTGTAGAAG CGTTACGACA CGAAAGGCGG CAAAGAGGAG CTGTCATGAA
CCGTAAATGC TGACGTGGTT GCAGTGATTG AGGTCTATGC AAACACACTG GTCCCTGCTT
CTTTGGTTGG CCTTTTCTCC ACGCTTTCGG GTCTGGTGTT TTCTGGATGG GTTGGGGGTC
TAGTCGACCG TATGCCACGC TTGAAATTTA TCAGATTCAC CATAGGAGGC GAAAAGATTT
TCATTGCTTG CAACTATGCT CTTTTCATAA GTGTGTTTCC TGTGCATGAT ATTTTTTATA
ATGCCTGATT ATGTTTGTAG TTTTGTTCGG TCCGTTACGG AGCGTCGCTC AACCAGCGTT
CCACGGTCAA GCCAAGTGGA CCGATGTTGT GGCGGTTTGG AGCATTTTAC TATTCACCAT
TGGCTTCTCA ATTGGAATCA ATCTGGCCAA TAGCGGAGTC ACAGTAGCTA TCGAGCGAGA
CTGGTAAGAA AAGCCATCTT CGACATCGAA ACCTTTCTGA CCAGTGGTAT AGGGTTACCA
CCATAGCACA TGGTGAACCC AACCATCTTA CTCTTCTCAA CACATACATG AGGCGAATAG
ACCTGTTCAG CAAATTAATG GCTCCTGTAA GTCTCATTGT CTTTCTCAGA TACACGTGCT
CAGCTCGATT AGCTCTTTGT ATCCCTGTTG ACTGCAATTT GGAATTACTC CATAGCGACT
TTCATACTCT TAGTCATGTC TTTGAGCAGT TTCGTCACCG AATTCATGTG GACAGAAGTT
GTTTACAAAC GATTCCCAAT ACTATCAGAG GATGAAGAAA TAAGAAAGGG CAATAGTACT
CTATCAATGG GCGAGCATCA ATTTGAGGGA AATCGAGTTT CTTCTGTGAA GTTATTCAAG
CAATGGCTAA AGAGAGAAAG GGACGACTGG ATTGAGTTTT ACCACTTACC TATCTTTGCA
AGTGAGTGGT CACGATACAC TGTCCAACGA CCTCGTTTGC TAACCCTGGA CATCTCAGGT
TCAATCTCCA TGAGCACCAT TTATCTCACC ACACTTTCAT ATGATGGTAC TTTCATCTCC
TACGTCAAAG CCGCTAGAGG ATGGAACGAT ATGTTCATTG CCCTGATGAG GGTGGGTTCA
AATATTCGAC TAGATAACAA TGACTGATCC CAAGTTAGGG CTTGTGCGTT GTTACTGGGT
TGGTTGGAAC TTGGGTGATG CCGCGGCTTG AGAAGAAGAT TGGCCTTGAA AGGGCAGGTG
CCTGGTCCAT CTGGTAAGAG TATATAAACA CAACTCCTTT GCATACGTTT CGGGACTTAC
CAGGCTCGTT CACACGAATA GGTTCGAGAT ATGTTGTCTT TTCCCCGGTT TTGATATCAT
TCTTTGCTGG GGCAGGCAAG TATGGCGAGC ACGGACCTGC GTGGAATTCT CTCGTTCTCT
TCGGAGGTGA ATAATTACAC GTCTGAATCA GACTTCGCGC ACGTATTGAT TTTTCTTCCT
TCAGGAATCG CCTTATCCCG TATAGGTCTA TGGTCATTTG ACCTTTGCCA GGTGAATCAT
TCTATTCAAT TTTTGAGTAA TCATTCTAAT CGTTCTTCTT TATAGCTCAA AGAGCTCCAA
CTCGCACTTG ATGATCATCC CCGCCGTAAT CGCCTAACAG CCCTCCAAAT TTCTTTACAA
AACCTTTTCC ATCTTCTTAA GTATGCGGTA ACCCTCTCTG CTTCGACTCC TAAAGAGTTC
AAGTGGACTG CTTTGGTTAG TTTCGGCGCT TTGCTCGTCG GCGGATGTTC GTACACCATC
TATCTTCGAG GTGTCCGAGG ACATTTGATA CATTTTGATT GGTGCAGAAA GATAATGTAG
AATTGGGGGA GTTTGTTTAG ATGGCTGTTG TCATACTGAG GGTTGAAGGC TGAAGGCGGG
AGGAACCTTC TTATGGTGAT TGTAGATTGT AGACTTTTTG CTCATAAGGA TATGGATAAC
AGCACTCGTT GTCTGATAAC ATCAAGACTG CTGCCCGTCT TACATG
 
Protein sequence
MSSLVHIPSR ARSTSSLTST SMSIFPAELS VQCSGESDSL LQSESIQAEE SKLNTWALAC 
LLLQHLSNTF NTGLYQFAIF LFLIEVYANT LVPASLVGLF STLSGLVFSG WVGGLVDRMP
RLKFIRFTIG GEKIFIACNY ALFIILFGPL RSVAQPAFHG QAKWTDVVAV WSILLFTIGF
SIGINLANSG VTVAIERDWV TTIAHGEPNH LTLLNTYMRR IDLFSKLMAP LFVSLLTAIW
NYSIATFILL VMSLSSFVTE FMWTEVVYKR FPILSEDEEI RKGNSTLSMG EHQFEGNRVS
SVKLFKQWLK RERDDWIEFY HLPIFASSIS MSTIYLTTLS YDGTFISYVK AARGWNDMFI
ALMRGLCVVT GLVGTWVMPR LEKKIGLERA GAWSIWFEIC CLFPGFDIIL CWGRQVWRAR
TCVEFSRSLR RNRLIPYRSM VI