Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM01740 |
Symbol | |
ID | 3255175 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | - |
Start bp | 524470 |
End bp | 525901 |
Gene Length | 1432 bp |
Protein Length | 255 aa |
Translation table | |
GC content | 46% |
IMG OID | 638254328 |
Product | hypothetical protein |
Protein accession | XP_568312 |
Protein GI | 58261804 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGTTA TCGATCGATG GGGTAAAGGT GTTTAGGTGT GAAACATGTG CTATGCACAC CATATCGATG TAACTAGACT ATGTTTTTCG TATTGACAAG GACAAGAATC TTAACCACGA TTCCGAACAT TAGAAATATG GCCTCATCAA CGAATTCGAA ACCGGTTCGC TTGGTTCTCT TTGACGTCTT TGGTGAGTCT AGTCCAATCA TAGAACGACG TAGGAGGCTC ATCCATACAA ATGATGACTA GATACCCTCT GTACTCCAAG GCTACCCATC CACGAACAGT AAATCTCATT ATTTTTGCTG CATACGCTTC TCGCGTCTGA CTTATGCGGC AGGTACCACG AAGAAGCTAT CAGAGGTGGG CTCTCATCTG CAAGTATAAC CCCACAGAGC GTCCGTAATG CATTCAAACC CGGTATATCT TCTTTTGGAC TAATTGAGAT CGACTAAACT GACTGTCGGT TCAGCCTTTA AAACTGTCGA TGCCCAATAT CCTTTGTATG GTAAACATTC GACGCCTCCA TTGACTCCTG AGGAATGGTG GACAAGAATC ATCTATGAGA CCCTTAGGGA AGCCGGAGCT TCCAAGCGAG GTGAGTTATG ATCCTTTCGC TAATTTCCAT GTAGTAGCTA TGACTGACTC AGATGATTCT GCTGTCAGAA TTGGATGGGA AGATTGATGC GATCGGACCT GCTTTGATGA GTCGTTTTGA GAGTGATCTC GGGTATCGAA ACTTTCCAGA GACTATCGCT TGCCGTAAGC TCCCAGCTCG TTGTTTGATT TGAATCCTTG GACTAATACT AGGCTAGTAA AAGAGCTTAA GGAGCTAGAA ATCAAGACCT CGGTAGTATC CAATGCTGAT CCTCGTATTC GTGAGCATCG AACTCTTAGC CCGGGCCTCT TCTCAAATTC ACCTATGATT CGTAGTCAAA ACCTTGGATT CACTTCAGAT CTTACCCCTT CTTACCTGTT CTCCCACCCT ATCATGGGAT GTCGAAGCTG CCAAGCCATC TGCTACCATC TACGAGAAAG CATGCGAGAT ATCTGATGAA AAAGTGGGAG AAGGTATCAT CATGGTTGGC GACGAACTCA AAGCGTAAGC CCATATTCCA TCAGGTCAAT GGCGAATGAC TATTGAAGCC TCATGCTGTT CTAGTGATTT CCATGGTGCC ACGTCGGCTG GGATCGAGGC TCGTCTTATA CGGAGACCAG GAGAATGGAG TGATGGTGCT GTCAGAGATG CTAAAGAGGA ATTGGGCGGG GTGAACGTCG TTTCTAGCTT GGAAGACATT GTTAAAGAGG TCAAGCAAAG GAACGTAGGT GGCTGAGGTA CAGAGGTGTA TACTACGAGT CTGTGGTCTC AAAGGTCAGC ATGACAGCTA CTCGCAATTG GACCTCCTCG GGATAATCGG CAGCACAAAT AG
|
Protein sequence | MSVIDRWGKE IWPHQRIRNR FAWFSLTSLV PRRSYQRWAL ICKYNPTEPF KTVDAQYPLY GKHSTPPLTP EEWWTRIIYE TLREAGASKR ELDGKIDAIG PALMSRFESD LGYRNFPETI ACLKELKELE IKTSVVSNAD PRILKTLDSL QILPLLTCSP TLSWDVEAAK PSATIYEKAC EISDEKVGEG IIMVGDELKA DFHGATSAGI EARLIRRPGE WSDGAVRDAK EELGGVNVVS SLEDIVKEVK QRNHK
|
| |