| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM01690 |
|---|
| Symbol | |
|---|
| ID | 3255046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | - |
|---|
| Start bp | 510538 |
|---|
| End bp | 512507 |
|---|
| Gene Length | 1970 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638254322 |
|---|
| Product | formaldehyde dehydrogenase (glutathione), putative |
|---|
| Protein accession | XP_568318 |
|---|
| Protein GI | 58261816 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.124643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCCATTTGC TTATACCTCT TACATCTTCC ATCGTTTCAC CTCTATCTCT AGCATTTAAC
ATGTCTACCG AAGGCCAAGT GAGTATACTG TTATTTCATC AAGCAGACTT ACAACTGACC
TCTAGAAGGT TATCACTTGC AAGGCTGCCA TCGCTTGGGA GGCTGGTATG TAAAGCCTTT
GTGTCCCCTA CATATCTTTA CTGACCAAAT GTCAGGCAAG CCCCTTTCTA TTGAGACTGT
TGAAGTTGCA CCGCCCAAGG ATGGCGAGGT CCGAATCAAG ATCCTCTAGT ACGTTTTCGT
CACCGAACTC ACTCTACTCC AAAACATTTC TGACAAGTGT ATCTAGCACT GGTTTATGCC
ACACGTATGT TGCACAAATT GTGTGAAAAC TAAACGAGCG AGAATTCTAA CCGTTGCATT
TTGCTTTGGC TCTAATAGTG ATGCCTACAC TCTCTCCGGT AATGACCCTG AGGGGGCCTT
CCCCGTCATC CTTGGACACG AGGGTGGTGG TATCGTCGAG TCTGTCGGCG AGGGGGTTGA
TAACGTCAAG GTTGGCGACC ACGTTGTCCC TCTCTACACT GCTGGTAGGT ATTCAAAATT
TGTGTCTAAG GGTGAAGTTG GAAGGGGCAG AGAAAACAAG TCATTAGGAG AGTAGTTGCG
AAAGAAGCTT GGTGGCACAA AGGGGCGCGC ACAAGGAGAC AGGGGTAGGA GAGAAGATGG
TGCTTACAAC TAGCCATTCG CTGACAAATC ACTGCACAGA GTGCAGGGAA TGCAAATTCT
GCAAGTCTGG AAAGACCAAT CTCTGTGGTC GTGTGCGAAC TACCCAGGGT AAGGGTGTGA
TGCCTGATGG GACTACCCGA TTCAAGTGCA AGGGTCAAGA CATCTTGCAC TTTGTAAATT
TTCCTTCTTT TTTTCTTCCT CTATAGCCTA CTTGCTGACC TTCGTAATAG ATGGGTTGCT
CCACTTTCGC TCAGTACACC GTCGTTTCCA AGTTCTCCGT CGTCGCCATC AACCCTAAAG
CGCCTCTCAA GACTTCTTGT CTCCTTGGTT GCGGTATCAC CACAGGCTAT GGTGCTGCCA
CCAAGTCTCC TGGTATCGAG GGCTCTAACG TCGCCATCTT TGGTGTTGGC TGTGTCGGCT
TGAGTGTTTT GCAGGGTGCT AAGGCCAAGG GCTGCAAGAG GATCTTTGCT ATTGACACCA
ACCCCAAGAA GAAGGAGTGG GCCGTGAAGT TTGGTGCCAG TGAGTCTTTA TCTTACAATT
CTCTTTCGTC AAGCTCATAT GGGTGTGTAT AGCCGACTTT ATTAACCCCA AGGACCTTCC
CGAGGGCAAG ACCATTGTCG ATTATCTCAT CGAGGAGACG GATGGTGGTC TCGACTTCAC
CTTTGACGCT ACCGGTAACG TTGGCGTAAT GCGAAACGCT CTTGAGGCCT GCCACAAGGG
CTGGGGTGTG TGCACCATTA TCGGAGTCGC CCCCGCCGGT GCCGAAATCT CTACTCGACC
GTATGTTCTT CCCCGCATGA TTCACTGTAT ACTATTGGCT GATATACTTG GGTGAATAGA
TTCCAGCTCG TCACTGGTCG AGTGTGGAAG GGCTCAGCGT TTGGTGGTGT CAAGGGCCGA
ACCGAGCTTC CTGGTATCGT GGAAGACTAT CTCGCGGGCA AACTTTGGGT CAACGAGTTT
GTCACTCACA ATGAGACTTT GGAAGGCATC AACAAGGGCT TCGATGATAT GCATGTGAGT
TATTTCTTGT GAATAGGTGA GGTAGATGAC TGGTGCTGAT GGCCCATTTT TTTTAGGCTG
GTGACTGCAT TCGATGCGTC GTCGACATGG GCTTCAACGA GGCTCCTTAG GTTGTTACAG
TAGCGTCGCA TTTGGGGGCT GATGGCGGAT CCTTTCAGTA ACTCAACTTC ATTAATATAG
TAAAAGCAGT AAAAGCGGAT GTACGCTCAT GTAGTGCTTT TGTTTCTGAT
|
|---|
| Protein sequence | MSTEGQVITC KAAIAWEAGK PLSIETVEVA PPKDGEVRIK ILYTGLCHTD AYTLSGNDPE
GAFPVILGHE GGGIVESVGE GVDNVKVGDH VVPLYTAECR ECKFCKSGKT NLCGRVRTTQ
GKGVMPDGTT RFKCKGQDIL HFMGCSTFAQ YTVVSKFSVV AINPKAPLKT SCLLGCGITT
GYGAATKSPG IEGSNVAIFG VGCVGLSVLQ GAKAKGCKRI FAIDTNPKKK EWAVKFGATD
FINPKDLPEG KTIVDYLIEE TDGGLDFTFD ATGNVGVMRN ALEACHKGWG VCTIIGVAPA
GAEISTRPFQ LVTGRVWKGS AFGGVKGRTE LPGIVEDYLA GKLWVNEFVT HNETLEGINK
GFDDMHAGDC IRCVVDMGFN EAP
|
|---|
| |