| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNN00400 |
|---|
| Symbol | |
|---|
| ID | 3255357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006683 |
|---|
| Strand | + |
|---|
| Start bp | 134174 |
|---|
| End bp | 138758 |
|---|
| Gene Length | 4585 bp |
|---|
| Protein Length | 1326 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638254456 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568564 |
|---|
| Protein GI | 58262308 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC CAGTGCTTCG CAAATCCAAA TCCAACCTCC GCCAAAGGCT AGGCCTCGCA
GTCGCAGCCT CCAGACCCAC CCACCTCTCC CCTATTGCTT CACCGTCCAC CGCCAACCTC
GCCTCGTCTA CTTCCACTAT GGCGTCTGCC ATCTCGCGCA CAGACTCTCG ATCGGCATTT
ACGTATGATT CTGCCACTCC CAGTCCACCA ACAAAACAGA TGGATTTCGA CACTGTATCG
TACAATAGTG CGATGTCGGC AAGTCCTGGT GAATACACGG AAAAAGATGA CATGTCTGCT
TCAACCCTTG TTTCATCCGA AAATGCCCAT CAGCAGCAAC AACTGACCCA ACAAATCACA
CACACTGAAC CATACCAACC CCCTACCCAA TTCCATCCTC CAGGGGAAGA TACCCTCCAT
CCAAACATTG CCACGGTTAC CTCTGGCGCT GACGATATCT TCTCCCTTAC CGACCAGCAG
CTTTCGGATC GATTCACATT CATCTCTGAA ATCGGATTCG GCAACTGGGG GAGTGTATGG
TTGTGCAAGC CAAAACATGC GAGGAGCAGT CAACTGTCAG AACCCGGAGG GGTTGTTAAG
CTAGGAAAAC AGGCGGCTGC TAGTGGAGGC AGCGGTGCTG GGGGTAAAGT TGCTATCAAG
CTTGTTCATA GGAGTAAGAC CGCAGTGGGT CCTGTCTCTA GAGGCTAGGA GCTTGGCTAA
CAAGGCAATT CATAGACTAC CGCTGCAAGA GTCAGAGCGC TTTGGGGCGA GATGAAGATC
ATTCGAGCGC TTCGACATGA GCCTCACCCG AGTATCATCC AATTTGAATC CTTTGTCATT
ACTCCAAGTT ATGCTCTGTA AGTCTTCTCC TTATGCCCCT CCCGACGTAT ACTAAAAACC
CACGGCAGCG TTATCATGCC GCACCTCTCC CACCTCATCC CCGTCTGTCT TCCTCCTTCA
CGCGCAACCC CTTACTTTCG CCAACTCGCC TCTGCAGTCG GTTACCTGCA CGAACGCGGT
ATCACCCACA ACGATATCAA ACCCGCCAAC GTCTTGTTGA GTCATAATGA TATTCCCGTC
TTGGTCGATT TTGGTTTTGC CCAAAAATGG GATGTCGGCG CAAGAGGTAG TTTTTTAAGC
TCGATTAGTT GGGGGACACC AGAGTACCTT GATCCCCAGA GAGCAAAGGG TATGCCGCAC
GATGAGCGTG CTTCTGATGT CTGGTCTCTA GGCGTAAGCT CCTCTTTCCT TCCGAGCCTC
GAGATGAACT GGGCTGATAA ACAATGGGCT TGCGTAGATC ACAATGTTTG AAATACTCAT
TGGTAGGACA CCCTTTGAAG CCGACGACCA AGAACAGTTC TCCACCCCCG AAGAACTCGT
CATTTACTAT GAGCGTACTC GCAAAGGTCA ATGGGTAGGC CAGTGGTCCA TTCCATCCGG
TATCGAGACG TTGTTGCGCC AGATGATCAA CCCTGATCCG GTATACCGTG TCACTGCGAT
GGAAGCGTAC CATCATCCGG CTTTGCAGCC TGAAGCGCCC AGCGTAATTA TCACGCCCCA
CTTTGTCAGG GCTGCAGCGA GCTTTGATGT GGAAGAACCT CTTCCTGCTC CTCCTGCTCA
AACCCATGCG GCAGAGGATC ATACCCTGGC CAAGGATGAC AGGGAGAAGG AAAAGGAGAA
ACGTAAATCC AAACGCAAGG CCAAACGCGA CGATGCCACA TCCCATGAAC CCCGCTCTCA
CTTCCGCTCT ACGACTCCCG CCCTCGGCGA ATCTATCAAG CAGCACACTT CTGTCTCGAA
GCCGAAAAGA GATTGTGATG ATCTGGGCTC TAGAGTAGGA TCCGGGATAG GTAGTGGAAA
GGAGAATGAG CATATGGAAG TTGGTGGAGG GAAAGAGAAG GAAAAGGAGA AAAAGCAGAG
CAAGTTGGTC ATTAAGAAGC TGAGGATGGA GGAGGAAGGG CACGACAAGG ATGCGGGCGA
GGACCCGACT CGTAAGCAGT CTTTCATTGA TATTTGGCAG CTCGACGTGT GAAGGAATTT
GAGCTGATGA GATTGGCCTT GACTTTTACG TAGCTACCAA GATGACAAAG CCCGCTCAGC
CACTCACGAT CAAGGAATAT TCGTACATCG GTACGTGGCC GATCTGAGAA GACTTTTTGA
GTTTGTGCTG ACGAGCTTTT TCTTTTATTG ATGGTAGCAG ACAAGAAGGT CGTGCCCCGT
ACTTCTAATT CTCAACTTAC CAACCTATCC CGACCAAACT CTGCCAATCC GCCGACAACA
ACAACCGGCA GCACCGCCAA TGACGGCAGA ACCTCGAAAG AGCTTTCAAG AGCTACATCC
GCCCAGACAT TCAAAGAAAC CAAGGACAAA CGCATCTCTA CCTTCTCCTC TGATGATGCC
CCAGAGAATA AGGAAGCCGC AGTCCTTCGT ACTATGCGTT CACTCGAAGG TACGCATAAG
CACTATACGG ATTCGCAGAG GGAAAAGACG CAAGAGGCGT TTGGAGCTAT TAAGCGGCCT
GCTCCCGAAC CACCTGCCAC TGTTGAGAAA GAAGCGGCGA GGCCGACAAG TCTCGATTCA
GCACAAGCAT TGGCTAATGG CGAGAAAGGG AAGACGGAGA AAGGCGATGA AAGGAGGAGT
CTAGGATTGG ACAGAACTGG CTTTGCCCTT GCGAGTGGTA AGGAGAAGAT TAATGAAGAG
AAGAAGATAC AGAAACCTAT GGCACCCCCT ATGTCACCGC GTGAGTACCT TCAATTGACT
CCTTCAGAAC ATAAACATTG ACCAACGCAA TCTTTGTATT AAAGCCCGAG AAAAATGTGC
CAGCACTTTG TGTGTGCCAA CTCCGTCTCC ACAAAAGACC AGACGACAAG GTGTCAGCCC
ACGCACCGAG ATTGATGCTA CCACAGGCAA AGTATTCCCC GCTTCAGATG ATGAGTCACC
TTTGGCTGAG TTGAGGGACA AAATCATTGT TTCGGACCAG GAGAAGCTTG TGAGGTTTAG
GCGAGTTTCA GACAGTGCGA CAGAGTTGGG ACGTGGAGAT GATGTTGTGG AGACTTTGAA
AGAGTCGACT GTGCTCATCC GGAATGCCCA TGCCCACGCC CATCCTGGCC AACCGGCGTC
GAGAGCAGCT ACGCCTGTCG AGATACACCA AGCCCGTTGC AGTGCGGAGA TCAAGTCTGC
TCCCGACGTT TCTAAGCGAA CATCTCAAGA TTCGACTGCT TCCCGTTCTG CCTCCGCCTC
AGGTTTGACA CGTACGAAAT CCATTGAAGC CCTTGCTATG GACAACCGGT TGGACAAAAT
GGCTTCCTGG ATAAAAAATG TTGAAACAAT CATTGAAGAC GCGCGTAAAG CCGTTGCCGA
AGGCCGTGAG CCCGGCTTAC CCGTCCTCTC CCTCCCGGCC GAACTCACCA CTGCCGATCC
ATCCACGAGC AGTAGTGTCA TTCAAGCAAC GGTCGTCCAT CGCTTTGGTG TGACCCCAGA
TAAAGCTACC GCTATCCCAT CGCACCTGCG CACAAGCTCT GTTCAGGTGG AACCTGCTAC
CCCGCCCAGA TGGATGACAT ATGCAGAAGC GGAAGAGAAG ATTCAAGCTG CTAATGCTTG
GTTGGAAGAG CAGCAGCAGG GGAGGAGGAA AAAGGAGAGA CCGACGGTGG GGCATGTTTT
GAAGTTGTTT GGGGGGGAAA AGGAGAAGGC CGGGTCGAGG TCTAGTACAC GTAAGTCCTC
ATTCACTTTG AAAGTGTAAT TATTGTTGAT GACAATTATA TTTTATCTTA TAGCCGATCC
GAACCATCAA CTTGTATCAC TCAAGCCCCC AGCGCAGACC CTTCGCGGCG TGCCGTCTAC
CCCCGCTCTT CGCGGGTCCA TCTCTGGAGC CGCAGCCGCT GCAGCAAGGC AGAGCAAGAT
GCCACACCGC AAATCTGAAT CCAATCTCCG CAACTTTAAT ACAATGCCCA TGACTTCTTC
TCCCAATTTT GTCGCTGGAC CTCAATACGA TCCTGATGCC GACGAGGATC ATGACACCGC
TGCCCAACAC AACAATAACA GAACCCGATC CGACACTAAT ACCATTGCGT ACGCCTCCCC
TCGTCGAGTT CGATACGAGA CTCTGCTCTC TGGAGAACCA GGCGTGACCA AACAAGGCGC
AGGATGGACG AGCAGTAATA TCAACGTTCC ATCGTATCAG CGAAAAGGAG TGAAACCCTC
ATCATCTATG GCTTCGCTAC GCGAACGGGC GAGGGCGTTG TTGGGCGATT CAAGAGAAAG
GGAGAGACAT ATCGTTGACC TCTCCAGAAA ACCTGCCTCG AGCGTGGACG GTCATGCTCA
AGGATCTGGG GCAGGAGCAG GTGCGAGGGA AAGTTTGAAA GTGGAAAGAC GGTCGTCAAG
ATTGACTCTG AGAGGAGAAA AGGGTGTGAA GAAAGAAACC GCCAATAATG CCGCTTCTAA
CAGCAATACC GAGCATCCTG CTAGACCGAA TACGCCCGCT GCGGAGAGTG TGTTTGGTAT
GAGGAGTGGT ACAGCTGGTG GTGACAAGAA GATGAAGGGA TGGGTGAAGA GCTTGAAGGG
TGCCATGGGA ATGGGCAAGG CTTAA
|
|---|
| Protein sequence | MAQPVLRKSK SNLRQRLGLA VAASRPTHLS PIASPSTANL ASSTSTMASA ISRTDSRSAF
TYDSATPSPP TKQMDFDTVS YNSAMSASPG EYTEKDDMSA STLVSSENAH QQQQLTQQIT
HTEPYQPPTQ FHPPGEDTLH PNIATVTSGA DDIFSLTDQQ LSDRFTFISE IGFGNWGSVW
LCKPKHARSS QLSEPGGVVK LGKQAAASGG SGAGGKVAIK LVHRSKTATT AARVRALWGE
MKIIRALRHE PHPSIIQFES FVITPSYALV IMPHLSHLIP VCLPPSRATP YFRQLASAVG
YLHERGITHN DIKPANVLLS HNDIPVLVDF GFAQKWDVGA RGSFLSSISW GTPEYLDPQR
AKGMPHDERA SDVWSLGITM FEILIGRTPF EADDQEQFST PEELVIYYER TRKGQWVGQW
SIPSGIETLL RQMINPDPVY RVTAMEAYHH PALQPEAPSV IITPHFVRAA ASFDVEEPLP
APPAQTHAAE DHTLAKDDRE KEKEKRKSKR KAKRDDATSH EPRSHFRSTT PALGESIKQH
TSVSKPKRDC DDLGSRVGSG IGSGKENEHM EVGGGKEKEK EKKQSKLVIK KLRMEEEGHD
KDAGEDPTHK KVVPRTSNSQ LTNLSRPNSA NPPTTTTGST ANDGRTSKEL SRATSAQTFK
ETKDKRISTF SSDDAPENKE AAVLRTMRSL EGTHKHYTDS QREKTQEAFG AIKRPAPEPP
ATVEKEAARP TSLDSAQALA NGEKGKTEKG DERRSLGLDR TGFALASGKE KINEEKKIQK
PMAPPMSPRK VFPASDDESP LAELRDKIIV SDQEKLVRFR RVSDSATELG RGDDVVETLK
ESTVLIRNAH AHAHPGQPAS RAATPVEIHQ ARCSAEIKSA PDVSKRTSQD STASRSASAS
GLTRTKSIEA LAMDNRLDKM ASWIKNVETI IEDARKAVAE GREPGLPVLS LPAELTTADP
STSSSVIQAT VVHRFGVTPD KATAIPSHLR TSSVQVEPAT PPRWMTYAEA EEKIQAANAW
LEEQQQGRRK KERPTVGHVL KLFGGEKEKA GSRSSTPDPN HQLVSLKPPA QTLRGVPSTP
ALRGSISGAA AAAARQSKMP HRKSESNLRN FNTMPMTSSP NFVAGPQYDP DADEDHDTAA
QHNNNRTRSD TNTIAYASPR RVRYETLLSG EPGVTKQGAG WTSSNINVPS YQRKGVKPSS
SMASLRERAR ALLGDSRERE RHIVDLSRKP ASSVDGHAQG SGAGAGARES LKVERRSSRL
TLRGEKGVKK ETANNAASNS NTEHPARPNT PAAESVFGMR SGTAGGDKKM KGWVKSLKGA
MGMGKA
|
|---|
| |