Gene CNM01820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM01820 
Symbol 
ID3255238 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp552855 
End bp556340 
Gene Length3486 bp 
Protein Length989 aa 
Translation table 
GC content50% 
IMG OID638254336 
ProductDNA unwinding-related protein, putative 
Protein accessionXP_568304 
Protein GI58261788 
COG category[L] Replication, recombination and repair 
COG ID[COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.414806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCATCTCCCC ACACCATCCT CAGCGGCATG TCTTCCCCAA ACGCAGGTCG ATCTTCCTCC 
CCACTCCATT TTCCCACCTC ATCCGTAGGC GGTACACCTC GTGCTTCTCG TGTCCAGCAG
CTGTCTGGAT CCGGTGCCCG TGAGTCCCTT GTCTCGCGTC GTCTCGCCCA GTGCTAATCT
TCCTGACTAG CTGCTGCATC ATCCTCTCCT CTTCACTTTC CGACATCTTC ACCTCAAGCG
TCTTCCCGTG CTGCGCGTAC ACCTGGTGGC TTGAGGAGCG ATGTTCCTAG CTCTGCTGCA
GTCAGACGAA TCCGCGATGA AACACCATTG TTCTTCCCTC CGTGGGTCTA TCAAAATCTC
GCCCCATTTT CTGCTGATGT ATAAGTAGTT CCGGAGGATC GACCCCTCGT CGAGCTCGTC
GAGGTGACAT CCACTCCTCT TTCCCGCACT CATCGCCGTC TCTCGCTCGA CGACAAGCCC
AAGTCCCGGC TGACTCTCTT TCGCTCCGTG CGTCTTCCCC TGGTATGGGT ACCGATAGCT
TTGGTACTCC GCGTGTTTTC GGATCGGCTG CCCCTACCCT TTCCGCAGTT GCCCAATCTC
AACTTGGTGC CGACGGCGAC GATATCGATG GTATGGTCAA ATTTATCTGG GGTACGACAA
TCTCTTTGCA AGAGAGCATG AACCTTTTCC GGGATTTTTT GAGAGGCTTC AAACCCAAGT
ACCGTGCTGT GTACAATGCG GAACAATCCA GACATGCTGA GGAGAGTGGC GGCGTTGCGC
CTCCTCCGAT GACTTTGTAC GACAATCTCT CTGCTGAGCG TGCCGAGGTC CCTCTCTATG
AGACGTATCT CAACCGGCTT CGACTCACTG GTGAAACTAA TTTAAACCTC GACGCGCTCA
ATCTGCTCGC GTACCGACCC ACAAAAAAGC TTTACCAGCA ATTGGTCAAC TATCCGCAAG
AAGTGATCCC TATCATGGAT CAGGTCTTGA GGGATGTGAT GATTGAATTG GGTCATGAAG
AGCTGGAGAA AGCGCAGACC AAATTCGCTG AGGGTAACTT ATCTCAGTTG GAATTGAGTT
TGATTACAAA TGAGATTAGA GATGTGGAGT CACGAGTGTA TAAAGTCAGA CCGTTTGGTG
GAGAGAAGAC GGTCAACATG AGGGATCTTA ATCCCGGAGG TGAGTGCCGA CTTTACTTTG
CCTGGACGTG CAACTGATAA TCTGTAGATA CTGACAAGCT GGTGACCGTG AAGGGTCTTG
TCATCCGTGC AACTCCCGTC ATTCCTGATA TGACCACTGG TAAGTAATGC GTATCCAATC
TTGTGAACCT TTTGCTAACT CATCTCAGCT TTCTTCCGAT GCTTGGTTTG TCAGCACACT
GTTCAAGCGG ATATCGACCG AGGAAGAATC AGCGAGCCAG AGCGATGTCC CCGAGACGTC
TGTGGTTCAA CTGGCACTAT GTCTCTTATT CATAACCGCT CCGAATTCAC CGACAAACAA
GTCATCCGTC TTCAGGAGAC TCCCGATGCT GTACCCGATG GGCAGACTCC ACATACTGTA
TCTCTTTGCG TCTATGATGA ACTCGTTGAC TTGGTCAAGC CTGGTGACCG AGTGATCATC
ACTGGTATCT TCCGATCAAT CCCAGTTCGT GTCAACCCTC GCCAAAGGAG TATCAAATCT
TTGTACAAGA CCTATCTCGA TGTCGTCCAC GTCAAGCGTA CCAACACTGC CCGAATGGGC
TTTGACCCTT CTACTCGTGC GGGCGAGAGC AAGCCACCGG GTGTCGGCGT TGGTGGTGAG
GACGACGAAG ATGAACTTCT TGCGCGTCAG GATGGCGATG CTGCGATGGA CGAGGACCTT
GGGTCGCCTG TCAGATCAGC CGCTGCGGAG ATGGAACAAC GCATTATCGA GCTCTCCAAC
CACCCTGATC TTTACAACAT ACTTGCCTCA TCTTTGGCGC CCTCCATCTA CGAGCTCGAA
GATGTTAAGA AGGGCATCCT CCTCCAGCTT TTCGGCGGTA CCAACAAGTC TATCGCCCGT
GGTGGCGGTG GGGGCGGTCC TAGATACAGA GGTGATATCA ACGTGTTGAT GGTTGGTGAT
CCTGGTACTA GTAAATCTCA GATTCTGCAG TATGTGCATA AGATTGCTCC TCGAGGTGTC
TACACCTCCG GTAAGGGAAG TTCAGCGGTT GGTTTGACGG CCTATGTAAC GAGAGATCCC
GATTCCAAGC AGCTCGTTTT GGAAAGGTAA TTTTCATTTG TAAATTGGTG GACTCAAGGC
TAATGACAAT GTAGTGGTGC ATTGGTTTTG TCTGACGGCG GAGTTTGCTG TATCGATGAG
TTTGACAAGA TGAGTGATGC CACTCGAAGT GTCTTGCACG AAGTAATGGT CAGTTCGATG
TCCTTCCCAT ATTTGAAGCC AAATTAACTT ATATAATAGG AGCAACAAAC GGTTTCTATT
GCCAAGGCAG GTATCATCAC CACTCTCAAT GCTCGTACAT CCATTCTCGC CGCCGCGAAC
CCAATCAACT CTCGATATGA CCCTAACCTC CCTATTCCTG CCAACATCGA TCTCCCTCCT
ACATTGATCT CAAGATTCGA CTTGCTGTAC TTGGTGTTGG ACAAGGTGGA TGAGGTGAAC
GACAGAAAGT TGGCAAAGCA TTTGGTGGGA CTCTATTTGT CAGATGTAGA GGATCAGCCT
GCCGACAATA TCATTGTGAG TCTTTTTGTT TCAAGGTGAC CGATCTCAAC TAACAAGTTG
TGCAGCCTCT TCAGACCTTA ACGTCCTACA TTACATATGC CCGCTCCAAA ATCCACCCCG
TCCTCACCGA AGGAGCTTCT GAAGCGCTTG TTCAGGCCTA TGTTGAGATG CGCAAGGCCG
GTATGGACTC TCGTACTCAG GAAAAGAGGA TCACTGCTAC CACTAGGCAG TTGGAAAGTA
TGATCAGATT GGGCGAAGCG CATGCGAGGA TGAGATTAAG TGACAGGGTT GAGGAAGAGG
ACATTAGGGA GGCTGTTAGG TTGATCAAGA GTGCCCTGAG GGAGAGTGCT GTGCGTTTAC
TTTTGTGTCT ATCATTTCTG CATAAAACTG ACTGAATATT CAACAGACCG ATCCCCTTAC
TGGTCAAATT GATCTTGACC TCATCAACAC CGGTGCCGGC CAAACCATGC GTCGCGCCCG
AGCCGATCTT AAACGTGAAG TTATCAAACT CGTCGTCGAA AAGGCCCGAT CTCAGGGTAT
TCGCTGGGCA GCAGTCATTG ATGAGCTCAA CAAACAATCC AGTGTTCCCG TGGATCATGC
ACAGTTCGCA GAAATTGTTA GGGAGCTGGA AGAAGAGAGC ATAGTCAAGG TCATGGGTGA
AAGGGAAAGA AGGATTATCA AGAGTCTGGG TGTATGATTA CTTTGGAGAA TGGGTTTTCT
TTCATTTTTT TCGTCGTGTG GTGTTTGTCC TTGTTCTTCT GTTTGGTACA ATGTTTGCAT
AATATA
 
Protein sequence
MSSPNAGRSS SPLHFPTSSV GGTPRASRVQ QLSGSGAPAA SSSPLHFPTS SPQASSRAAR 
TPGGLRSDVP SSAAVRRIRD ETPLFFPPSG GSTPRRARRG DIHSSFPHSS PSLARRQAQV
PADSLSLRAS SPGMGTDSFG TPRVFGSAAP TLSAVAQSQL GADGDDIDGM VKFIWGTTIS
LQESMNLFRD FLRGFKPKYR AVYNAEQSRH AEESGGVAPP PMTLYDNLSA ERAEVPLYET
YLNRLRLTGE TNLNLDALNL LAYRPTKKLY QQLVNYPQEV IPIMDQVLRD VMIELGHEEL
EKAQTKFAEG NLSQLELSLI TNEIRDVESR VYKVRPFGGE KTVNMRDLNP GDTDKLVTVK
GLVIRATPVI PDMTTAFFRC LVCQHTVQAD IDRGRISEPE RCPRDVCGST GTMSLIHNRS
EFTDKQVIRL QETPDAVPDG QTPHTVSLCV YDELVDLVKP GDRVIITGIF RSIPVRVNPR
QRSIKSLYKT YLDVVHVKRT NTARMGFDPS TRAGESKPPG VGVGGEDDED ELLARQDGDA
AMDEDLGSPV RSAAAEMEQR IIELSNHPDL YNILASSLAP SIYELEDVKK GILLQLFGGT
NKSIARGGGG GGPRYRGDIN VLMVGDPGTS KSQILQYVHK IAPRGVYTSG KGSSAVGLTA
YVTRDPDSKQ LVLESGALVL SDGGVCCIDE FDKMSDATRS VLHEVMEQQT VSIAKAGIIT
TLNARTSILA AANPINSRYD PNLPIPANID LPPTLISRFD LLYLVLDKVD EVNDRKLAKH
LVGLYLSDVE DQPADNIIPL QTLTSYITYA RSKIHPVLTE GASEALVQAY VEMRKAGMDS
RTQEKRITAT TRQLESMIRL GEAHARMRLS DRVEEEDIRE AVRLIKSALR ESATDPLTGQ
IDLDLINTGA GQTMRRARAD LKREVIKLVV EKARSQGIRW AAVIDELNKQ SSVPVDHAQF
AEIVRELEEE SIVKVMGERE RRIIKSLGV