Gene CNM01130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM01130 
Symbol 
ID3255131 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp340482 
End bp342320 
Gene Length1839 bp 
Protein Length338 aa 
Translation table 
GC content46% 
IMG OID638254264 
Productconserved hypothetical protein 
Protein accessionXP_568406 
Protein GI58261992 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATTATTAA ACCCACACAA GATCCATCTT TCCTTGCAAA CGAGAAACCT TCTTCAACTT 
TCATCGGTCA ACCATAACCA AAGTGGAAGA ATCAACGAAA ATGGCCCCAG CACCCACACA
GACTCACGCT CCGGATTCAC AAGGCTACAA TTCAGATGCC GCCGCACAAG CTCAAGCGGC
AGAGATGAGC GTCATTCTTT GTACTGCTGG ATGTAAGTAT CGCTCATAGC TTATAAATCT
ATGTGGACAT GAGAAGATGG GTAACTGAGT GAGAGGTGGG TGCTGACCGG GCTACATACA
GATGATCATA CCATAAGATT CTGGGAAGCG TGGAGTGGTA TTTGCTATCG ACAAATAACA
CTCTCACCAC AATGGGTCCG TTCATCTTTT TTCGCAGATC GCTAGATGTA TAGCTGCTGA
GAGATAGATG CAGAAACAAG TGAACAGGTT AGCTATCAGT CCGAATAAGG CGTATGTAGC
CGCTGCTGGA AATGGTACTG TCCGGTAAGT TGGCATGTCA TTTCACCTCG AGCTGTTTTA
GCTGATGCCG GTTAGGATAT GGGATATTCA GTCATTATCG AACACTCCTG TACGCCAGAA
CATCATGGAA TGTATATGAC TGACGAACTT ATCTTGCAGA TAGCAACCCT TGAAGGCCAT
ACCGGGAATG TAGTTGCTCT AGCATACAGC GCTTTAGGGA AATGGATTGT CACGGGTAGC
GAAGACGGAA CAGTCAAGGT GTGGGACACA CGGTATATCA CTCTGATCCC TTGCTCCATG
TGATAATATA GCTGATGGAT TCATCCTGGT ACAGGACGGC TCAAACTCAA CGTATATACC
TACATGATTG CCCTGTCAAC GACGTTGTAA TCCACCCGAA TCAAGGAGAA TTGATAAGCT
GTGATCAGTC AGGATCAGTC AAGATATGGG ACTTGGCGGA GAACACATGT ACACACGAAC
TTGTGAGACA CGTTCCCGTT GTTCATATCA CAAACAGATA CTGACAAAGG ATAGGTACCG
GATGAAGATG TACCTATCAG AAGCGTTAGT ATATCATCGG ACGGAAATAC TCTCGTAGCT
GCCAATGACG GCGTGCGTCT CATCTTCCGT TCTCACATTC GAGTCCAACA ACTGACTCTT
GATTGAACAG GGGATGGTTT ACGTTTGGCG TATCATTCCA GTGCCGAATG CCAACGCTAA
TCTCGTCCCT GTCACCAGTT TCCGAGCCCA TACAAAGTAC ATCACTCGTT GTCTTCTCAG
CCCCGACACC AAGTAAGCAT TTTTCCTTTT CAATCTGAAT CTACTAATGC GGTCCTATTT
AGATACCTTG CGACATGTTC AGCAGATCAT ACTGTCAAGA TTTGGTCAAC GGCGGGAATA
GACTATACTC TTGAAAAGAC TTTGACAGGC CACCAAAGAT GGGTCTGGGA TGCGGCGTTT
AGCGCGGACT CCGCGTATCT CGTGACTGGT AAGCCTTCGA TCTGCCAAAC CGCTATGGAG
AGAGCTGACA AAGTGCTTAA GCCTCGAGCG ATCATGCAGC TAGGCTATGG GATTTGAGCC
TTGGGGAGAC TGTGAGGCAA TACGATGGGC ATCATCGGTC AGTTGTCGTT ACTCACTCAA
ACGTTGATAG TATGACTGAT TGGTAATTTA GAGCGGCAGT GTGCTGTGCC TTGAACGATA
TTAACCTTGC GTGAAGCACT GCTTCGCTAC TTGTAACAAC TCTTGGGCCC TTTTTTGTAT
TTCGCATTCT TTTGGAAAAT GGTGTGATGT GGGGGTACAG ATCGTAACAG ACTTCGTTGA
GGGGAAGTCA TACAATCAAT GCATTAAAAG TAAAGAAAT
 
Protein sequence
MAPAPTQTHA PDSQGYNSDA AAQAQAAEMS VILCTAGYDH TIRFWEAWSG ICYRQITLSP 
QWKQVNRLAI SPNKAYVAAA GNGTVRIWDI QSLSNTPIAT LEGHTGNVVA LAYSALGKWI
VTGSEDGTVK VWDTRTAQTQ RIYLHDCPVN DVVIHPNQGE LISCDQSGSV KIWDLAENTC
THELVPDEDV PIRSVSISSD GNTLVAANDG GMVYVWRIIP VPNANANLVP VTSFRAHTKY
ITRCLLSPDT KYLATCSADH TVKIWSTAGI DYTLEKTLTG HQRWVWDAAF SADSAYLVTA
SSDHAARLWD LSLGETVRQY DGHHRAAVCC ALNDINLA