Gene CNM01220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM01220 
Symbol 
ID3255271 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp365050 
End bp366365 
Gene Length1316 bp 
Protein Length303 aa 
Translation table 
GC content63% 
IMG OID638254274 
Productsterol metabolism-related protein, putative 
Protein accessionXP_568281 
Protein GI58261742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.377134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACT CGTGGTACGA CACACTCACA TCCGCGCCCG CCCTCATCGC AACCGCACTC 
GGCGTCTCTG TCGCAGCTCT CTTCGTCTCC ACGCACAACA ACAGCAACAA GACCGCAGCG
CAGGTCAAGG AACAAGTCAA GGAAGTCGCT CACAGTGTCC ACGCAGAGGG AAGCACAGGC
AAAATGGCGC AGGCTGTAGG TCGCCTGCGC GGGTGCACGG ACACCGGGGC TGATGGAAAT
ACGCAGGGTG CTTCGATCAT GTCCGCTCCT GCGGCAAACC TCGCTCCTCC CAAGGTAGAT
GCGGCATGGA CCGGGACACG CGGCGGAAAC TGATGCATAG CAGGAGGACC CGATCACGCC
GTCTGAACTG GCCAAGCACG ACGGCTCCGA CCCGTCGAAG CCGATCTACG TAGCTATCAA
GGGCAAAGTA TTCGACGTCT CTCCGCGGAG CGAGATGTAC GGGCCGGGCA AGGGGTACAA
TGTGTTTGCG GGCAAGGACG GGAGCAAGGG GCTCGGTGAG TGTCTGGCTG TGTGCGCGGG
GACGGGGCTG AGTGCGGTGG ACAGGGATGT CGTCGCTCGA CCCGACGGAT GCGGTGGCGG
ACTACTCGTC GCTGAACGAA AGCCAGATGA ACACGCTGAA CCAGTGGGAG GCGTTTTTCG
AAAAGGTGCG TGGCGTGGGC GTGGGCGGGT GCTGACGGGC GCAGAGATAC AGCGTGGTGG
GGCGGGTCGT GCAGTAGCTA GTGTGATGCA GATTATTGAT GTTCCAGACT GTTCCAGACT
CCAGTGGCCG TGCATACAAG GACCGTGCAG GCGAGCCGTG CAGACAAAGG AGGGTCCCAA
ACACCGCACC CCTTCTCCGC GCATATATAG ACCCATTCTC CCCTCCCCCT CCCCCATCCT
CACACAACAT GTCCGCAACC CAGTTCTACG GCGGCCAGCC CCAGCCAGCG TACGGCGCCC
CCCCGGGCCA GTATCCCCCC GGCGGCGAGT ACTACACCAG GTACGTATCC CAGCTTCTGC
CCCTGCTGAC GCTCTGACTA CAGCCAAGCA CCCCCGGTAA GCCCCCCACG CCCGCCCGCC
ACCTGCTAAC CCTCCCCAGC CCGGCATGCA CAGCCAATAC GTCCCCAGCA ACGGCATGGA
CTACAACGCC CCTCCCCAGG AAAAGGGCGA CAGCGGCCCC GGCATCGGCA CAGCGGCCGC
GTGTTGCGGC CTCGGCGCCT GTTGCTGCTG CTGTCTCGAA TGCTGCGCGC CTTGCCTCTG
TCTCGAGGCG ATGGAGTAGA ACGGTGGATA GGCGGGCCAA GTAGACGTAC ATACCG
 
Protein sequence
MSNSWYDTLT SAPALIATAL GVSVAALFVS THNNSNKTAA QVKEQVKEVA HSVHAEGSTG 
KMAQAEDPIT PSELAKHDGS DPSKPIYVAI KGKVFDVSPR SEMYGPGKGY NVFAGKDGSK
GLGMSSLDPT DAVADYSSLN ESQMNTLNQW EAFFEKIQRG GAGRAVASVM QIIDVPDCSR
LQWPCIQGPC RRAFYGGQPQ PAYGAPPGQY PPGGEYYTST PGKPPTPARH LLTLPSPACT
ANTSPATAWT TTPLPRKRAT AAPASAQRPR VAASAPVAAA VSNAARLASV SRRWSRTVDR
RAK