| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM00900 |
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| Symbol | |
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| ID | 3255288 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006682 |
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| Strand | + |
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| Start bp | 262479 |
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| End bp | 266217 |
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| Gene Length | 3739 bp |
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| Protein Length | 867 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638254241 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_568317 |
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| Protein GI | 58261814 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.317293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTTCATTTC ATTTCTTCTT TCACATCATC ATCACCACAA CAAGAGCATA GGCTCAGATA
CCTCAACAAG CAGCGACATA TATGCGCATG TCGCCTTCCG TTCCCCCTCT TTCCGACCTC
TTTCGCACCG CCTCTTTTGC CTTTGCCTTT ACTGTCAACC TCTGTTAAGA CGCCCAACAC
TCGACGCCGT CTGTCAAAGG TTACAACCAG GCAGACAGAG ATCAATTCAA CTTACAGCAA
TTAATTCAGC CACAGAAGCG TTCAGCATTA CATACCTGGC CATTAATCAT GCTCGCACCT
CTCGCATTGC TCCCTTTGCT CTCCCTGATG CTTCCTCAGG CGTCTGCGGA CACTCGACCA
GGGAGCCTTC CCCATAACCT TCATCATCCC TATCGCCGTT CCCTCAAGCG ATCCATTACC
TCGGACGCGT CCTCTATCAA TGGCGAATCG TTCGACTTTG TGATTGCTGG TGGTGGTGTT
GCTGGTTTGA CTCTCGCAGC AAGATTGAGT GAATGGAGTA ATGTGACCGT CTTATGTATC
GAAGCCGGTG GAGACGGCTC TAACTACGAG GATCAAATTG ATATCCCTGG TAAGCTTTGT
TGGCTGCATT TCTTAGCCAC ATCGCCATGC TAATATATGA TGGCTTAGGC TACTCCTATC
TCAACTCCCT CACGGGTACT GCGTATGACT GGGCATACAA CACTGTTCCA CAGACAGATG
CTCTCGACCT CACGAAGTAT TGGCCCAGAG GAAAAGGCTT GGGTGGTTCA GGTGCCATCA
ACGGTTTATT TTGGGGAAGA GCGAGTTCCA TCGAGTATGA TGCTTGGGCT AGTAAGTAGC
TACGTAGTCA TTCAGCTTGA CACAGAAACT GATGGAAGTA GCTTTAAATC CTAATGGCAA
TGAGACATGG AATTGGGAAG AAGTAAACAA GTACATCAAG AAGGTATGTA GCCCCTGGTC
AGGTTTCTAG CTATCTTTAA TGCCTGACTC ACATACATTC AGTCCGAGAA TCTCACCGCT
CCTCCCACTG ATATCCAGGA AAAGTTTGGT ATCGTCGTTA ACGCATCTGC CCACGGCGAC
GATGGACCCA TTCAAATCGG TTTTTCCGAA TATATTTTCG ACGAGGTGGC TAAGTGGATT
CCTACCTGGG AAACTCTTGG GCTCTCTGGG AAAGATCTCG CAGGCGGCTC AACACACGGT
GCCATGATTT CCACTTCCAC CATCAACATG CGGAACCAGA CGCGATCCGA TTCCAAGGCC
GGCTACATCG ACCCTCTTCC TCCAAGGTCC AACCTTGTGA TTTTGACTGA ACAACAGGTC
ACAGGTGTCA TATTCAATGG AAGCACAGAC GCGAGTGGAA ACATCGTCGC CAGTGGTGTT
ACTTTCCAAG CGAACAGCAA CTCGGCCAAT TATTCCGTTC AGGCCAATAA GGAAGTACTT
TTGGCGTATG TTAATTCGCT ACAGTATGAA CACCGAAGCT GACTCAAACT CAGCGGTGGA
ACTGTTGGTT CCCCTCAGAT TCTTCAGCTC TCAGGTATTG GGCCCAAGGA CCTACTGTCC
AGCCTTGGCA TCGATACTAA AATTGACTTG CCCGTTGGAT ATAACCTTCA GGATCACGTT
TCGTACTCTA TGTATTGGTC CACTCCGTAA GTTTCATGTT ATATTGCTTT CTGCCGTCCT
TTGTACTGTC TTGGCTGCGA TTGGTCCAGT AATACAAGGG GAGGCTGCTC AGATTTATCT
CGAGGGCCGT TGCTGACGAT TCCCCAGTCA AGGTACCCTT ACATGGAGCA ATCTGAGTGC
ATCCTCCACG CTTCAGAGCG AGCAGTTGGC TCAATACAAG TCAAATTTCA CCGGCATGTG
GACTTACGTC AATGAAGCCG TTGGATGTGA GTAAAAAAAT TCCGTTTTAT TTCATTGATA
ACTGACATTC ATTTAGACCC CTCTATGTCC GATATCATGC AGTCAAGCTC GTCAGCATCT
ACTTACGCCT CGACAGTATC CTCTGCTATT GACGGCATGG TCACCAACGT CACTTCCTGG
CTCGATCTTC CGGATACTGT TGCTACCGGT CTTACGTCAC AGTACCAGAT CCAGCAACAG
TGGCTTACCG AGGATATTGG GCAGCTCGAA ATTGTTCTTA CCCTGCTTGG TAATGGTGGC
AACGAATTGG GTATCCAAGT CGCTTTGCAA CATCCTTTCT CTCGAGGTAC CATTTTCATC
AACTCTACCG ACCCTTTCAC CCAGCCGAAC ATCAATCCGG ACTACTTTGG CGTTGGTTAC
GACATTGATA TTATGGCCTA CGGCTCTGAA TTCGCCAGGC GTTTGGCTGC TGCGAGTCCT
TTGTCCGACG TCATGATCAC CGAGACCGCT CCCGGATCCA GCGTCACCGG TGACTCTCTT
GCTACCTACA CGAAACAGAA TTGTGGAACT GAGTACCACC CCCTCGGTAC TTGCTCCATG
CTTCCCAAGA ACAGCGGTGG TGTCGTCGAC ACCACTCTTA CTGTCTATGG TACCAGTAAC
TTGCGAGTCA TTGACACTTC TATTGCTCCC TTGCAGCTCT CCGCACACTT GATGGCCACT
ACGTATGGTA TTGCCGAAAA AGGTGCTGAC ATCATCAAGA AGAAGTATTG GTATGTTGAC
CCTGTCACCA GCTCGTCCGC GACTGTAGCA GCTGCCACCA CCTCGACCGA AGCCACGACG
GCTGCTGTAG GCGACGCCAC CGACACTGCT GTCACCAACA TTAATCAGAA CAATGCTGAG
TCTGGTAGTA CCTTGAGCTC AGGTGCTAAA ATCGGTATTG GAGTTGGTGT TGGTGTTGGC
GCCGCTGCTG TTCTGGCAGG TCTGTTGTTA TTCTTCGTGA TGAGGAAGAG GAACCAGAAG
GAGGACGAAA AGGGATGGTA CGGTGACAGA CAAGAGGGAT GGAACCCGGA TGCTGGAGAT
GGTCAGTAGA CTTTCACGAA ATTGTCACGC CGATATACTG ATGCTTGTTA CAGCTTACAA
GGAGCCTGGG TCTGCCTATC CTATGGCTGA TTTCGATTCT CACAATTCCT ATGCTTCTCC
CACACCTGCT TTCATTGGAA ACCACTCTCG GAACCAATCC ATAAATACTA TCGCCACGGC
GGATCTTGCT TCTCGCACGC CCATGCGCAA CTCTTCCTCC TTCTCCTACG CTGCCGGTGG
TCCTGGTGTC GGGCGGACTG CAAGCCCGTA CAGGGATGAT ATGAGCGATG ACGGAAATGG
TCAAGGTCAT GTGTATCAGG CTCCCGAAGC GCCCGCTGGT CAACAAGCCA CAAGGGGCGA
ACAAAGGTAT CAGCCTGTTA ACATTAGATA AATACAGATC AAATAATTCA CCTTTTCCCG
CCCCCCTCCA GCTATGAACT CTCAAAACAT CCTTCACGAC TACCAACGAA CATTATGGTT
TGAAGGACAA TACTTGTCGG ACGTTTTAGC TTCTTTTTTC CTTTCCGTTC TCATATCTTC
TCGGTTCTCT GTGCCTCTTA TCATACATTC TATCATACAG TAACACTAGT ACCTGACCTT
TAGACAATCG TTTTACGCCG CTATCACGCA TCATGACCGT ACAAAATTTC CGAACACTGT
GTATAAGGAC GATTCTTTAT TCGTGTCTAG ATACAGTCTC AAATGCCCCC TCACTCTTTC
TCTTCTGCAT TTTAGTTGAT TCCTTCATAT GTCGTAATTA ATTGATTATG TGAACAATAA
TGCAACCCCT GGTGCCGAC
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| Protein sequence | MLAPLALLPL LSLMLPQASA DTRPGSLPHN LHHPYRRSLK RSITSDASSI NGESFDFVIA
GGGVAGLTLA ARLSEWSNVT VLCIEAGGDG SNYEDQIDIP GYSYLNSLTG TAYDWAYNTV
PQTDALDLTK YWPRGKGLGG SGAINGLFWG RASSIEYDAW ATLNPNGNET WNWEEVNKYI
KKSENLTAPP TDIQEKFGIV VNASAHGDDG PIQIGFSEYI FDEVAKWIPT WETLGLSGKD
LAGGSTHGAM ISTSTINMRN QTRSDSKAGY IDPLPPRSNL VILTEQQVTG VIFNGSTDAS
GNIVASGVTF QANSNSANYS VQANKEVLLA GGTVGSPQIL QLSGIGPKDL LSSLGIDTKI
DLPVGYNLQD HVSYSMYWST PQGTLTWSNL SASSTLQSEQ LAQYKSNFTG MWTYVNEAVG
YPSMSDIMQS SSSASTYAST VSSAIDGMVT NVTSWLDLPD TVATGLTSQY QIQQQWLTED
IGQLEIVLTL LGNGGNELGI QVALQHPFSR GTIFINSTDP FTQPNINPDY FGVGYDIDIM
AYGSEFARRL AAASPLSDVM ITETAPGSSV TGDSLATYTK QNCGTEYHPL GTCSMLPKNS
GGVVDTTLTV YGTSNLRVID TSIAPLQLSA HLMATTYGIA EKGADIIKKK YWYVDPVTSS
SATVAAATTS TEATTAAVGD ATDTAVTNIN QNNAESGSTL SSGAKIGIGV GVGVGAAAVL
AGLLLFFVMR KRNQKEDEKG WYGDRQEGWN PDAGDAYKEP GSAYPMADFD SHNSYASPTP
AFIGNHSRNQ SINTIATADL ASRTPMRNSS SFSYAAGGPG VGRTASPYRD DMSDDGNGQG
HVYQAPEAPA GQQATRGEQR YQPVNIR
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