| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNN00170 |
|---|
| Symbol | |
|---|
| ID | 3255342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006683 |
|---|
| Strand | + |
|---|
| Start bp | 69030 |
|---|
| End bp | 72826 |
|---|
| Gene Length | 3797 bp |
|---|
| Protein Length | 986 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638254432 |
|---|
| Product | nuclear localization sequence binding protein, putative |
|---|
| Protein accession | XP_568525 |
|---|
| Protein GI | 58262230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.479397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AACAATCCCC GCTGCTCAAC TAATCATAGA CCATCTCCCA AATGGCAGAC AACCCAGTCT
TACAGGCGCT CCAGACCCTT TATCACGATC CGGATACCGC AGCGAAGAGG AGAGCAAATG
AATGGCTCCA AGAATTTCAA CATAGTGTGC GTTCGGGCCT AAAGTCAAAG AGAGCGCAGT
GACAACAAGT GCTTATAAAT TATACATAGA CTGAAGCATG GCAGACTGCA CATGTTCTAC
TCAACGCCCC TGATTCGCCA TTAGAAGGGA GGTTATTCTC TGCTCAGACA TTGCGTGCCA
AAGTATGTTC CTTTATCCTT ATTCCTAAGA CTTAACGCTG ACAGTCATCT TTTTGCAAGA
TCACATACGA CCTCTCCCAA CTCCCACGCG AATCCCTACC ACCCCTCCGC GACTCCCTGC
TTAACATCCT CCTACCCCTC TCCTCCTCTT CTGCCCCGAC CGGCTCCAAA GCTGTCCTTC
TTCAACTATG TCTCGCCATC TCCGACCTTG CTCTCCAAAT GCCCGAATGG GAAAATGTCG
TACCCAACAT GATTGAGAGG TTTGGGACGG ACCCAGGGAC GGTGACAGTG TTACTGTTGT
TTTTGAAGAC ATTGCCGGAG GAAGCGACGA ATCCGAGGAT ACCGCTCGCG CAAGATGAGG
CGAGGGCGAT TCTGAATCGG TTGGTTAGTG GCTCGGCGGG GAGGGTCTTG GAGGTCTTGA
CAATGTATAT CCAAGCCGAG GGTAACGTTT TCATTATTTA TTGTTTCTAA ATATCACCTT
CGCTGACGCT TAACAGGCGT GACAACGTCT ATCCAAATAT CCGTATTCGA AGCTCTCCGA
AGCTGGCTTC AAGCCGGCGA AGTGACCGCT TCCCAAGTCG CCGCAACCCC CCTCTTCTCG
GCCGCTCTCT CCGCCCTCGC TTCTGATCAG CTATTCGACG CTGCTGTTGA CGTCCTGTGT
GATCTCATCC ATGAAACTCA GGAATTAAAC GACAATATGA CTGTCGTCCA AGAAATTATT
CCGAGGGTGA TTGCTTTACG GGGAGAAGTG GAGAGGTATA AGGATGACCC GGATAGGGTG
AGGGGATACT GTAGGATACT CTGTGAGGCG GGAGAGTGTT ATCAAAGCCT AATCGTCCAG
CACCCAGGGG ACTTGTTACC CCTCGTCCAA GCTATCGCCG AATGCGCCGC CTACCCTGAC
CTCGATATTG TACCCATCAC ATTTTACTTC TGGTACGCCC TCTCCGAATC TCTCGAACGT
CAAGAAAACT TCTCCCAAAA TCCTGCTTAC TCACCCATTC TCTCCATCTT CTCCGACCTC
CAATCCATCA TCATTTCTCA CCTCCACTTC CCGCCCGACG ACGAACAACA AACCGCGCAA
GAACGCGATG AATTCCGTAC ATTCCGACAC CGGATGGGCG ATACCCTCAA AGACTGCTGC
CACGTCCTCG GCGCCACAGT ATGCCTCAAA AAATCATACG ACCTCATCCT CTCCGCGCTC
TCTCAACCAT CCCCCTCATG GCAAGCGATC GAAGCACCCC TCTTCTCCAT GCGATCCATG
GGTGCCGAAG TGGATCCTAA CGACGATGAA GTCCTCCCAC ACATCATGGC CCTCCTTCCA
ACCCTCCCGC AACATCCTAA AATCAGGTAT GCGTCCATCC TTGTCATCTC TCGCTACTCA
CCATGGCTCA ACCGACACCC CGAACATCTC ACATTCACCT TATCCTACGT GTCGGCAGGG
TTTGAAATGG CGGACGAACA AGTTTCCGCC GCGGCAGCCC ATGCGATGAA GTTTATCTGC
CAAGACTGCA CGACTCATCT TGTCCCCTTT TTGCCCCAGC TCCACACGTT TATGGAGAGT
ATAGGCGAGA GGCTGGGGCA AGAGGATGTG GTGGAAGTCT GCGAAGCCAT CGCGTACATT
ATCGACGGTA TGCTCCCTGC TGAAGCAGCT TCTGCGCTTT TGCAATTCTG TTCCCCCCTC
ATCACCCGTA TCCAAACTCT CCTCTCGCTC TCCCCCTCTG CTCCCACCTC CTCGGTATCA
GTGTCGGAGG GTGACCTCGA AAAAGTCTCA GACACCCTTG AACAAATAGA TGCATACCTG
TCTATCGTCC GTACCCTCTC CCCATTCCCT CCTTCATGCT ACTCAACCGC TGAAAGGGTA
TATGCGATAT TGGATGTGTT GTTGGAGAAT TTTGGAGGGG TGTATCATGT CTCGGAGAAG
GTGGGGTCTG TATTGAGGAG AGGTTTGATT TTTTTCCCGG CTGAGGTGCT TGTCGGGGCT
GGGGCCGGAG CTGAAGGCGA AAGCGGAGGG AGAAGAGGGG AAGAAGGAGG AATGGTGTCC
CAACTGATCA AGCGGATGCA AACAAGCTTT GAAGAAACGG GGTACGCTAG TTATTTATGG
ATAATGGGTA AAGTGGTAGA CAAATTTGGC GATATGGTCC TGTCTTCCAC CTCGAGAGGA
GAAACAGACG GAGCCGGGAG AATGGTAGGA GAGTTGTTGG GGAGAGCGTT TGAAGGTGTG
ACAACTTCTC TTGGGAGGTT GTTGGAAAGG AAAGTTGCCG TTGAGATACC CGACGGTAGG
TCTTTTTTTT TTTTCTTCCC TTTCCCTCTC GCCCTCCTCA ACCCCAGCCT CAGTCCCTTG
GAAGAACAAA AGCTAACTAC CCTTTCTCTC TCCCAACACC CCTCCTCTAC CCCTACCTTC
CTGAAAAATC TGGGAAAAAA CAGTGCTGGA CGATTACGTC CACCTCTTCC TCTCATACCT
CATCCACCTT CCGCCAATCC TAGCTTCCCC TTTGCTTCCC CTCGCACTCT CGCATACCCT
TCAAGCTCTT ACTTGTCCAG CGACAAGCAT CATTCTCACT TCGCTCGACG TCCTCGCCCT
TCTTTCTTCC CATCTATCCC CTTCCCCTTC CCCGTCCGCC ACGTCCACTT CCTCCTCTCG
CCCATCGACG CCGAAAAACC CAACAGCAGT CCGCCCGATG TTCGCTCAGT ACGCCCGCCC
CACACTCTCC CTCCTCCTTA AGGGCCTCAT TGCCGATTTC CCGGATGAAG CTTCCGAACC
CATCGGCCAA GTCCTCGTGC ATTTTGCGAT AGCGTTTGGT GGTAGTGGGG GGGAGATGGA
GGCGTGGGTG AGGGAGGCGT TGGCTGGTGT GGGTGGGCAT TTGGTGCTGC CGGCTGATAA
AGAGGCATTT TTGGGGCATA TTCATGAGTA CGTCTCTCTT CTCCCTCCCC TCCTCTTCCA
TATCCCATTA TATCTCATGG TAGAGAGACG AAGAAAATGC TAACTTGTTT TCTGCCTAAC
TTATCTCCCA GATGCATCGC CAACGGTCAG CCGGAAAAGA TCAAGTACGC TTTACACGGT
TTGTTAAGAG CTGCAAGGCG GATGAGAGAG AGAGGAAGAC AGAGTAGGAA AAGTCTTGGA
GCGGTATAAT TCTGCAACCC AGAATCCCTT ATCTTCTTCG CTTCGGACTC TGCGCATGCT
CGCTTGTATC CGGGGTTGTG TGCTGGGATC GAGTTGGGGA GAGATTATGG GTGTCAGACA
GAGGGAAAAG GGGGAAAGGG GGAATGGGGA ATGGGGGAGC ACGGATAGAC GGTAATAGGA
CAAAAAAAAA TCAGTGGAGT GTAGAATAAA GAAATCAACT TTCCAGATAT CTCTTTTTAG
CAATCAGCAT GGGTGGATGG TAATAAGCAT GGACAGATGG TACTTTTGTC ATAATCTTGG
GCTGGTTAGA GCCTGGTGAG GGGAGGAGGG ATATAGAATG TCGAGCAGGG AGGGAGAGGA
AGAGGAAAAT GCATGCA
|
|---|
| Protein sequence | MADNPVLQAL QTLYHDPDTA AKRRANEWLQ EFQHSTEAWQ TAHVLLNAPD SPLEGRLFSA
QTLRAKITYD LSQLPRESLP PLRDSLLNIL LPLSSSSAPT GSKAVLLQLC LAISDLALQM
PEWENVVPNM IERFGTDPGT VTVLLLFLKT LPEEATNPRI PLAQDEARAI LNRLVSGSAG
RVLEVLTMYI QAEGVTTSIQ ISVFEALRSW LQAGEVTASQ VAATPLFSAA LSALASDQLF
DAAVDVLCDL IHETQELNDN MTVVQEIIPR VIALRGEVER YKDDPDRVRG YCRILCEAGE
CYQSLIVQHP GDLLPLVQAI AECAAYPDLD IVPITFYFWY ALSESLERQE NFSQNPAYSP
ILSIFSDLQS IIISHLHFPP DDEQQTAQER DEFRTFRHRM GDTLKDCCHV LGATVCLKKS
YDLILSALSQ PSPSWQAIEA PLFSMRSMGA EVDPNDDEVL PHIMALLPTL PQHPKIRYAS
ILVISRYSPW LNRHPEHLTF TLSYVSAGFE MADEQVSAAA AHAMKFICQD CTTHLVPFLP
QLHTFMESIG ERLGQEDVVE VCEAIAYIID GMLPAEAASA LLQFCSPLIT RIQTLLSLSP
SAPTSSVSVS EGDLEKVSDT LEQIDAYLSI VRTLSPFPPS CYSTAERVYA ILDVLLENFG
GVYHVSEKVG SVLRRGLIFF PAEVLVGAGA GAEGESGGRR GEEGGMVSQL IKRMQTSFEE
TGYASYLWIM GKVVDKFGDM VLSSTSRGET DGAGRMVGEL LGRAFEGVTT SLGRLLERKV
AVEIPDVLDD YVHLFLSYLI HLPPILASPL LPLALSHTLQ ALTCPATSII LTSLDVLALL
SSHLSPSPSP SATSTSSSRP STPKNPTAVR PMFAQYARPT LSLLLKGLIA DFPDEASEPI
GQVLVHFAIA FGGSGGEMEA WVREALAGVG GHLVLPADKE AFLGHIHECI ANGQPEKIKY
ALHGLLRAAR RMRERGRQSR KSLGAV
|
|---|
| |