Gene CNM01470 details

Gene Information

• Locus tag: CNM01470
• ID: 3255049
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006682
• Strand: +
• Start bp: 427123
• End bp: 429214
• Gene Length: 2092 bp
• Protein Length: 507 aa
• GC content: 46%
• IMG OID: 638254300
• Product: RNA processing-related protein, putative
• Protein accession: XP_568346
• Protein GI: 58261872

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.302263
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTGGT TTTGCTCACA ATGGGGGGCG CAGGAATTAC TTGACCTCGC GCAGAAGTAT 
GCGTGTCGAT TCTTGGGCTC TACTTCTACT GTGTCCAAAT CACTAAGCCA AATTTATTTC 
GCCCTGAGCG GTATGTGTAT ATCCCAAGGA TCGATAATAT AGCTTCTTAT CTTCTTCGCA 
GGCGGTAGAG GTATTGATAC TTCGATATTA AGCCAGGATT TCTCAACGGA AGTAAGATCA 
GCTCTTCCAG TAAAGGCAGC CAAAGTCTGA CCCATATCCT GTAGAGATCT GATTTTACCC 
GAGGCGCAGA GTTGCCAGCA TCCATCGTCT TAAATCGATT AGGTAAACGC ACTTACTCTG 
TGGACAATGA CAAGACGTAT GATGTGGACA ACATTCTCAG TGATTTTGTG AGGTTTTTAC 
CTTTCCCTTT CATCTTTGCA AATTACAGTG TACTAAGCCA ATCTTAGGGC CACATTCTGG 
AGAAGATGCT CACCTCCGAA GCAAAAGATT TAAAACGCTT CCTTCTCTCA AGTCCCGAAG 
AATCGGTTTC AGACGCGGAA AGAACAGAAA GAGAAGCCTA TCATTACAAA AAAGTACGTA 
TACACCTCGA AAGCTTGTGC CAACTCTTCT ACTTGTAGAT TGGCTCCATG CTCCTCCGTT 
CTCAACTGGA TTGCTATCAC CCTGACTTGC CGGGCTCTGG TGTTTTTGAT ATCAAGACCA 
GAGCGTGCTT CCCTATTCGT TATGATTCCG CAAACTACCT TGTTAGTCAT TATACTCTTC 
TTTGGCGACG TTGTAATGAT TATTTTAACT TCTTGGTGTA GGCCAACTCT GTCTATGATA 
TCTTCAAGGA CCGAGGGTAC ACCGGATCTT ACGAGAGAGA GTAAGTTCAT CGTGTTGTTT 
CGAGCCATGG CCATGTCTCC TGACTCTGTC TTAGGTACTA TGATCTCATG CGTGCAGTCA 
TGCTGAAATA TAGGTAAGAC GGATGGAGAA CAAGTCTTAT ATGTGGGGCC ATACCTGACC 
AAAGACAGCT TTCAAGTTCG CATTGGTGGC ATGGATGGCA TCTTCCTTGC TTATCACAAC 
ACTTCTCGCA TCTTCGGCTT CCAATATGTC CCTCTGTGAG TCTTTCGCGT GACACAAATA 
GATGATGTTC TTCCATGCTG ACGTCCAAAT AGGACTGAAA TTGATCAAAG GATTTTCGGA 
TCAAGCGAGA TGGCCGATGC GGCTTTCAAG ATCTCTGTGA CCGTTCTACA GAAGTTGTTA 
GACCTCAGTG TTAAAGCGTT TTCTGGTGTC GTACGTCGGG CGGCCGTTCA CTTTGTCTAT 
CATTGGCTCA TAAATTCTTT TTTCCGTCTC TGTAGGACGT AAAGATGATC ATCAAACACA 
CTCCTAATAT TGATCAAAAC AGTGTGACGG CATATGTAGA GCCCAAACAC TGGAAAGATG 
AAAAAGGACC GCCTCCTGTT CAGGCAATCA CGATCACCAT GGAGAACTTC CTTGATGGTC 
AACCTGTTCA GGGCCAAATT CCCGCCTTCG TCATCGATGA ACGTACTCGA AAAGTACCCG 
AATGTAAGTC GTCCCATTTC TTTTCAAATT TCCGTGTCCG GGGAGTGGTT GCTCATATGC 
TGTATTCTCA GGGACTGTCA AGTACTCTGT AATCAAGACG GAGATGGACG AGAATGGCCA 
GCTAGAAGCT CGCAAGGGTG CTCAGAGTCT TCGGAAGAAG TTGATCGACA TGGCATCATT 
GTATATCCCT GAAGGCCATA CTGTTGAGAG CATGACTCGT TATTACGAGG CTAGGCGGCA 
AGCAATTGAG GCAGGCCGTC ATGCAGCAAC GGCGTCTCTC ACCGACCTAC CAGAACCTAC 
CGATGACATC GGCAACGATG TCAAAGATGT AGAGAGTGAT ACTCAGAATG AAGAAAGCCT 
GGTCCCTGCT TCTGCTGAAG AGGAAGCCGT TAAATCTGGC GATCAGTTAA TGACTATCCA 
ATGGAAGAAA CCTGGGAAAC ACACGTTGAA GTTGAGGAGG GAGGCTAAGG AGAGTGGAAA 
GGCATATGAG AAGAGGAAAA AAGCTTGGAG ATCTGCTCAT AGAAAGCCGT AA 

 

Protein sequence

MIWFCSQWGA QELLDLAQKY ACRFLGSTST VSKSLSQIYF ALSGGRGIDT SILSQDFSTE 
RSDFTRGAEL PASIVLNRLG KRTYSVDNDK TYDVDNILSD FGHILEKMLT SEAKDLKRFL 
LSSPEESVSD AERTEREAYH YKKIGSMLLR SQLDCYHPDL PGSGVFDIKT RACFPIRYDS 
ANYLANSVYD IFKDRGYTGS YEREYYDLMR AVMLKYSFQV RIGGMDGIFL AYHNTSRIFG 
FQYVPLTEID QRIFGSSEMA DAAFKISVTV LQKLLDLSVK AFSGVDVKMI IKHTPNIDQN 
SVTAYVEPKH WKDEKGPPPV QAITITMENF LDGQPVQGQI PAFVIDERTR KVPEWTVKYS 
VIKTEMDENG QLEARKGAQS LRKKLIDMAS LYIPEGHTVE SMTRYYEARR QAIEAGRHAA 
TASLTDLPEP TDDIGNDVKD VESDTQNEES LVPASAEEEA VKSGDQLMTI QWKKPGKHTL 
KLRREAKESG KAYEKRKKAW RSAHRKP