| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM01450 |
|---|
| Symbol | |
|---|
| ID | 3255255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | - |
|---|
| Start bp | 422822 |
|---|
| End bp | 424575 |
|---|
| Gene Length | 1754 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638254298 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568455 |
|---|
| Protein GI | 58262090 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCTACCACGA CCAACACAGC TTGCTTTATA ATACATTTAA TACATCGCAA ATACCAAATT
TCACTAGCAT GGAAAATGCC AGCTCCGCCT TAACCGCTTT CAGGCAAGCG GAGAAGCACT
TCAAGAATCG AGCTAATAAA GATATCTACC CATCACTTCG TCAATGGCAA GACCGTTTGA
TCGACTTGTC CCGGCCAGAT TCTCAAGAGG AGGATGAAAT ATGGGCCGCT GGGTGGTGGA
GTCCTGATCA TGACGTTGTG CCAGCAGCTA CAAGTGGCAG ACGGAGAAAG GGGGTGGAAA
AAAAGGATAA AGGGGAGAGA CCAGAGCTGG ATATCGCGAG TCTTGAATCT TTGTCTTTAC
ACGGTGGGAA GACTGGATAT ATCGTCGCTC CAGGTGCGTG TGCCCCTCCC CATCTGAGAG
ACCGCTGTAA CAACTTTTGT GACACAGGAT GTGTTCTTAT ACCTGGCTAC CTCACGGTCG
AACAGCAACT TTCCTTCCTG CATGATTCCC TTGCCCGATA CACTCTCCCA CCTAACCCTC
TCTCGCTTAG CACTCATTAC GATCTTCCTC CCAACCTTTT CTCCTTATTT GTCTCAAACC
CGGAAGCGAC CGTTCTTCCG AAACACATGA CTGGCACAGT CAACCCCGAA GCACTTGCCT
CCGCTTCCCA ACCAAAGAGC AGGAAATTGA ATGATACAGA ACCGGCATCA GTGATAGGGT
ATGAAGAGAT TGTAGCTCGA AATAAAGCTT GGACAGGGGA TTTGCCTAGC GACAAGCTGG
GAGCAAAAGA GGTGAGGAAG CTTTGGAAGG AAATTCGCTG GGCGAATCTG GGATGGGTAT
ATCAAGTAAG TTTCATTTTT GTTGTCAATA GTCTGCAATG TAACTTTGCT CATCATCATT
TGATTAATTA GTGGTCGACA AAATCGTATG ATTTCGCACC AGAAACCCCA ATACCTTTCC
CCGCTCCGCT CGCCGATCTT TGCTCCGAAG CAGTAGCATC AGTGCCGTGG GAGAATGTGT
TCTCTTCAGT ATCGGATCCA GACGCTTCAA CATATGGTTG GCAATCTTGG CCAAGAGATT
ACAGTACGTC TTCTCACATT AATTGAATCG CTTTGAAATC AAATCTGACT TGTGGTGATA
GAGCCTGATA CGGGCATTGT CAACTTTTAT CAGCTGAATG ATACACTCAT GGCACACGTC
GATCGTGCAG AGTGAGTTTG ACAAACCCCA AAGAGTCACA ACCATCTTGC TGACCCATAG
AAACAGACTA GATCCCGCTC GACCGCTGGT TTCAGTCTCG TAAGTATTCG GATCCATCCT
CTCTCCCACT CTCTTCTCGC TGGTCCTCGT ATAACTAACT CCAATCCAGT TTGGGGCACG
CTGCAATCCT TCTTTTGGGT TCTGACTCTC GTGATGAAGT CCCTAGACCG ATAATACTTC
GTTCCGGCGA TATGCTGATC ATGAGCGGTA AAGGCAGACA GTCTTATCAT GGTAAGCTAC
TTTTCTTAAA TACCTGTCTC CCCAGTCCTC TGGACCGTCC TGAAGGAAGA TGCTTATAAA
CGCTATGCTG GACAGGTGTA CCCCGTATCC TGGAAGGGAG CCTTCCATCA CATTTCTTGG
TACAGGAAAG TGACTCTGAG GAGATGAAGG CAGCGAAGAA TTGGATAAGT ACAGCTAGGA
TTAACATCAA TGCTAGACAA GTCTTTCCAC CAGGTTTCAA AAGAGTAAAT TGACTAGCAT
CACACATCCG AATA
|
|---|
| Protein sequence | MENASSALTA FRQAEKHFKN RANKDIYPSL RQWQDRLIDL SRPDSQEEDE IWAAGWWSPD
HDVVPAATSG RRRKGVEKKD KGERPELDIA SLESLSLHGG KTGYIVAPGC VLIPGYLTVE
QQLSFLHDSL ARYTLPPNPL SLSTHYDLPP NLFSLFVSNP EATVLPKHMT GTVNPEALAS
ASQPKSRKLN DTEPASVIGY EEIVARNKAW TGDLPSDKLG AKEVRKLWKE IRWANLGWVY
QWSTKSYDFA PETPIPFPAP LADLCSEAVA SVPWENVFSS VSDPDASTYG WQSWPRDYKP
DTGIVNFYQL NDTLMAHVDR AELDPARPLV SVSLGHAAIL LLGSDSRDEV PRPIILRSGD
MLIMSGKGRQ SYHGVPRILE GSLPSHFLVQ ESDSEEMKAA KNWISTARIN INARQVFPPG
FKRVN
|
|---|
| |