Gene CNN00410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN00410 
Symbol 
ID3255520 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp139139 
End bp142143 
Gene Length3005 bp 
Protein Length662 aa 
Translation table 
GC content50% 
IMG OID638254457 
Productcytoplasm protein, putative 
Protein accessionXP_568566 
Protein GI58262312 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCTCCGTCC CCGTCATTCT TCCTACCAGC TCCTTTGCCA CCCTCTTTTG CCACCCATCG 
CCCGTCCAGC CCACACAGCA CACGTCACCC GAAGGGACCC GAGCGCAGAT CCCTCTTTTG
ACACTTCCTT TCATACGTTA CAATATCCTA GCGTACACCT CATCCAGACG GGCAGCTTCC
CGCCGTCTTC CATCTCCCAT TCCGGCCTTC ATTTCTTCCT TCCTTCCTAC TGCAGCACCA
TCTATGGACC AGCAATCATC TTCATATCCT CCTTCCTACC ATGTTTCCAC CCGTCAAGCT
TTCGACTCCC AAGCTTCTTC TCACCACACT CGGGACTACC AGCGGCGGCG AGACGAGCGG
CACGCTCAAA GAGACGCGGC ATACGCTGGA GATGTAGAGC GGCGCGGTAC TGAGAATCCT
TATTGGGACC CAAGAGGCGC ACCACCGAAT GTGGGCGTCC AACAACCTCT GTACCTATCG
CGTGCAGGAG ATCGACCGAT AGCGTCACGT ACAGGCTCAG GCTCGGGCTC CTTGCCTTCA
AGCCACTTGT TATCAGATGC CGAGCTAGGT GCGAGTCCAA ATGTATTCGC ATTACCGAGC
AAAGAGGGGG GGTATCCTGA AGGGTGGACG AAGGAAGACG AAGAGGCGGA AAGGGAATTT
ATGAAGCGAG GCATGATTGA TTGGAATGAG CTGAAAAGTT GGAGATTCTG GATAAGGAAA
GAATGGTGGT GTGAGTGTTG TTAAACCTTT CCAGGGAGAC ACCTCGTTGA TTTAAATATA
GATTACTACA TCATCCTAGC GGTGATCTGT GTGTTGGTGA TTCTAATGTC TGTCTACCAT
GACGATGTGA GTCTTCCTCT GCAAAGGGGA AACCTTGAGC TAATACAAGA CAAGATTGTC
AATTGGATGA AACCAGCTGC CAATTGGATG AAAAAGTGAG CGTTAAATAA TGATTCGCAT
ACTCAAAACT TACACTATAT AGCCTTACAG CAGGATGGGT CATTCCTATC GGTTCGTGCT
TCTCTAACCC CTGCAACTCA ACTAACTCCT TTCACAGCCG TCTTTTTCGT CATCTCCTTT
CCTCCTCTCT TTGGCCATGA AGTAAGCCAC CCCTCTCCCC ACTGTTCAAA TCCCTCAATG
AATCCCTCAC TGACCACAAA CACCCTAGAT CGTTGCAATC CTCGTCGGAG CCGTCTGGGG
CCTCTGGATA GGTTTCGGCA TCACCGCAGC CGGCACCCTC CTCGGTGAAA TTGGAAACTT
TTACGCATTC AAATATTGTC TCCGCTCCAC AGCTGAAAAG TATGAGAAGA ATAATATTAA
TTACGCTTGT TTGGCACATG TGGTTCGGGA GGGAGGGTTT TTCATTATTT TCGTAGCGAG
GTTGAGTGCT ATCCCAGGGT AGGTCGATTT TTATATCTCT CTCCCTCTTC TAGAGGCGAT
CAGATCAGGT TCGGGCCGTT GGATCAGTTG GAGGCTAAAT GATGAAAATA AGGCATTTCA
CGACGGCAGT GTTTGCTACG TGCGGTATGA ACATTTGGAT CTTCACCCTC GCCGCTATCC
TTTCGTTGCC TAAACAGGTG AGTAGATCAG CGGAAGCGGG GAATGAGGCG GACTACCTGA
CATTCTTTCT TTAGCTCATC GTAGTCTACC TCGGTGTCAT GTTCGATTCT GAAGAAAAGA
GTACAAAGGA AAAATGGATA TCCCATGGTG TCCTTATCTT TGGGTTTAGT ACGTCCCCTT
GTCCCCCGTC CCACCCACCC CTCCCCCTGC CGTTCTTTTT GAGCTAACCA CATTTCCAAT
AGTCATCACA CTCTGGTCAG CATGGTACAT CTGGCGTAAA ATGCAACAAG CCCGCCTAAT
CGTATGGCGT CGCCGCCGGA TTGAAGCAGC TGCGCAAGGG TTAGTGCTTG ATCCAATCAC
TCTGACCGCT CGGCCTAGTA GCCATGCTGG AGGTCGTGTC GGAGAAAGCG GTGTACGTTC
ATCTGGATGT GACAGGGATG GGAACGGGGA GGATGGGTAT AAAGAATGGG AACGGGTAGT
TCCCACGATG GGACGGAATG GGGATGGGGA GGATGAAGCG CAGAGTCCTA TTTTGAGAGA
GCATAGGAGA GATGAGAGAG AAGGAAGAGT GGGGTATGGA GGGTTGGGCG TCCCCGGCGG
CAGTGGTGGT GCGGGTGCGG ATGCAGGGAG ACATCAGAGT TATCAGAATC CTTATGATAT
CAGGTACGTC GCATAATCCC CCATTCCGTA TCCCCCGTTC TCAGTCTGGA CTCATCATCT
AGAAGAAGAT GGGCAAAACG CAAAAAGATT TGAAATAATC GCTAACACCC CGATTTGTAG
GTACCAAAAC GCCGATGAAA TGTCTGTATA TGACGTCGAC GTGAATGGTC CACCGGTACA
TGCTGCGGGT GAGCGCGATA TAACGTATGG GTATGGGTAT CGACCGGCTG TGTCTTCCGA
GACGTTTTTG CCACCGCAGC AGCAGATATC GGTGCAACGC CCACCCCAAC TCCAGCATCA
GCCTCCAGAG AAGCAGTCGT CAATTCTTTT TGTTCCACCC TACTCCCATT CGCAATCACA
ATCTCACCCA CAAATCCATT CACAATCACG ATCACAATCA CACCTACATT CCCCATCAAA
CTCCCAACCC GAAGGAACAG TCGTCTATTT CCCTGAAGCA CATTCGACAG GGATCGAATC
TACTCCCGAC GGGAACCTCG GACTGGCAGG CCAGTCAGAA ACTACGGTTC ATCGATCGGC
GACCAAGGCA ACAGTGTACG CCAAGGAAGA GGGAAGTGTG GCTTTTCCCA AACCGAAGCC
AAATCGGATA TGAGAACCTG TGGCTTTTTC AAGCTGGACA TTTGAACGAA ACATGATGAA
ATTCAGAAAC GAAAGAGGGT AAATGGAATG AAAAAATATG ATTTTTTTCT GATGACTTCC
CAAGACGGGC CGCTTGATGC GATGCTGTAA TGCGATTAGA TTTATGATGT ATGTTGTGAC
TTGTT
 
Protein sequence
MDQQSSSYPP SYHVSTRQAF DSQASSHHTR DYQRRRDERH AQRDAAYAGD VERRGTENPY 
WDPRGAPPNV GVQQPLYLSR AGDRPIASRT GSGSGSLPSS HLLSDAELGA SPNVFALPSK
EGGYPEGWTK EDEEAEREFM KRGMIDWNEL KSWRFWIRKE WWYYYIILAV ICVLVILMSV
YHDDIVNWMK PAANWMKNLT AGWVIPIAVF FVISFPPLFG HEIVAILVGA VWGLWIGFGI
TAAGTLLGEI GNFYAFKYCL RSTAEKYEKN NINYACLAHV VREGGFFIIF VARLSAIPGH
FTTAVFATCG MNIWIFTLAA ILSLPKQLIV VYLGVMFDSE EKSTKEKWIS HGVLIFGFII
TLWSAWYIWR KMQQARLIVW RRRRIEAAAQ GLVLDPITLT ARPSSHAGGR VGESGVRSSG
CDRDGNGEDG YKEWERVVPT MGRNGDGEDE AQSPILREHR RDEREGRVGY GGLGVPGGSG
GAGADAGRHQ SYQNPYDIRY QNADEMSVYD VDVNGPPVHA AGERDITYGY GYRPAVSSET
FLPPQQQISV QRPPQLQHQP PEKQSSILFV PPYSHSQSQS HPQIHSQSRS QSHLHSPSNS
QPEGTVVYFP EAHSTGIEST PDGNLGLAGQ SETTVHRSAT KATVYAKEEG SVAFPKPKPN
RI