Gene CNN00140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN00140 
Symbol 
ID3255537 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand
Start bp48855 
End bp51385 
Gene Length2531 bp 
Protein Length602 aa 
Translation table 
GC content52% 
IMG OID638254429 
Producthydrolase, putative 
Protein accessionXP_568522 
Protein GI58262224 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.207981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAGGAAAGC GCCCCATCAC CTGCATTTAC CTCCTCTCTC ATCCTTTCAT ACGCTATCGC 
CCCCAGATGA TTCCCCCGCT CGACGACTCG TCCCTGGTGA AGGCCGCGGA TAAAGCCTGG
TGGAAGTCAG CGACCGTCTA TCAAGGTTGG TTCCATCCGA TTCCGGGCTG TTGTGACAGG
ACTGATGTTT CCGCTTTCGT CAGTCTATCC TGTAAGCCTT GCTTGATATT AGCCGTATGA
TATAGTACCA ATCTTCTCAT TTATCTCTCT TTTTTCTTCC CAGGCATCAT TCTGTGACCA
TGCCGATGCA GGCCACGGCA CCCTCCTCGG CATCCTCACC AAGGTGGACT ACCTGCAATC
ACTGGGAGTC GACATCGTTT GGCTTTCTCC TATATACGAG TCCCCCCAGG CAGATATGGG
GTTAGTTTAC CGCTCTATTC TTTTCTCTGG GTCATGGCTG ATTCGTCATC GCAGCTATGA
CATTTCTAAC TACCGTCAGA TCGATAAGCG GTACGGCTCG CTTGAGGATT GGGATAGACT
ACTGGCTGCG CTTCACCAAC GAGGCATGAA ACTTGTTATG GACTTGGTTG TGAACCACAC
CTCAGATCAG GTAATGTTGG GGAGGCTTGC CTATCTATAA ATGTTGATGT CCCTTACTTT
GTAGCACCCA TGGTTCAAAG AGTCGCGCAG TTCCCGAGAC AATCCCAAGA GGGATTGGTA
CATTTGGCGG CCACCTCGAT ACAATGAGAA GAACGAGAGG ATCCCCCCGA ATAACTGGAA
AGGCACTTTC GGCCAGTGAG TCACTATTAC CACCGTTCTT GCGGTTTCAT CTCAGCACGA
AGACGTTGAC GTCGAATTAG GGGATCAGCG TGGGAATTCG ACGAGACCAC CAACGAGTAC
TACCTCCATC TCTTCCTCAA GGAACAGCCC GACCTTAACT GGGAGAACCC TCAGGTCAGG
GCCGAGGTTT ATGATCTTAT GCACTGGTGG CTCAAGAGGG GTGCCGATGG GTTCCGTATG
GACGTAGTAA GTTTGGTTCT ACGGCTTGGA ACTGGATTTG ACTAGGATCA GATCAACTTT
ATCGCCAAGG CACCCGGTCT GCCAGATGCG CCGGTCATCG ACCCGGGACG GACGTATCAG
TCGTTTGGGA TGATGTCGAT AAACCGTCCA GAGGTGCATG GATGGCTGAA AGAAATGAAT
CGCGCGGTAC TCTCACACTA TGATTGCTTC GCGTGAGTTC CTCCAACCTG TTTGATATCC
ACAGCGCTGA TCTCTGTAAA GCGTGGGAGA ATGTCCAGGT GACGAGGCCG TAGTGTCATA
TGCCCCTTAT TCTGTGCCCC ACAATAAGGA GCTACAGATG GTCTTTCATT TTCACCAGTA
TGTTGCCTCC TTACTTCTTG CCATCGCTTT CCCTGAGTAA GGTTCGGTAT CTAGTCAGAG
CTTCGATAGG GCGGCTGGCG GGCTGGGACG AGTTCACAAT CCTGATTGGA AGCTGTCCGA
GTTGAAAAGG GTCTTCAACA CCTGGCAGAT CGAGATGGCA CGTGAAGGTG GTTGGAATAG
CAACTATTGA GTCTTTTCTC ACTACCCTAA CAAGCGAATC TGACCACGGT CGCAGTCTTG
AGAATCACGA CCAGCCTCGG ATCATCTCCC GGATGGCATC TGACCATCCT TCGGACAGGG
CACGGTGTGC GAAGCTATTG GCGATGTTCC ATTGCTCCCT TGGCGGTACA ATATACGTTT
ATCAAGGGCA GGAGCTCGGG ATGATCAATG TTCCGCGTGG CTGGGGACTG GTGGAGTACA
AAGATGTCGA GACTATTCAA AACTCTGAGG CCGAGGTGCA GCATCGACAA GTGATATGCG
GCCATGCGAA TCCGGACATA TCCGACTTGC TTGAGAGCAA CCGCATTACA GCTAGGGACA
ACGGTCGCAC TCCCATGCAG GTGGGTGTCG GAGATGAGAC GATGTTATTG GAGCGACTAA
TGGAGAAGTT CGGTAGTGGG ACTCAAGTCT GAATGCCGGG TTCTCAAAGG GCGAGCCGTG
GATGCGTATA CACGATGACT ACCGCGAGGG CTGGAACGCT GCCGCTCAGG TTAATGATCC
GGACTCGGCA TGGTCTTTCT GGAAGCAGAT GCTCCGCCTG AGAAAGAAGT ACGACGCCAT
GATATACGGT AAGCACAAGC CATCCCCCTT TGATTCGGAA GGTACGATTA ACCACCCTGC
AACTCAAGGC GACTTCATCG CGCTGGACGA GTCGAACGAG GAAACTTACG CATATATCCG
CGAGCACCCT CCGAGCGGGC AGAAGCTCCT CGTCGTCCTC AATCTTTCCC GCGGAAATGA
CGGTCGTGGT GCACCCTCGA CTTTTGTGCT CCCATGCGGG CTCGATACAA GCGGCAGCAA
GCTATTGATC TCTAATGGCG AGGTACAAGA GGGCCAGCGA ATCGAGGGGA ATATACTTTT
GGGCCCATGG GAAGGCAGGA TCTACCTCTT ATGACGAACC TATCATTATT CAATAGAGCT
GCATCATGAA G
 
Protein sequence
MIPPLDDSSL VKAADKAWWK SATVYQVYPA SFCDHADAGH GTLLGILTKV DYLQSLGVDI 
VWLSPIYESP QADMGYDISN YRQIDKRYGS LEDWDRLLAA LHQRGMKLVM DLVVNHTSDQ
HPWFKESRSS RDNPKRDWYI WRPPRYNEKN ERIPPNNWKG TFGQGSAWEF DETTNEYYLH
LFLKEQPDLN WENPQVRAEV YDLMHWWLKR GADGFRMDVI NFIAKAPGLP DAPVIDPGRT
YQSFGMMSIN RPEVHGWLKE MNRAVLSHYD CFAVGECPGD EAVVSYAPYS VPHNKELQMV
FHFHHQSFDR AAGGLGRVHN PDWKLSELKR VFNTWQIEMA REGGWNSNYL ENHDQPRIIS
RMASDHPSDR ARCAKLLAMF HCSLGGTIYV YQGQELGMIN VPRGWGLVEY KDVETIQNSE
AEVQHRQVIC GHANPDISDL LESNRITARD NGRTPMQWDS SLNAGFSKGE PWMRIHDDYR
EGWNAAAQVN DPDSAWSFWK QMLRLRKKYD AMIYGDFIAL DESNEETYAY IREHPPSGQK
LLVVLNLSRG NDGRGAPSTF VLPCGLDTSG SKLLISNGEV QEGQRIEGNI LLGPWEGRIY
LL