Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNN00040 |
Symbol | |
ID | 3255317 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006683 |
Strand | + |
Start bp | 10535 |
End bp | 12981 |
Gene Length | 2447 bp |
Protein Length | 520 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254419 |
Product | expressed protein |
Protein accession | XP_568512 |
Protein GI | 58262204 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCTATTCGGG CCTGGCTATT CGGGCCTGGT CCGCCATCAA GCGGCTATTC CTTATACGGG CAGCCATAAT TTTCCCTTCA GTACAGGATG TAGGAAATGA CCCAACTGCG GTGCCGGTGC GCCGCCCTCT CGAACAGGGG CGATCAGTCG GCTGGCGCGA TAACGACGGA AATCTGGCTT GGCTAGCTAT ATAAAAGTCA AGAAGCAGAG CCGGCCCTTG TCGACCCCAT GTCATCCACT TTTCCTCTAC AACCTCCTCC GCATTTTTAT ATTTTACGCC AACAATGTCC GACCCATCGC AAAGGATTTT AATCGTAGGC GCTGGGGTCT TTGGTCTCAG TACTGCTCTG TTCCTTGCTC GACGAGGTGT GTTTGGCGTA TCTAAGGCGG ATGAGTCTGC ATGCTGACAT TGTATCACTT AGGTTACAAA GACGTCACTG TCATTGATAG GATTTCATTG GAAGTCAACC AGTACCGCCC AGATGCTGGT TGTGACGGGG CTTCCGCCGA TATCAACAAG GTCTTCCGAA CAGGCTACGG CGTTCGCCAC ATGTGAGCTT TTAATGATCA CATGCCACTG TGGAGCTAAT GGGCCTCAAT AGGTACGAGA AGCTCGCTTT TCAAGCTCTT CCCGTTTGGC AAGAATGGAA TGCGACTATC AGGAACTCCT CTCCTGAGGA GTTGCCCACC GGTCTTACTC CTGACGATGA TCTGCTCGTT CAGTGCGGGG TGATGCGTCT GGGAGAAGGC AAAGAGCTTG ACGATTACCA TGCGCAATGC TTACAGGGAG CCATTGAGGA GGGACACCGG GACGACGTCT ATCTCATCGT GAGTCCAAAC GTCTTTTCGT AGTTACGCCT CAGTGTGCTG ACGCGACCTC AGAATGATGC CCATGACTTG GCTCGAGCAG CTCAGAAGGA CAAAAATTCT CCCGGGATGC ATTGGGCCTC CAAGCTTCAA CGTTACGGAG TATTAATAGG GGGCAATATC CACGGTATGC TTGATATGGA AGGCGGTTTT ACTCGAGCCG ATAAGGTACG TTATGTAGCA CGCTTCTTTT GCAAAACATG GTTCTACATT GGCTGATTTC GTACCCTAGT CTTGTCTTTA TGCCCTGCAC CTTTGCAAGA AGGCCGGAGT CAAATTCATC CTTGACCAGA AAAACGGTGC ATTCGACAAA TTCATCCATG AAGGTAAGAC TATACTGGGT GTAGTTACCA AGGATGGCAA AGAGCATCGA GCAGACAAGA CCATTGTCGC TGCTGGAGGG TGGACCGCTT CTATTGTTCC AGAGGTCAGC AGTCTGCTTG AAACCACCGC CGGTTCTCTG TGTTTTATCG ATATCCCGGA AAACCGTCCC GACCTTCGCA AGAAATATAG CCCTGCTGAA TTCTGTGGCT GGAGCTTGAA ACTAAAGGCC GACCCGGGAG ATCATGAGTA AGTTCGAGTC ATACGTGCTT GCTTCTCCAT AAGCTGAATT TGCTTTAGGG GCTCTTACAG GTCTATGGGT GGTTTCGTAA GTTGCATGTC CTATGCCATG TTAAAGAGAC TTTGCTAATG CCCCTTCTAG CCTGCAGACC CCAATGGCCG ACTCAAGTTC GGCTTCCGAG CTACTAAATT TACCAATTAC GAGACCCTTC CAAACGGGCA GTGAGTGACT GGCCATTCTA TCAATTCCAA ATGGCGCTTA CGATCATCCT TATCCTACAG GAAAATTTCC GTCCCCCGCA CTGCCTTTAC CGAGAAAAAT ATAGACAACA TCCCCAAGAA GGCCTTGGAT GCGATCAAGA GCAACATCAT GGCCTTGTAT CCCGATCTCG CCGAGTTTGG GCTGACTGGT ACGAGGGTGA GTAGTTGGAA CATGGTAGAT CTGACGATGG CTGACATCCG GCTAGATGTG CTGGTACACA GACTCCATTG ACTGCCATTT CCTTGCTGAC TATGTGCCTG ATACGAACGA ATCCTTGTTT GTGAGTATAC ATCTTAAGCT GTTAATGATC GGGCCATTAA CATGCTAGAT AGATCGCTAG CGGAGGCTCA GGTCATGGAT TCAAGTTCTT GCCCATTTTT GGAGAGGTAA GTGCGATGTC CGACCATTTA TAGATCCTGC TGATCCCTTT GCCCTTTAGA ATTTCGTCAA TCAACTCGAA AAGAAAGGAG ATGAGTTTAC CCAGTACTGG AAGTGGCGCA GCGCAATTCC CGGAGAAAGT GCCAATGGCC TTGAGGAAGG ACCAGATGGT CCCAGAACTT TGGATAAGGC TGCTTTGGCT ACACGGGCGG ATTGGAAGTT TGATACGGAT AGGATAGTTG ACAAGCCTGC CACGTGCAGG GCGGATTGCA AGTTTGATAC CGATGGGGTC GTTGACAAGC TTGCGGAGTG CACTGTGTAA AACTGGTACC TTTGGCGGGA ACATACCAAA TTTGTAGAAT TACATCCTCG ATGAAAA
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Protein sequence | MSDPSQRILI VGAGVFGLST ALFLARRGYK DVTVIDRISL EVNQYRPDAG CDGASADINK VFRTGYGVRH MYEKLAFQAL PVWQEWNATI RNSSPEELPT GLTPDDDLLV QCGVMRLGEG KELDDYHAQC LQGAIEEGHR DDVYLINDAH DLARAAQKDK NSPGMHWASK LQRYGVLIGG NIHGMLDMEG GFTRADKSCL YALHLCKKAG VKFILDQKNG AFDKFIHEGK TILGVVTKDG KEHRADKTIV AAGGWTASIV PEVSSLLETT AGSLCFIDIP ENRPDLRKKY SPAEFCGWSL KLKADPGDHE GSYRSMGGFP ADPNGRLKFG FRATKFTNYE TLPNGQKISV PRTAFTEKNI DNIPKKALDA IKSNIMALYP DLAEFGLTGT RMCWYTDSID CHFLADYVPD TNESLFIASG GSGHGFKFLP IFGENFVNQL EKKGDEFTQY WKWRSAIPGE SANGLEEGPD GPRTLDKAAL ATRADWKFDT DRIVDKPATC RADCKFDTDG VVDKLAECTV
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