| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM00940 |
|---|
| Symbol | |
|---|
| ID | 3255171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | + |
|---|
| Start bp | 280600 |
|---|
| End bp | 283922 |
|---|
| Gene Length | 3323 bp |
|---|
| Protein Length | 965 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638254245 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_568492 |
|---|
| Protein GI | 58262164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCTC CGACCCGACC TCTAGGAATT CGAGACAAAG TCTGGGAGGA AGGCGGGTCA
GTTTCGCTCC CAATGCACAT GTTCGGTAAG TCACAACTCT GTGAATATGC GGTGGATCCT
ATGCACTAAG TATCTATCAA CTTGCAGTAT GTTCGAACGC CAAGTTACTA AAAATCCCCG
GGCCTCGTTC GGTTTCTCCT TTACAGAAAC TTCAACCCCT TCTCTGAAGT CGAATCACTC
CCGTCGCTCA TCAATCCTTA ATATCGGCTC AGTATCAAAA CCCAACATAT TTGCTCCGAG
CATCTTCCAA GGAGAAGGGG AAGCTCAGGG CGAAGAGTCG ATGGAGATTG AAGATGATAA
GGAGTTGAGT GGGTTCGACA CGAGCGAGCG AGACGAAGCA CAGCAAGAGC ATGGCCACGA
TGGAGGTGCA GAAGGCGAGG AGTCCATGGA AATGGAGGAG GAGGACATGG ACATTACGCA
ACATATCTAT GGTGGAATCG TCCGACGGTC ATCAATTGCT CCTACCGTCG CCGCACCTTC
TGAGCTAGAT GCCGGCGCCG ACACCGAAGA GGAGTCCGAC AACGGCCAAG AACATTCCCA
TCTCGAGGAC GAGGAAAAGA CCATGGACTT TACCATTGCC GTAGGGGGTC TCCTACCTCA
TGAAGCTCCA GCTACAGCAA CTCGAAACCG AAACTCTATC GGTTATTCGT TCCCCAACCC
TGATGGTCCA GCTCTCCCAA ATCTAATGCC TGGTCAAGCT GAAGACCATG AGGTTGAATA
TCCCATGGAT GAGACGGAGG CATATGGAGC CATTATTGGG CAGGACATCT CGTTCAGTTC
TGGAAGCGAG GATACCATGG GCTCGAGGAA CGGTGACAAG ACTATGACTT TCACATACAA
TCATCACATT GCCCTTCCTA CGCAGATCGA TGGAGACGAC AGTATGGATA TGATTACCTC
AGCAGGCGGA ATAATCAGTT TACCTCCTGT CTCACCAAGA CTTAGTGTCC CCAATAACAC
GCGGCCTATC AATGGCACTC CTTCTTTTGC CCGCCCAACC GTTTCTTCCG CACAGAAGAC
TACAGCGACC AAGCGTAACG TCTTCGCTCC TTCACCAAGT CCACTTAAGT CAACCACCCC
TAGGAAAAGC GGTATTCAGA CTGCTGCTGA GGTGGCAAAG CGGTTGAGCT TTGGCTCTGT
CACCTCAAGT GGAGGTAAGA AGCGTGTTAG GGAGGATAGT CAAGAGGCAG AGGGAAGTAT
GAAGAAGAGT AGAATCGAAG CAGCGGCGGA AGAAGTGTTC GGTACTCCTC ACCATGTCTC
ACCTTTTAAT AAACCAGAGG AAGCAGAACC TTCTACGCTT ATCGTTCAGA GCACCACACC
TCCGTCTGAT CCTCCTCAGG GAACTGTTAT GTCCACTCGT CGCTCGTCCC TGGGCACAGC
GATGCGTCTT TCTTTACCGC CCCAGCGATC TCTGGCCCCT CCACAGCAGG AAGCTGAAGA
ACAAAACAAA AAGAATGTTA CTGAACCCCA GCAACGCATG CATGAGCAAC CTCAGGACAT
ATCTCTGGCG GCGTTCTTGG AGATTGCTGG TGTGCAGTTT ATGGAAGGGC TGCCTGGGTT
GAACAGGAAG AGAAGTAGTG TGGCTAAGGA GATCTTGGGG CAGTCCTATG CGAATGGTAT
GTCGACTACA CGTTGATATA TCCATCCACT GACAATCGGA TCGCAGAGAG GGACTTCGCT
CTTCACGAGT ACACGGAAGC GCAGGTCAAC AGCATTTTCC TCAACATGTA TACTTGGGCC
TCAAATAAAC TTTTTCAAGA TATCCAGACT GGTGATGAAG AGCTCACTGC CGTCGCTGCA
CGATGCGATA TTGACAGTCC CCCTGTAATT CAAGAATATC TTGCCGCGTC GGACGAAGAT
AAGCAGCTGT TCGAAATGAC CTTCAAATCA TTCAAAACGA ATACTCACTT AAAGGCGAAG
GAGATGTGGT ACGACTGGAT GTGGCAATTG CTCGAGACTA TCAAACCAGA TGTCGAAACA
GTGTTAATGG GCATGAAAGA GGTAGGACCG AAGTTTGTTC AGATAAGAGG AGCCTCTGAT
GAAAATGCAG GACAAGAAAC GTTTAACGGC GTTTGAAGAG CAAGCTGTCG TTCTTCTCCC
TCAACTCCGA GCAAGGAAGA TCGAAGTAGA ATCTAAGCTT GTCGAAGAGC GAAAAGCTGT
AGTTGAAATT GAATCATGTG ACCAAGCAGA GCTGGCTGCA TATAAAGAAG CTATAGCCGA
GCAAAGGTGT GTTCACTTAA TCATATTGCA GGCAATTCAA ATTGACCATT TTGCAGCGCG
CAAATTACGA ACTTCAGCAC CGAAGTTGCA GACCTCAAGG ATGAACTTGC TACTCTTACA
GGCAAGTTAG AGGAGTTGAA TGCAAAGAAG CACGAGTATG AAACGGCGAT CGCGCATGCC
AAGGGCCAAT GCGACCAATT CACAAGATCG GACGCCATAC GTCTGCAGGG TGAGTGAAAT
CATTCTTCAT GGATTTTAGA CTGCTCATCA TCGGCACAGA GGAGAGCATT TCTTTACAAC
ATCTTCATAT GTGGCATCCA ACTAAGATAC TTCCCGAACG TATGGAACTC ACCTATGATG
CGGAAATCCT TCTTTCCATC AACTGCTCCA ACTATATCCC TGACATCTCT TCTGCAACTT
TGGAGTACCT ATCAGAACGA ATGCAATCGT CCAAGCGAAA GTGTTCGGGC ATTAGAGGCG
AGTCACCATC TAGATGTTTG TTCGAGGTTT TCAAAGGTGC TGTGGGGGAC ATGATTAAGC
ATAAGACTTG GGATCTTCCT TCTGTAAGTG GATTGAATTG GCGCACCGAA AAACAATCCT
AATGCAGTTT CAGTTCGTTC AACAAACCGG CCTCCTCTGG TCCAACGCGC AACGCATCCG
CGCTGAACTT CGTTACATTG AGTTTCACCA CCCACTCTTC ATTACATATA ATTCCTCCAC
TTTTCTCATG TCTGTCAGTG CCAGCATCAT GATCCCACAG GCGAAAAGCA AGGTCCTCGT
GTGGTTTGAC GTTGATAAGA GTGTTGTGCA TGGCTTCCCC GGAAGCCTGG GTGGCGTCGT
GGTCTCAGTA AAGAGTGTTT ACGGGCAAGC CGAGTAGGTT GCGGTCTTTT CTTTGTCAAT
CTGAGATCTG AAACTAACTG GTGGGTAGTG TAAACCTGCT CGAGCAGACC GCGCGACAAA
CCATTGAAAT GTCTAGGCCG GAAGCATGCC TGGGCACGTT CCTGCAAGTC TGCGTAGAAG
TCGGTGCAAG ATACTCCAGT TGA
|
|---|
| Protein sequence | MFAPTRPLGI RDKVWEEGGS VSLPMHMFET STPSLKSNHS RRSSILNIGS VSKPNIFAPS
IFQGEGEAQG EESMEIEDDK ELSGFDTSER DEAQQEHGHD GGAEGEESME MEEEDMDITQ
HIYGGIVRRS SIAPTVAAPS ELDAGADTEE ESDNGQEHSH LEDEEKTMDF TIAVGGLLPH
EAPATATRNR NSIGYSFPNP DGPALPNLMP GQAEDHEVEY PMDETEAYGA IIGQDISFSS
GSEDTMGSRN GDKTMTFTYN HHIALPTQID GDDSMDMITS AGGIISLPPV SPRLSVPNNT
RPINGTPSFA RPTVSSAQKT TATKRNVFAP SPSPLKSTTP RKSGIQTAAE VAKRLSFGSV
TSSGGKKRVR EDSQEAEGSM KKSRIEAAAE EVFGTPHHVS PFNKPEEAEP STLIVQSTTP
PSDPPQGTVM STRRSSLGTA MRLSLPPQRS LAPPQQEAEE QNKKNVTEPQ QRMHEQPQDI
SLAAFLEIAG VQFMEGLPGL NRKRSSVAKE ILGQSYANER DFALHEYTEA QVNSIFLNMY
TWASNKLFQD IQTGDEELTA VAARCDIDSP PVIQEYLAAS DEDKQLFEMT FKSFKTNTHL
KAKEMWYDWM WQLLETIKPD VETVLMGMKE DKKRLTAFEE QAVVLLPQLR ARKIEVESKL
VEERKAVVEI ESCDQAELAA YKEAIAEQSA QITNFSTEVA DLKDELATLT GKLEELNAKK
HEYETAIAHA KGQCDQFTRS DAIRLQEESI SLQHLHMWHP TKILPERMEL TYDAEILLSI
NCSNYIPDIS SATLEYLSER MQSSKRKCSG IRGESPSRCL FEVFKGAVGD MIKHKTWDLP
SFVQQTGLLW SNAQRIRAEL RYIEFHHPLF ITYNSSTFLM SVSASIMIPQ AKSKVLVWFD
VDKSVVHGFP GSLGGVVVSV KSVYGQADVN LLEQTARQTI EMSRPEACLG TFLQVCVEVG
ARYSS
|
|---|
| |