| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM01160 |
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| Symbol | |
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| ID | 3255078 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006682 |
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| Strand | - |
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| Start bp | 346327 |
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| End bp | 352037 |
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| Gene Length | 5711 bp |
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| Protein Length | 1526 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638254267 |
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| Product | signal transducer, putative |
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| Protein accession | XP_568463 |
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| Protein GI | 58262106 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGG CGACTTACCA GCCTTCTCCT CAATACGGTG ACAGTCTAGA GTCGCCTGGT
GCACTTAAGG TCAACGGTGG TTTGGGTGTG CCGTCGAATG GCTGGCCCGG GTATCTTCAG
CCAGAAGCGA GAACAGGACG TGATCGATCA GCTAGTGCTG TGACCATGAA AGCTGGGGAT
GGGCATGATG GGGCAGTAAC TCCAAGAGGT GACGAAAGGT ACGACAAGGA TACATTGTTT
GGTTCTGTGG TAGAGGATGA AAGACTCGGA GAATCTCAAA AGCAATATTC GAATACGAGT
TACGCCACGG GCAATAATGT CCCTCTTTCC ACTTCCGAAA CTGTTTCTTC TGCGGACCAA
GGTTCACCTG GCCCACCGCA TCGCCAAAAC TCATCCACTT CCTCTCTTCA CCCTCGATCT
ATCAGTCACA ATACAGGCCG TACTTCCTTC GATCTCTCTC CTTCATGGGC TCATCAAGCC
CAAACACCTT CCCATTGGGT CGAACGTAAA CTCCAAATTC ATCAGTCCCA TCGTCACCCT
TCTCTTGTAG ATTCGTTTGA GGACGAACAA GGACCGAGCG GATGGGAAGA AGAGGAGTGG
GAAGAGGAAG AGGATGAAGA GATCGATGTA GATGAGGGTC AGTTCTTCCA GCCCGCCTTT
TTGAGCGAGA TGGCATTACA ATTGAGAGAT AAAGTGGAAA GGCAACGACA CATTAAAGCT
GGTATAGCCT GGGTTGGAAG TTTCACAGGG AGAGACATTG TCACTACCAT CCACAACCTC
CTGCCTCCAC ACACCCGAGA AAAACCCAAC GACCGCCGAT TCGCCCTCCT CCTCGCGCAG
AGTTTACAAA ATCAACTTTG GTTCGTTGAA GTTGACTGGG ATATCAAGCC CCTTCGTGAT
TCCTCTGATG ACGTCTTCAG ATTCATGGGA GAGATGGAAG GTATGGCTTC TGGCGCAGAT
GCTCTTACCA CGGAGCTGCC CAAGGGTCTT ATGACGATGG CTACCCGATG TTATTCCCCC
TCTTGTACAG GCGACAAGCG GTGTTACTCC CCTCGGTGTC CTTACAAAAC CTCACCGGGC
ACTTTCCTCC CCACCAAAGA ATCTATCATC CCACTGCCTA CGCCGGTGTC CATAAGACAC
GATGATTGGA AAGAAGATAT CGATCCTTTG ATGTTACGTG ATCTTTCACC TCGTGCTATC
ACACGTCAAG ATGTCATCCG CCAAGCACTT TCATCTGAAC TTGCATATGA AGCTGATCTT
TCCATCATGG AAGATCTATT CATCACGCAC CTTCGTCTCG CTGATCCGCC AATCATACCC
GACCCAATAC ACAGAGAAGA GTTCATCCAT GAAGTTTTTC ATAATGCGCT TGAGCTCAGG
GCGGCTAGTA AAAGGTTGAT CGAAGAATTT ACGATTAGGC AGAGAGAACA GCCACTCATC
CAGTTTGTGG GGGATTTGTT TTTACAGGCG GCAACAGAAT TTAGGAACAT CTATCCCGAG
TATACAGGGA GTCTGCCGCA GGCGGAGGCG GCGTTGAGTA AGGAACTGGA GGAAAATACC
GAGTTCAGGT TATACACCGA GGTAAGTTCC AGGAAAGTCC GAAAAACATC TTATTCACGC
CTTTTTACAG CGAGTGGTTA GAGAAAACGA TCGTCGAAGA GATATCCGTC ACCTCGTCAC
TCGTCCCTCC GCCCAATTAC AACGTTATCC CGCTCTTCTC GAAGGTATCC TCAACGTCAC
AGACCCTGAC GATCCCGATC GCGAATTTCT CAGTCAAGCC CTTCAATCTA TCCAGTTCAT
TTCGAGTCTA TCACAGCTCA AACTTTTCCA TGCGAGTAAA GGGAGGGGAC CGGCGAGTAA
GCTGGAGTGG TTTGATCTGG TCAGCGAAGA AGATAGAAAG GCTATCCCGA AAAAGGAGCA
GAAGAGACAG ATGCTTATCT GGGAGTTGAT CCAAGGTGAG ATCCAGTATG TGGCGGATTT
GGAAGTACTG GGAACTGTAA GTCATCCATC GTCCTTCCGT ATGAGTAGCT CTGACGCCAT
CAAAGGTATT CGCGGAGGGC TTAAGGATGG CCGAACCAGC TGTGATAGAC CGTAATCGCC
TGGACGTCTT CCTTGACGAA GCATTCCACA ACTGGCGCTC TCTCTATGAG ATACATAGCC
GTTTCCTGCA CAATCTCCAG ATTCGTCAAC TTGAACAACA CCCACATATC GGTATGATTT
CCGACCTCGT ATTCGATGCG GCACTTAACT GGCAAGAGGC ATACATGGAG TATGTTCCGC
ATTATCCTAT TGCTAAGTTG AAGGTACACG AGGAAGAGGC TAGTAATACA AAATTTGCCA
GTTTTCTCAA GGTATGTCTC AAACCCTTTT TCTTTTAGTA AATTATGGAC TAATTTGGCG
CAGGCTTGTC TGCGAGACCC CATGACAAAC AAACAGGATA TCGACCATTT TATGAGCCGT
CCCATATTCC GTTTACTGAG ATATCCTTTA CTTCTTGATC CCATCCGTGA CTGTCTAAAA
GAGACGGCCG GACCCGATGA TCCCGACTAT GAACAAATCC CTCAAGTCAT GGAAGTTATC
GCTAGCTTGG GTAAGGCTAT CCAGAAAGGT GTAATCTCGA ATGAGTCGAA AGTAGAGCTT
TGGGCTCTGC AGAGGACGTT GGACGGGTCA AAGATCTCAC CCAGAACAGT CGCCGACCTG
GATTTGGCGA ACCCTATGAG AGAGCTTATC CACCGTGGTA CTGTGTACAG ACAATCGGAG
GGAAGTATAG GTAGTGGTTG GACAGAGCTG AACGCGTTCT TATTCGATAA TTTCTGTGAG
TATTCAGATG TTGGTTTCTA TAAAAGGAAC CTTGGCTAAA CAGACTTGGC AGTGGTCCTC
GCGAAGTTGG AACGGCCTAC GAAACCCTCC AAATCGTCTA GGAAAGAGCA TCGTAAAGAG
AAATACGCTA TAAATCGTCC AGTAAGCCTC TTGTGTTATC ATATTGCAAC TTCCATTAAC
CTTACGTAGC CAATCCCATT GGAACTTCTC TCACTAGGGT CCTTCAGCGA AGCACCCCGC
GTACGGAATA CTGGTCGTCT TTTTGGCGTC GGTGGTGCAT CCCATTATGA TGTTTCCAGC
GATAGATCTA TGAATGCCCC CAAAACACCA GGATCATCAA AAAGTGCTGA CACATCTAAA
CTCTACCCTT TCAGCATCTC GTTCATTGGG GGACAGGGAC AGTTAGGAGG AAGTTATACT
TTGTGGGCAG ACTCTTACAA AGCGAGACAA GATTGGAGAG AGAAGTTTGA GCATGCCAAG
GTGTTGAGGG CGGAGATTAA TGACGCTGGC AAGGTGCGTT AACCGAACTT TCAGGAAGGA
TGAAACTGAC TGGAAGCAGG TCTTTGAAAT GAATCCACTA AGCGTGGATA CGTTCTACAT
GCCTCCAAGC TATGCCATGC AGAAGGATAA GGACAGTCAA TACACGGGCC GAGTGACGTG
TAGTTGCCCA TTCAGTAAGC TTATCCTTCC ATTCCCACAC GGTGAACTTT CGCTCATCTT
TGCTTTTGCA GTAACTCAAG ATCAGCGTCG GCTGATCGCT GTCGGCTGTC AAGATGGTGT
GTGGATTGGT ATCCGCGGCG ATTCCCGTTC CCTTCGGAAA GTGTTACATG TCAAGTCGGT
CACCAGTATC GCGGTTTTAG AAGAGTTCTC CATCTTCCTA GTTCTGTCTG ACAAAAGTCT
GGTCGCCTAT CAACTTGAAG CATTGGTCCC CAGCGCTGGT CAGAAACCAG TCAAGGCTAC
TACCGAGAGA ATCTCCATGC CTAAAGAGGA AATCTCTTCA TTTACTGTTG GCCGTCTGGA
CGGGAGAACA TTGGTAGTGT TAATGCGAGC TGAGACAACG CAGACGGTGT TCAAGATCCT
GGAACCAGTA TTGAATAAGA ATACCGAGGA CACGACGAGG CAGCGAAGGC CGTTTGGATT
CTTAGGAAAG ACATCTGAAT GGTTCAGGCC CTACAAAATG TTCTACCTAC CAGCTGAAGT
TTATGGGGTG CATTTCCTCA AACATAAGCT GGCTATTGTC TGTTCCAAAG GATTTGAGAT
TATGGATTTG ACAGAGTATG TTCTATCAAG CTTGTTTATG GGTAGATCTT ACATAACCTA
ATCCGATCGT AGCCTTAAAG GAGGAAGCAT ACCGATCTTC GACCCCGCTA AGATCAAAGA
GAAGCCATAC TTGTCCGATC TAGAACGCAA ATGTACTCAG GGAAGAGCAT TGGGAATGTT
TAGATCAACG GAAACGGAGT TCTTGTTGTG TTACGAGAGT GAGTAAAATG TCGCCGTCTG
AATACAGAAT TACTGATTTT GCATTCAGCG TTTGGTCTAT ATATTCATCG GTGAGTAGCA
TCACTTCCTT GTATAATCAT TGCTTACCAA CCGTAGATAT GGTGAACCTA ACCGAGACTG
CCGCCCGATC GAATGGCAAG GCCGTCATGA CAGTGTAGCA TTCCATCCGC CTTTCCTTCT
CCTCATATCT GCACCATTCA TTGAGATCAG ACACATCGAT ACCGGAAAAT TACTACAGAT
CTACACTGGA AGTGATCTGA GATTAACCTG GGAGCAAGTA GTCGCCATTG CTTTTCGAGA
GTACAAGCTA ATGTCTCTTG ATAGTGGGTC GGGTGGACAG AAGAACCCGC CTGTTTTGAA
TCCCGGCAAA CAGTGAGCTC TTCGTTGAAA CTTGTCATGT GAGGAAGCTG ACAGCATTTC
TCAGTGGGTA TGGGGACGAG ACGAAGATTC AGGAGCCACA GATCCACATT TGTCAGCGAA
CGACTGATCA TAAGCAAGGT AGAGGCCAGC CGGCTATCGG GCAGGTAGTG TAAGTAGTAT
TGAATGCTTC TTCAACGTGC AACCGCCGAT GACTCTTGAT AGGTATGAAT TGAGTCCAAC
TTTGTTACTC AACAATCCTC TTCTGAACCC GCTTAACACA CTGGATCCTA ACTACCTTCC
CCCTCTACCT CTTACTAGCC ATGCAAATCC TGCCATCAGG GTGCGTACTT GTGTTTGTGA
AAGTTAATCA TCGCTAATAT CGGCTCTTGC AACTCGCAGC AAGCTCGCCC ACCATCGATC
AGAACCACGA ATTCCAGCGA CCAATTCCCT CACCCCAATT TGTATCAAAC TTCCAATCCA
TCTCAAGGAT ACATTCCTTT CCCTAACGCG CAAGGCTACT CTGCGCAGCC ACCTATGCTC
CAGCGCGATA GCTATGGAAC TCGATACTCA AGAGATAGTA GCTCATACCG CGACTCAAAT
TCGGTGTACA ACATGACGCC AATCGATCCA TCCCCTCAGT CGAGTACGGG CGCTTTCCCA
ATACAGCCTC AAAACCAGCC AGCGGGGTAT CCACCACAAG GAACGATTGG CGGCCTAGGC
TATTCACAAT ATCCAGAGCC ACAACCGCCG GTCGTGCACG GGCAATCACA GGGGCAGGAC
CAAGGCTATG GAGGTTATAA CGATCATGCG ATAAGAGCTT GGGCGCAAAA CGGAGGATAT
GGAAGGAATG ACGCCTACGG AGGGTATGAA TGAGTTGGGA GAACAGATGA GCTGGTCTCT
TGTTTTGTCG ATAAAAGACT CTCGAAAGTC GCCTCCATAT CAGGCGCTTC ATGTTGTCTT
GTGTAAACAT TGTACCAGTA CTGTAACTAT AGCAATCACA TCATACAGCA TCGGGTCTAT
GCACAAAACC A
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| Protein sequence | MTSATYQPSP QYGDSLESPG ALKVNGGLGV PSNGWPGYLQ PEARTGRDRS ASAVTMKAGD
GHDGAVTPRG DERYDKDTLF GSVVEDERLG ESQKQYSNTS YATGNNVPLS TSETVSSADQ
GSPGPPHRQN SSTSSLHPRS ISHNTGRTSF DLSPSWAHQA QTPSHWVERK LQIHQSHRHP
SLVDSFEDEQ GPSGWEEEEW EEEEDEEIDV DEGQFFQPAF LSEMALQLRD KVERQRHIKA
GIAWVGSFTG RDIVTTIHNL LPPHTREKPN DRRFALLLAQ SLQNQLWFVE VDWDIKPLRD
SSDDVFRFMG EMEGMASGAD ALTTELPKGL MTMATRCYSP SCTGDKRCYS PRCPYKTSPG
TFLPTKESII PLPTPVSIRH DDWKEDIDPL MLRDLSPRAI TRQDVIRQAL SSELAYEADL
SIMEDLFITH LRLADPPIIP DPIHREEFIH EVFHNALELR AASKRLIEEF TIRQREQPLI
QFVGDLFLQA ATEFRNIYPE YTGSLPQAEA ALSKELEENT EFRLYTERVV RENDRRRDIR
HLVTRPSAQL QRYPALLEGI LNVTDPDDPD REFLSQALQS IQFISSLSQL KLFHASKGRG
PASKLEWFDL VSEEDRKAIP KKEQKRQMLI WELIQGEIQY VADLEVLGTV FAEGLRMAEP
AVIDRNRLDV FLDEAFHNWR SLYEIHSRFL HNLQIRQLEQ HPHIGMISDL VFDAALNWQE
AYMEYVPHYP IAKLKVHEEE ASNTKFASFL KACLRDPMTN KQDIDHFMSR PIFRLLRYPL
LLDPIRDCLK ETAGPDDPDY EQIPQVMEVI ASLGKAIQKG VISNESKVEL WALQRTLDGS
KISPRTVADL DLANPMRELI HRGTVYRQSE GSIGSGWTEL NAFLFDNFLV LAKLERPTKP
SKSSRKEHRK EKYAINRPPI PLELLSLGSF SEAPRVRNTG RLFGVGGASH YDVSSDRSMN
APKTPGSSKS ADTSKLYPFS ISFIGGQGQL GGSYTLWADS YKARQDWREK FEHAKVLRAE
INDAGKRRLI AVGCQDGVWI GIRGDSRSLR KVLHVKSVTS IAVLEEFSIF LVLSDKSLVA
YQLEALVPSA GQKPVKATTE RISMPKEEIS SFTVGRLDGR TLVVLMRAET TQTVFKILEP
VLNKNTEDTT RQRRPFGFLG KTSEWFRPYK MFYLPAEVYG VHFLKHKLAI VCSKGFEIMD
LTEYGEPNRD CRPIEWQGRH DSVAFHPPFL LLISAPFIEI RHIDTGKLLQ IYTGSDLRLT
WEQVVAIAFR EYKLMSLDSG SGGQKNPPVL NPGKHGYGDE TKIQEPQIHI CQRTTDHKQG
RGQPAIGQVV YELSPTLLLN NPLLNPLNTL DPNYLPPLPL TSHANPAIRQ ARPPSIRTTN
SSDQFPHPNL YQTSNPSQGY IPFPNAQGYS AQPPMLQRDS YGTRYSRDSS SYRDSNSVYN
MTPIDPSPQS STGAFPIQPQ NQPAGYPPQG TIGGLGYSQY PEPQPPVVHG QSQGQDQGYG
GYNDHAIRAW AQNGGYGRND AYGGYE
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