| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM01750 |
|---|
| Symbol | |
|---|
| ID | 3255077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | + |
|---|
| Start bp | 526118 |
|---|
| End bp | 532213 |
|---|
| Gene Length | 6096 bp |
|---|
| Protein Length | 1447 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638254329 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568473 |
|---|
| Protein GI | 58262126 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00329615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGG CTAACAAAGC CCTCCAAGAG GAAGAGCTTG AGAGCTTGAG AGCTATCTAC
CCGGTACGTC TTCCTTTGGG ATCACATCAA AGCTTCAAAA TCTCGTCTTA CGTTGGTATC
TGGTTTTAAA ATGGATAATG CTGATGTTTT ACGTGTGGTA GGACGAATGG CATGATATAC
CACCTACTAA AACAGCTTGG GGGACAGAGG TCGATGCGGG ATGGTGGGAG GTCAAGATCT
GTGCGATGGA GGATGAGAGA GTTAATGTGA TCTTAAAAGG AAAGATGGTT CAGGTAAGGC
AATTGCAACT CTTATCTATA TTCGAATCTC ATTCTAGCCA ACAATGTTGG TAGGCATACC
CTCACCAAGT TCCCCCTTTG CTGCTTCGAG AACCTGAATA TTTGACAGCA AATCATGTGC
AGCAACTGCA CAAAATCATA CAGGACAAGG CGAGGTCCAA AGTAGGAGAG GTCATGATTT
TTGAGGTGAT TTATTTCCTC TATAATGAAT TCAAGTTACA AGATTGACTT TTCCACTAGC
TTATTGATAC AGTGCGAGAC TTCATTTCGG AAAACCACGC GCCATTGCCT AGCCCTGGGG
ATGTGAATCT TATGGAGGAG AAAGCAAGAC GTGAAGAAGC TCAACGAGCT GTAAGTGACA
TACTGAACCC CTCTATCAGC TTGGTCTTAC CATTTGAAAG GCAGAGGAAG CCAGTCGAGC
CACAGAAGCA GAACGTAAGA AAAAAGAATT GGACAAGAAC AATCGATACT TGCATGACCA
GATCCAACTC AACACCATCA AGAAGAAGGA AACCGCAAAC AATGCCAAAT ATCTTGAAGA
AGAGCGCCGC AGGCAAGAGT CTCTTGCCAT GTTGGACATT GGTGATCTAG ACAAGAGGGA
GTTAGAGTTG GATGAAGCGA TTGCAATCGA TGGATGGGAG GGTACTTGGA AATCTTGGAT
ATTATTTGGC GGGAAGAGGG AAACCCTCTG GACGACATAT AGTGCGGAGC CCGATCGCAA
ACATAATTTC AGCCAACGAT CCGACACAAT TTCCTTTGTC AGAGCATCTT CACCCAACGT
CACCGTTCAC ATTGTCGACT TTGCCAACCC ATACTATTCA ACCCCCCTCG GCATCAAACG
AATCGAAGCT TGTACTGTTG AGGCTTTGAG AGCTCAAGGG ACGATGTCGG AGCATGTAGT
GAAGGTTTAT GCGGTCAAGA GAGAGAAGAG TCCAAAGGGA TGGGAGAGAT TGATATTGGT
AACTGAAGGA TTGAGTGATA GTATGAAGTT GAGAAGCTGG ATACCGAAGG AAGGTTTTGG
AGAGGACCTT TCTAAAGTGA GTGTTGCCTC GGAAATCAAT TCCATACAAT GGCTGATACA
ACAGCAGGAA TACATCTCAC AGGCCCTCAT AGGACTTAGT CAGCTGCATC AACGAAACAG
TTGCCAAAAG CGTATGTGTA CTCCTTCCAT CCATTAAAAG TCTCCTAATC TGAGATGCAA
AAGAGCTGGA CCTGGATTTT ACACTTATCT CGACAACTGC CAACGGCGTA AAGGTCATTA
AGCTCGCAGG GACAGGTTAT GCTCGGCGTA TCGTCGATTT GCATCGCTCA AACCCGTTTA
TCAAGAATGT AATTCAAACC GTTCCCGAAG AGTGGTATGT TCCTCCATCT AGTCTTATCT
ATCCGTATGA TGCGATCACT AATGGCAGTA GGTTATCACC CGATGAGCGT GATTCACCGC
ATTCCTATAC TAGGCCAAGA GATATGTGGC ATGTGGGGTT GTTATTGATT CAGATGCTCT
TTGGACCTGA CACTCTGCGG ACGTACCACA GTTTCCCTAC CCTACTTCAG CACGGTGGGT
CCCTTCATAT AACAATGCCG TGGTGGTGCA ATATTCTGAC TTAATGCTTC AGCTCCCAGA
TTGTCGGGCT CAATGACTGA ACTTCTTACA GGCCTACTCC ATCCCAATCC GAAGAAGAGG
TTGACAGCCG ACGAGAGCCT TGCCAAGTTA AGGTCATTCG ACGACGTCAC TCGTCGGGCA
GTCCGAATAA GTAGTGGTAC GTGCTCCTTC TTATGACAGC CATCCTCAGG AATCGGACTG
ACTAGTAGGC TAGCTCCAGG CCACGCTCGA CATCAAAGCA TTCCACAGAG TCCTCAAGCC
TTATTGGGCG TATCTCCCGT CAACAGAAGC CTCTTTAACT TCCTGCCAAA TACCCCCCAG
CCATTGACAC CCAGGTTATC TAGGTACAGA GCGGATTTTG AGGAGGTGGA GTTTCTGGTG
GGTAATCACC GTCTGCGATT GCATATGACC GGTGAAAACA AGCTGACAGA AAACTTTTGG
TAGGGTAAAG GTGGGTTCGG GGAAGTGGTA AAAGCGAGGA ATAAGCTGGA TGGGAGGTTC
TACGCCATCA GTAGGTTCTT TCCTAGGATG AGACTGAGAC TGACAACATG CCACAGAAAA
AGTCAAGCTT CGACCTGAAG ATAATGAGCA GAAGGTTTAT CGTGAAGTTA ACAACCTGTC
TCGTGTGAAT CACCAGCACA TCGTTCGATA CTACGGCTGC TGGCTAGAAG ATGCCAATCC
TCCCGACCTC ACTCCGACTT TGGAAGATTC TGTACACACA GCTTCAACTG CAGGGACAGG
AGCTACCTGT TCAACAGAAG AAGACATCTT CGCAGTCAAC TTTGATGACT TTTCATTGTC
CAGAAGAGAT CAGTCGAGAA GCGCCTCTTT CCCAAGAATC CGATTTACCA ACTCGAATGG
AGATGATGAT GACGATTCGG ACGAAGATGA TTCGAGTGAG GAGGATGACA CCGAGTCGGA
TACTGAATCA GACTCAAGTG CTGCAACGGC CGATCCCTCG GAACCTCGTG GGCGATCTCA
ACCCCAGTCT TCTCTCTTCC AACAAAGGCC TCAAGCACAA TCTCAACGTC AGAGTATTCC
CGGCAAACCG TCGGCTTCAA CATCGGTGAT GACGAGCTCC ACTTCGGATG GAATGGTCAG
GAGGATCTTG TATATTCAAA TGGAGTTTGT TGAGAAAGTA CATCCCTGTC TCTTTCCCAC
TCTCATGAAG ATAAAAGCTA AACCTTGGTG TAGCAAACTC TAAGAGAAGC AATCACTGCC
GGCTTGACAG ACGATGAGGT TTGGAGGTTG TTGAGGCAGG TTTTGTCGGC TCTAGCCCAC
ATGGCGTCGT TGGGTATCGT GCATCGAGGT GCGTTTGTGA CGTTGGAGAG TGCGTGTGCC
TTTACTGATT GTTGAGGACA GATTTAAAGC CCTCCAATAT CTTATTAGGT GAGTTAATAG
AGAGATATGG TGATCATTAC CGCTAATCCC GATATGTAGA TGGAGATGGT AACGTCAAGA
TCGCCGATTT TGGTCTTTCT GTAAGCTATA ACTCAAAGGC TCTTCATTCC CTTGCTAATA
CAGTTGACAG ACGTCTGAGA TGACTGCTAT TGAAACCGCC TCCGGGCCAA TCGCCTCCAC
AATTGACAAC ATAGATCAGA CTTCCAATAT CGGTACTAGC CTGTACATTG CACCGGAAGT
TGCGATTTCG CGATCATACA ATGAGAAGGT CAGTTAATAT AGCCCCTCAA CAAACCCCTG
ACTGATCTAA CGGTATCAGG CGGACATGTA CTCACTCGGT ATCATCTTCT TTGAGATGTG
CTACCCCTTC AAGACGACTA TGGAACGTGT CCACATCCTC ACCGCCGTGC GGCAACCAAG
TATCTCTTTT CCCCCAGGAT GGGGCCCAAA CCACAAACCA AACGAAAGGG AGATTATTCG
GAGATTACTA GCGCACGATC CAGCGGCGAG GTTCAAAGCG ACTGAATTAT TGAGGAGTCC
ATTGTTACCT ACGCCTGAAA AAAGGAAGGA GGATTACGAT GCGGTTATCT TTGGTCGGTT
TGCACGCTTT TCGAACTCCT GCGCTCTCTT GCTGACCAAA ACACGTAGAA CTTACTGACC
CTAAATCATC CCATTACAAC ACCCTCCTTG ATACTCTTTT CGACCGTACT TCTCACAATA
TTGTCGATGT GAACCATCGC TTGGTTGACT ATACCTATGA CAACGATTCT GATGATCAGC
TTCAAGTCTG GCTGACCGTT GTCATACAGC GTCTTGTTGA CCTCTTCCAG CGACATGGTG
CTGTCGAAAC CTATCTGCCT CTGCTCATCC CCGAGACGAC ACTGCTTGAT GCTTTTCCTA
ATTTGGATCC AGTCAGATTG ATAGAAAAGA GCGGACAGGT AGTGCAGTTA CCAAGCAGTG
ATGTCCTTGC TATGGGACGA AGTGCCACAA GGAGGCAGAT AGAAAGAATC AAGAGATACC
ACGTAGGAAG GAAGTACACA GAGCACCAAC TTGGTGGTCA GCCGGTGATC TCAGGACTAC
TCAGGTGAGT ACATAATATT GCGTGTTCTT TCAGCAGACC TGTCTCACTT TATAACAGTT
TTGATATTGT GTCACCTATC CGTTCTGCAG CGGCGGAAGC AGAATGCCTT GAGGTGGTGG
ACAAAGTCAT TTCGGAATTC CGTGGTATGC GAGGGACATC TTCAGTGGAG TACGAGTTCC
ATGTCAGCCA TGAAACAGGT GAGCTCCTTG CTATATTCTT CAAGCACACG CTGACACGTA
TCAGTGCTCG ACGCTATTCT AGACATAATA CCAGACCGTC CAGATAAACC TCGATTGAAA
GTCTTAGAGC AATTCAGAAA CCTTGGTGCT AGTAACAGCG CAAACCCTTC TGCACAGTCG
AGGAATCTGT TGAGCAATGT TACCGGTCTA TCGAGGATAT TAATGGATGA GTTGGAGCAG
TGTTGCATAG CAGGTGAGTT GTTCGATGGT TCATACTGTG TTAAATACTT ATGTTGTGAA
CAGGTGATTT CGAAGTAGTT CGCAAGAGAT TAGAAAGCAT CTTCACTTCA ACTAGTGCTA
AGAGAAAACT AGATACTGCT CTAGATGATA TGGCCAACGT TATCAATTCT GCTAGAGCAT
GCGGAGTGGC GAGGAAGATT CTTTTCCGGC CAACTCTTGC AAAGCACAGC GAGTTCTTCC
GCGGAGGGTT TATGTTTGAG TGCGTGAGGA AAGGGAAGCA AAAGGATGTT GTAGCATACG
GAGGACGGTG AGCATTACAT CCGCTTATGA AAAAGCGGTA AGGTTAATTG TTTCTAGATA
CGACTCTTTA TTGGAACATT TCAAACAGCC TGTAATGCAC TCCCAATCAA GGAGAGTATT
TGGTGTGGGG ATGTCCATTG CTGTCGAGTA GGTGCATTCC AACTATGCCT CGAAGTCGTT
GTTCGTTGAT CCAATTGTTT CAGTCAACTT GCTCGCATCG TATCTCGATA TGAGTCTTCT
CTTTCTCGAC GCTTAATGGA AAAGCCCAAC GAAGACGAAC GTTCGTTCGG TTACTGGAGT
CCAGCCGTGA GTATCGAATT GTTGGATTTC ACCCGAAGCC ATTGACAAAA GCTGCAGCGA
TGTGACGTCT ACGTGGCATC TTTCCCTCAG GTCGACCTTG CACACCGACT TCAAATTATT
GGCGAGCTCT GGCGAGCGGG CATCAGAGCG GATTTCCAGT ATGACGATGG AAGAAGTTTG
GAAGAGGTCA CACAGGAGTG CCAGGACCAG AACATCCTGT AAGTGTTCTA AATGGCAGCT
TGGAACAAGT TCTGATCAAA GCATAGATAT TTGGTCATTC CCAAAGCAAG CCGATCCACT
ATTAAGATAA GGAGTATCCT GCGACGCTCG GAAGTGGAAG GTAGGCCATT TGCATGTTTT
GTCTCGTAGT TACCCTGAGC AAGCCTTCTA GTTCCTCGAA ATGATCTGTG CAATCATCTG
CGCATAGTTA TTTCTGATCA GCGACGGATC GATGCGTCCT ACGCCTCGGC TGAAGGTTCC
ATTCCTTCCG CTCAAGCCGC AGCCTTGTCG GTAGAACCCA AGCAGGCTGA AGTGGAGATC
AAGCTGATAT TGCCGCCCGA ACCCATAAGT GCGAAGGGGA CGAAGGGCAG GCCAGTTAGG
AAACATCGTC ATGGTACGAA GGTACGTTCT TTCCACATCC ACATCACCTC GGATATGTGG
GATTTTGCCT TGCTGACCGG CGAGCTCTCA TCATAA
|
|---|
| Protein sequence | MPEANKALQE EELESLRAIY PDEWHDIPPT KTAWGTEVDA GWWEVKICAM EDERVNVILK
GKMVQAYPHQ VPPLLLREPE YLTANHVQQL HKIIQDKARS KVGEVMIFEL IDTVRDFISE
NHAPLPSPGD VNLMEEKARR EEAQRAAEEA SRATEAERKK KELDKNNRYL HDQIQLNTIK
KKETANNAKY LEEERRRQES LAMLDIGDLD KRELELDEAI AIDGWEGTWK SWILFGGKRE
TLWTTYSAEP DRKHNFSQRS DTISFVRASS PNVTVHIVDF ANPYYSTPLG IKRIEACTVE
ALRAQGTMSE HVVKVYAVKR EKSPKGWERL ILVTEGLSDS MKLRSWIPKE GFGEDLSKDL
VSCINETVAK SLAGTGYARR IVDLHRSNPF IKNVIQTVPE EWPRDMWHVG LLLIQMLFGP
DTLRTYHSFP TLLQHGLLHP NPKKRLTADE SLAKLRSFDD VTRRAVRISS ALLGVSPVNR
SLFNFLPNTP QPLTPRLSRY RADFEEVEFL GKGGFGEVVK ARNKLDGRFY AIKKVKLRPE
DNEQKVYREV NNLSRVNHQH IVRYYGCWLE DANPPDLTPT LEDSVHTAST AGTGATCSTE
EDIFAVNFDD FSLSRRDQSR SASFPRIRFT NSNGDDDDDS DEDDSSEEDD TESDTESDSS
AATADPSEPR GRSQPQSSLF QQRPQAQSQR QSIPGKPSAS TSVMTSSTSD GMVRRILYIQ
MEFVEKQTLR EAITAGLTDD EVWRLLRQVL SALAHMASLG IVHRDLKPSN ILLDGDGNVK
IADFGLSTSE MTAIETASGP IASTIDNIDQ TSNIGTSLYI APEVAISRSY NEKADMYSLG
IIFFEMCYPF KTTMERVHIL TAVRQPTHDP AARFKATELL RSPLLPTPEK RKEDYDAVIF
ELTDPKSSHY NTLLDTLFDR TSHNIVDVNH RLVDYTYDND SDDQLQVWLT VVIQRLVDLF
QRHGAVETYL PLLIPETTLL DAFPNLDPVR LIEKSGQVVQ LPSSDVLAMG RSATRRQIER
IKRYHVGRKY TEHQLGGQPV ISGLLSFDIV SPIRSAAAEA ECLEVVDKVI SEFRGMRGTS
SVEYEFHVSH ETVLDAILDI IPDRPDKPRL KVLEQFRNLG ASNSANPSAQ SRNLLSNVTG
LSRILMDELE QCCIAGDFEV VRKRLESIFT STSAKRKLDT ALDDMANVIN SARACGVARK
ILFRPTLAKH SEFFRGGFMF ECVRKGKQKD VVAYGGRYDS LLEHFKQPVM HSQSRRVFGV
GMSIAVDQLA RIVSRYESSL SRRLMEKPNE DERSFGYWSP ARCDVYVASF PQVDLAHRLQ
IIGELWRAGI RADFQYDDGR SLEEVTQECQ DQNILYLVIP KASRSTIKIR SILRRSEVEV
ISDQRRIDAS YASAEGSIPS AQAAALSVEP KQAEVEIKLI LPPEPISAKG TKGRPVRKHR
HGTKLSS
|
|---|
| |