Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNN00410 |
Symbol | |
ID | 3255520 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006683 |
Strand | - |
Start bp | 139139 |
End bp | 142143 |
Gene Length | 3005 bp |
Protein Length | 662 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254457 |
Product | cytoplasm protein, putative |
Protein accession | XP_568566 |
Protein GI | 58262312 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCTCCGTCC CCGTCATTCT TCCTACCAGC TCCTTTGCCA CCCTCTTTTG CCACCCATCG CCCGTCCAGC CCACACAGCA CACGTCACCC GAAGGGACCC GAGCGCAGAT CCCTCTTTTG ACACTTCCTT TCATACGTTA CAATATCCTA GCGTACACCT CATCCAGACG GGCAGCTTCC CGCCGTCTTC CATCTCCCAT TCCGGCCTTC ATTTCTTCCT TCCTTCCTAC TGCAGCACCA TCTATGGACC AGCAATCATC TTCATATCCT CCTTCCTACC ATGTTTCCAC CCGTCAAGCT TTCGACTCCC AAGCTTCTTC TCACCACACT CGGGACTACC AGCGGCGGCG AGACGAGCGG CACGCTCAAA GAGACGCGGC ATACGCTGGA GATGTAGAGC GGCGCGGTAC TGAGAATCCT TATTGGGACC CAAGAGGCGC ACCACCGAAT GTGGGCGTCC AACAACCTCT GTACCTATCG CGTGCAGGAG ATCGACCGAT AGCGTCACGT ACAGGCTCAG GCTCGGGCTC CTTGCCTTCA AGCCACTTGT TATCAGATGC CGAGCTAGGT GCGAGTCCAA ATGTATTCGC ATTACCGAGC AAAGAGGGGG GGTATCCTGA AGGGTGGACG AAGGAAGACG AAGAGGCGGA AAGGGAATTT ATGAAGCGAG GCATGATTGA TTGGAATGAG CTGAAAAGTT GGAGATTCTG GATAAGGAAA GAATGGTGGT GTGAGTGTTG TTAAACCTTT CCAGGGAGAC ACCTCGTTGA TTTAAATATA GATTACTACA TCATCCTAGC GGTGATCTGT GTGTTGGTGA TTCTAATGTC TGTCTACCAT GACGATGTGA GTCTTCCTCT GCAAAGGGGA AACCTTGAGC TAATACAAGA CAAGATTGTC AATTGGATGA AACCAGCTGC CAATTGGATG AAAAAGTGAG CGTTAAATAA TGATTCGCAT ACTCAAAACT TACACTATAT AGCCTTACAG CAGGATGGGT CATTCCTATC GGTTCGTGCT TCTCTAACCC CTGCAACTCA ACTAACTCCT TTCACAGCCG TCTTTTTCGT CATCTCCTTT CCTCCTCTCT TTGGCCATGA AGTAAGCCAC CCCTCTCCCC ACTGTTCAAA TCCCTCAATG AATCCCTCAC TGACCACAAA CACCCTAGAT CGTTGCAATC CTCGTCGGAG CCGTCTGGGG CCTCTGGATA GGTTTCGGCA TCACCGCAGC CGGCACCCTC CTCGGTGAAA TTGGAAACTT TTACGCATTC AAATATTGTC TCCGCTCCAC AGCTGAAAAG TATGAGAAGA ATAATATTAA TTACGCTTGT TTGGCACATG TGGTTCGGGA GGGAGGGTTT TTCATTATTT TCGTAGCGAG GTTGAGTGCT ATCCCAGGGT AGGTCGATTT TTATATCTCT CTCCCTCTTC TAGAGGCGAT CAGATCAGGT TCGGGCCGTT GGATCAGTTG GAGGCTAAAT GATGAAAATA AGGCATTTCA CGACGGCAGT GTTTGCTACG TGCGGTATGA ACATTTGGAT CTTCACCCTC GCCGCTATCC TTTCGTTGCC TAAACAGGTG AGTAGATCAG CGGAAGCGGG GAATGAGGCG GACTACCTGA CATTCTTTCT TTAGCTCATC GTAGTCTACC TCGGTGTCAT GTTCGATTCT GAAGAAAAGA GTACAAAGGA AAAATGGATA TCCCATGGTG TCCTTATCTT TGGGTTTAGT ACGTCCCCTT GTCCCCCGTC CCACCCACCC CTCCCCCTGC CGTTCTTTTT GAGCTAACCA CATTTCCAAT AGTCATCACA CTCTGGTCAG CATGGTACAT CTGGCGTAAA ATGCAACAAG CCCGCCTAAT CGTATGGCGT CGCCGCCGGA TTGAAGCAGC TGCGCAAGGG TTAGTGCTTG ATCCAATCAC TCTGACCGCT CGGCCTAGTA GCCATGCTGG AGGTCGTGTC GGAGAAAGCG GTGTACGTTC ATCTGGATGT GACAGGGATG GGAACGGGGA GGATGGGTAT AAAGAATGGG AACGGGTAGT TCCCACGATG GGACGGAATG GGGATGGGGA GGATGAAGCG CAGAGTCCTA TTTTGAGAGA GCATAGGAGA GATGAGAGAG AAGGAAGAGT GGGGTATGGA GGGTTGGGCG TCCCCGGCGG CAGTGGTGGT GCGGGTGCGG ATGCAGGGAG ACATCAGAGT TATCAGAATC CTTATGATAT CAGGTACGTC GCATAATCCC CCATTCCGTA TCCCCCGTTC TCAGTCTGGA CTCATCATCT AGAAGAAGAT GGGCAAAACG CAAAAAGATT TGAAATAATC GCTAACACCC CGATTTGTAG GTACCAAAAC GCCGATGAAA TGTCTGTATA TGACGTCGAC GTGAATGGTC CACCGGTACA TGCTGCGGGT GAGCGCGATA TAACGTATGG GTATGGGTAT CGACCGGCTG TGTCTTCCGA GACGTTTTTG CCACCGCAGC AGCAGATATC GGTGCAACGC CCACCCCAAC TCCAGCATCA GCCTCCAGAG AAGCAGTCGT CAATTCTTTT TGTTCCACCC TACTCCCATT CGCAATCACA ATCTCACCCA CAAATCCATT CACAATCACG ATCACAATCA CACCTACATT CCCCATCAAA CTCCCAACCC GAAGGAACAG TCGTCTATTT CCCTGAAGCA CATTCGACAG GGATCGAATC TACTCCCGAC GGGAACCTCG GACTGGCAGG CCAGTCAGAA ACTACGGTTC ATCGATCGGC GACCAAGGCA ACAGTGTACG CCAAGGAAGA GGGAAGTGTG GCTTTTCCCA AACCGAAGCC AAATCGGATA TGAGAACCTG TGGCTTTTTC AAGCTGGACA TTTGAACGAA ACATGATGAA ATTCAGAAAC GAAAGAGGGT AAATGGAATG AAAAAATATG ATTTTTTTCT GATGACTTCC CAAGACGGGC CGCTTGATGC GATGCTGTAA TGCGATTAGA TTTATGATGT ATGTTGTGAC TTGTT
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Protein sequence | MDQQSSSYPP SYHVSTRQAF DSQASSHHTR DYQRRRDERH AQRDAAYAGD VERRGTENPY WDPRGAPPNV GVQQPLYLSR AGDRPIASRT GSGSGSLPSS HLLSDAELGA SPNVFALPSK EGGYPEGWTK EDEEAEREFM KRGMIDWNEL KSWRFWIRKE WWYYYIILAV ICVLVILMSV YHDDIVNWMK PAANWMKNLT AGWVIPIAVF FVISFPPLFG HEIVAILVGA VWGLWIGFGI TAAGTLLGEI GNFYAFKYCL RSTAEKYEKN NINYACLAHV VREGGFFIIF VARLSAIPGH FTTAVFATCG MNIWIFTLAA ILSLPKQLIV VYLGVMFDSE EKSTKEKWIS HGVLIFGFII TLWSAWYIWR KMQQARLIVW RRRRIEAAAQ GLVLDPITLT ARPSSHAGGR VGESGVRSSG CDRDGNGEDG YKEWERVVPT MGRNGDGEDE AQSPILREHR RDEREGRVGY GGLGVPGGSG GAGADAGRHQ SYQNPYDIRY QNADEMSVYD VDVNGPPVHA AGERDITYGY GYRPAVSSET FLPPQQQISV QRPPQLQHQP PEKQSSILFV PPYSHSQSQS HPQIHSQSRS QSHLHSPSNS QPEGTVVYFP EAHSTGIEST PDGNLGLAGQ SETTVHRSAT KATVYAKEEG SVAFPKPKPN RI
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